HHsearch alignment for GI: 254780439 and conserved domain: PRK10446
>PRK10446 ribosomal protein S6 modification protein; Provisional.
Probab=99.73 E-value=7.2e-14 Score=127.63 Aligned_cols=276 Identities=17% Similarity=0.215 Sum_probs=198.3
Q ss_pred EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCCCEEECCCCHHHHHHHHHHHCCCEEEE
Q ss_conf 99997677542050546668889999999987978999748765010784513100433799999999998628988997
Q gi|254780439|r 9 TLLIIGAGPIVIGQACEFDYSGTQACKALKEEGYRIILVNSNPATIMTDPDLADATYTEPITPEVVAKIIEKERPDAILP 88 (1162)
Q Consensus 9 kvLviGsGpi~IGqa~EfDys~~qa~~alke~Gi~vVlVNsNpaTi~TD~~~aD~vY~ePlt~e~v~~Ii~~E~pDaIlp 88 (1162)
T Consensus 2 ki~iLs~~~~--------~yst~RL~eaa~~rGh~v~vidp~~~~~~i~~~~~~-v~~~g~---------~L~~~Davip 63 (300)
T PRK10446 2 KIAILSRDGT--------LYSCKRLREAAIQRGHLVEILDPLSCYMNINPAASS-IHYKGR---------KLPHFDAVIP 63 (300)
T ss_pred EEEEEECCCC--------CCHHHHHHHHHHHCCCEEEEEEHHHCEEEECCCCCE-EEECCE---------ECCCCCEEEE
T ss_conf 7999936997--------607999999999879959996148918982489864-998980---------8687888998
Q ss_pred CCCCCHHHHHHHHHHHCCCHHHHCCEEECCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 58870268888998875962882875714998999860588999999998789888620002344333332333333344
Q gi|254780439|r 89 TTGGQTALNTALSLKRMGVLDRYGVEMIGAKPETIDKAEDRSLFSKAMQNIPLATPKSILANATDIKEHDRKLHEEEREN 168 (1162)
Q Consensus 89 ~~GGqtalnl~~~L~e~gil~~~~v~~lG~~~~~I~~~edR~~F~~~l~~~gip~~~s~~~~~~~~~~~~~~~~~~~~~~ 168 (1162)
T Consensus 64 R~g~~~t~~~~~vLr---~lE~~Gv~vi-N~~~aI~~~~DKl~t~qlL~~~gip~P~T~~~~------------------ 121 (300)
T PRK10446 64 RIGTAITFYGTAALR---QFEMLGSYPL-NESVAIARARDKLRSMQLLARQGIDLPVTGIAH------------------ 121 (300)
T ss_pred CCCCCCCHHHHHHHH---HHHHCCCCEE-CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEC------------------
T ss_conf 267774558999999---9998899186-489999985769999999987597999889836------------------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC-CCCEEEEECCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 44444433332221111112334444444554448999999999871-99699941326786645111699999999998
Q gi|254780439|r 169 LKKTLSKEELDAALYALELKWNLEENDRKHRYICHAMAVAVQALDEI-GLPLIIRPSFTLGGTGGGIAYNRSEFLEIVEN 247 (1162)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ea~~~a~~i-GyPvivRps~~lGG~G~~iv~n~eeL~~~~~~ 247 (1162)
T Consensus 122 -----------------------------------~~~~~~~~i~~~gg~PvViKpl~Gs~G~GV~l~e~~~~~~~i~~~ 166 (300)
T PRK10446 122 -----------------------------------SPDDTSDLIDMVGGAPLVVKLVEGTQGIGVVLAETRQAAESVIDA 166 (300)
T ss_pred -----------------------------------CHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECHHHHHHHHHH
T ss_conf -----------------------------------999999999980899789996789886036997378999999998
Q ss_pred HHHHCCCCCEEEEEECCCCE--EEEEEEEEECCCCEEEEEECCC---CCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHH
Q ss_conf 99857998279866449978--9999999728998899963000---000100001013433732289889999999999
Q gi|254780439|r 248 GLHASPTTEVLIEESVLGWK--EYELEMMRDIKGNCIVVCSIEN---LDPMGVHTGDSITVAPALTLTDKEYQLMRNAAI 322 (1162)
Q Consensus 248 al~~s~~~~vlIeksl~g~k--EiE~eVirD~~gn~i~v~~~En---~dp~GiHtGDSi~vaP~qTL~d~~~q~LR~~a~ 322 (1162)
T Consensus 167 ~~~~--~~~~~iQeyI~~~~g~D~Rv~vvg---g~vvaam~R~~~~g~~rtN~~~Gg~~~~~---~l~~e~----~~la~ 234 (300)
T PRK10446 167 FRGL--NAHILVQEYIKEAQGCDIRCLVVG---DEVVAAIERRAKEGDFRSNLHRGGAASVA---SITPQE----REIAI 234 (300)
T ss_pred HHHC--CCCEEEEEECCCCCCCCEEEEEEC---CEEHHHEEEECCCCCEEEEEECCCEEEEC---CCCHHH----HHHHH
T ss_conf 8622--873775220255579867999999---86244389973788347777039776532---899999----99999
Q ss_pred HHHHHHCCCCCCCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHCCCHHHHHH
Q ss_conf 9998718345764689999558984999850444310357888763461476777
Q gi|254780439|r 323 AVLKEIGVESGGANVQFAVNPKNGKMVVIEMNPRVSRSSALASKATGFPIAKIAA 377 (1162)
Q Consensus 323 kI~r~lgi~vG~~nVQFAv~p~~~~~yvIEvNpR~sRssalaskatgypia~vaa 377 (1162)
T Consensus 235 ~a~~~lgl--~~~GVDii~~--~~g~~v~EVN~--~Pg~~gi~~~tgvdiA~~Ii 283 (300)
T PRK10446 235 KAARTMAL--DVAGVDILRA--NRGPLVMEVNA--SPGLEGIEKTTGIDIAGKMI 283 (300)
T ss_pred HHHHHHCC--CEEEEEEEEE--CCCCEEEEECC--CHHHHHHHHHHCCCHHHHHH
T ss_conf 99998699--6899999882--89988999938--74278898875989899999