>TIGR00514 accC acetyl-CoA carboxylase, biotin carboxylase; InterPro: IPR004549 This family represents the biotin carboxylase subunit found usually as a component of acetyl-CoA carboxylase. Acetyl-CoA carboxylase (6.4.1.2 from EC) is a heterohexamer of biotin carboxyl carrier protein, biotin carboxylase (6.3.4.14 from EC), and two subunits of carboxyl transferase in a 2:2 complex. In the first step of long-chain fatty acid synthesis, biotin carboxylase catalyses the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-coA. Homologous domains are found in eukaryotic forms of acetyl-CoA carboxylase and in a number of other carboxylases (e.g. pyruvate carboxylase). In some systems, the biotin carboxyl carrier protein and this protein (biotin carboxylase) may be shared by different carboxyltransferases. However, this model is not intended to identify the biotin carboxylase domain of propionyl-coA carboxylase. The model should hit the full length of proteins, except for chloroplast transit peptides in plants. If it hits a domain only of a longer protein, there may be a problem with the identification.; GO: 0016874 ligase activity.

Probab=100.00 E-value=0 Score=471.78 Aligned_cols=373 Identities=24% Similarity=0.316 Sum_probs=320.6 Q ss_pred CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCCC-EEECC-------CCHHHHHHHH Q ss_conf 569999767754205054666888999999998797899974876501078451310-04337-------9999999999 Q gi|254780439|r 7 LKTLLIIGAGPIVIGQACEFDYSGTQACKALKEEGYRIILVNSNPATIMTDPDLADA-TYTEP-------ITPEVVAKII 78 (1162) Q Consensus 7 ikkvLviGsGpi~IGqa~EfDys~~qa~~alke~Gi~vVlVNsNpaTi~TD~~~aD~-vY~eP-------lt~e~v~~Ii 78 (1162) T Consensus 2 ~~K~lIANRGEI-----------A~RIiRAC~ElGi~TVAVyS~aD~dalHV~LADEavCIGea~S~kSYL~IpnI~aAA 70 (451) T TIGR00514 2 LDKILIANRGEI-----------ALRIIRACKELGIATVAVYSTADRDALHVLLADEAVCIGEAPSAKSYLNIPNIIAAA 70 (451) T ss_pred CCEEEEECCHHH-----------HHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHH T ss_conf 854899526067-----------889999888649863986004413323434302530068622112441158899988 Q ss_pred HHHCCCEEEECCCCCHHHHHHHHHHHCCCH----HHHCCEEECCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCC Q ss_conf 862898899758870268888998875962----8828757149989998605889999999987898886200023443 Q gi|254780439|r 79 EKERPDAILPTTGGQTALNTALSLKRMGVL----DRYGVEMIGAKPETIDKAEDRSLFSKAMQNIPLATPKSILANATDI 154 (1162) Q Consensus 79 ~~E~pDaIlp~~GGqtalnl~~~L~e~gil----~~~~v~~lG~~~~~I~~~edR~~F~~~l~~~gip~~~s~~~~~~~~ 154 (1162) T Consensus 71 ~~tG~~AiHPGYG---------FLSENA~FAe~c~~~g~~FIGP~pe~Ir~MGDK~~A~~~mKkaGVP~VP--------- 132 (451) T TIGR00514 71 EITGADAIHPGYG---------FLSENADFAEICEDHGITFIGPSPEAIRLMGDKVTAKETMKKAGVPVVP--------- 132 (451) T ss_pred HHCCCCEECCCCC---------HHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEC--------- T ss_conf 7748807628877---------3443124788987388266678712011268868999999748876623--------- Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCC Q ss_conf 3333233333334444444433332221111112334444444554-448999999999871996999413267866451 Q gi|254780439|r 155 KEHDRKLHEEERENLKKTLSKEELDAALYALELKWNLEENDRKHRY-ICHAMAVAVQALDEIGLPLIIRPSFTLGGTGGG 233 (1162) Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~ea~~~a~~iGyPvivRps~~lGG~G~~ 233 (1162) T Consensus 133 ------------------------------------------GS~GP~~~~~~e~~~~A~~IGyPv~IKA~AGGGGRGmR 170 (451) T TIGR00514 133 ------------------------------------------GSDGPLVEDEEEAVRIAKEIGYPVIIKATAGGGGRGMR 170 (451) T ss_pred ------------------------------------------CCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCEEE T ss_conf ------------------------------------------88886310278899999747896899962589972258 Q ss_pred CCCCHHHHHHHH----HHHHHHCCCCCEEEEEECCCCEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEECCCCCC Q ss_conf 116999999999----9899857998279866449978999999972899889996300000010000101343373228 Q gi|254780439|r 234 IAYNRSEFLEIV----ENGLHASPTTEVLIEESVLGWKEYELEMMRDIKGNCIVVCSIENLDPMGVHTGDSITVAPALTL 309 (1162) Q Consensus 234 iv~n~eeL~~~~----~~al~~s~~~~vlIeksl~g~kEiE~eVirD~~gn~i~v~~~En~dp~GiHtGDSi~vaP~qTL 309 (1162) T Consensus 171 ~vR~~~El~~~~~~a~~EA~AAF~N~~VYiEKfienPRH~E~QVLAD~~GN~vyLgERDCSiQRR~QKllEEa--PsP~L 248 (451) T TIGR00514 171 VVREEDELVKLIKAARAEAAAAFNNDGVYIEKFIENPRHVEIQVLADKYGNVVYLGERDCSIQRRNQKLLEEA--PSPAL 248 (451) T ss_pred EECCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEECCCCCCHHCCCCCEEEEC--CCCCC T ss_conf 8628689999999999999740287962786333699407999875178887897121462000465446546--88877 Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCE-EEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCC- Q ss_conf 98899999999999998718345764689999558984-9998504443103578887634614767776413446101- Q gi|254780439|r 310 TDKEYQLMRNAAIAVLKEIGVESGGANVQFAVNPKNGK-MVVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDE- 387 (1162) Q Consensus 310 ~d~~~q~LR~~a~kI~r~lgi~vG~~nVQFAv~p~~~~-~yvIEvNpR~sRssalaskatgypia~vaakl~~G~~L~e- 387 (1162) T Consensus 249 t~ElR~~~G~~Av~aA~~iGY-~GaGTvEFLld-~~~~rFYFmEMNTRIQVEHPVTEmvtGvDL~keQirvA~G~~L~~k 326 (451) T TIGR00514 249 TSELREKMGDAAVKAAKSIGY-TGAGTVEFLLD-KNGQRFYFMEMNTRIQVEHPVTEMVTGVDLIKEQIRVAAGEKLSLK 326 (451) T ss_pred CHHHHHHHHHHHHHHHHHCCC-EECCEEEEEEE-CCCCEEEEEEECCEEEEEECCEEEEECHHHHHHHHHHHCCCCCCCC T ss_conf 889999998999999986498-00351688862-5887357765176021110320146002578889987378956643 Q ss_pred ---C-------CCCCCCCCCCCCCCCCCCEEEEEEE------ECCCCCCCCCCCCCCCCCCC-CCHHHHCCCCHHHHHHH Q ss_conf ---3-------5775677776665776776898544------20121147766666773100-10022226768999998 Q gi|254780439|r 388 ---L-------GNDITGGKTPASFEPSIDYIVTKIP------RFTFEKFPGSDVTLTTSMKS-VGEVMAIGRTFAESLQK 450 (1162) Q Consensus 388 ---i-------~~~~~~~~~~a~~Ep~ldyv~vK~p------~f~f~kf~~~~~~Lgt~MkS-~GEvm~iGr~f~eA~~K 450 (1162) T Consensus 327 Qe~v~~~GHaieCRINAEDP~~~F~PsPG~i~~ylpPGG~gVR~DSh--~Y~gY~iPPyYDSmIaKlI~~G~~R~~AI~r 404 (451) T TIGR00514 327 QEDVKLRGHAIECRINAEDPIKNFLPSPGRITSYLPPGGPGVRVDSH--VYSGYTIPPYYDSMIAKLITYGKTREEAIAR 404 (451) T ss_pred CCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEECCCE--ECCCCCCCCCCHHCCEEEEECCCCHHHHHHH T ss_conf 11479998899865145587877868885015546879752201003--4487876984020201246405898899999 Q ss_pred HHHHCC Q ss_conf 997503 Q gi|254780439|r 451 ALRGLE 456 (1162) Q Consensus 451 Alrsle 456 (1162) T Consensus 405 MKrAL~ 410 (451) T TIGR00514 405 MKRALS 410 (451) T ss_pred HHHHHH T ss_conf 988754

HHsearch alignment for GI: 254780439 and conserved domain: TIGR00514