HHsearch alignment for GI: 254780439 and conserved domain: TIGR02068
>TIGR02068 cya_phycin_syn cyanophycin synthetase; InterPro: IPR011810 Cyanophycin is an insoluble storage polymer for carbon, nitrogen, and energy, found in most Cyanobacteria. The polymer has a backbone of L-aspartic acid, with most Asp side chain carboxyl groups attached to L-arginine. The polymer is made by this enzyme, cyanophycin synthetase, and degraded by cyanophycinase. Heterologously expressed cyanophycin synthetase in Escherichia coli produces a closely related, water-soluble polymer with some Arg replaced by Lys. It is unclear whether enzymes that produce soluble cyanophycin-like polymers in vivo in non-Cyanobacterial species should be designated as cyanophycin synthetase itself or as a related enzyme. Cyanophycin synthesis is analogous to polyhydroxyalkanoic acid (PHA) biosynthesis, except that PHA polymers lack nitrogen and may be made under nitrogen-limiting conditions .; GO: 0005524 ATP binding, 0016874 ligase activity, 0009059 macromolecule biosynthetic process.
Probab=98.74 E-value=7.1e-08 Score=80.15 Aligned_cols=384 Identities=20% Similarity=0.240 Sum_probs=203.6
Q ss_pred EEEEECCHHHHHHHHHHHCCCC-CCCEEEEECCCHHHHHHHHHHHHCCCEEEE-----CCCCHHHHCCCHHHHHHHHHHC
Q ss_conf 7984167889999998748567-822799844512466898888875983861-----2752033102867899988870
Q gi|254780439|r 675 LYFESLTEEDILEILRVEQQKG-ELVGIIVQFGGQTPLKLSKILEKNQIPILG-----TQPDSIDLAEDRDRFQKLLMEL 748 (1162)
Q Consensus 675 LYFEplt~E~V~~I~~~E~p~g-~~~~vi~q~gGqt~~~la~~L~~~gv~ilG-----ts~~~Id~aEDR~~F~~ll~~l 748 (1162)
T Consensus 160 ~~LGPST~~Iv~eA~~R~IP~~rL~~g~~vqlGYG~----------~qkri~at~td~Ts~iav~iA~DK~lTK~iL~~~ 229 (876)
T TIGR02068 160 ASLGPSTAAIVKEAEKRGIPYMRLSAGSLVQLGYGS----------KQKRIQATETDRTSAIAVEIACDKDLTKKILKAA 229 (876)
T ss_pred CCCCCCHHHHHHHHHHCCCCEEEECCCCEEECCCCC----------CCEEEEEECCCCCCEEEHHHHCCHHHHHHHHHHC
T ss_conf 367987789999997378986873376445605775----------4303432002576501012223637899999847
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHCC-CCEEEECCCCCCCCCCEE-ECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 986685421121566555655369-716751344445654125-548999999999752101322111122333333334
Q gi|254780439|r 749 DLNQPRNGISHSVEHARLIACEIG-FPLLIRPSYVLGGRAMQI-VYSENMLQDYLLDTLPGLVSEEIKRQYPNDKTGQIN 826 (1162)
Q Consensus 749 ~i~~p~~~~a~s~eea~~~a~~iG-yPVLVRPSyVLGG~~M~I-v~~~~eL~~yl~~a~~~~~~~~~~~~~~~~~~~~~~ 826 (1162)
T Consensus 230 GvPVP~G~~~~~~~~a~~aa~~~GG~PvViKP~DGn~GrGv~~ni~~r~e~e~AY~~A~--------------------- 288 (876)
T TIGR02068 230 GVPVPEGTVVQSAEEAWEAAEDLGGYPVVIKPYDGNHGRGVTINIETRDEIESAYEAAK--------------------- 288 (876)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCHHHHHHHHHHHH---------------------
T ss_conf 89888873667789999999971899689951779987437840777488999999998---------------------
Q ss_pred CCCCCCCEEEEEECCCCEEEEEEEEEECCCEEE-EEEECCCCHHCCCC---------------CCE-EEEECCCCCCHHH
Q ss_conf 557777456702201201001010230798499-98520110215245---------------762-7981686689999
Q gi|254780439|r 827 TLLGTHPLLFDSYLSDAMEIDVDALCQNDQVIV-VGIIEHIEEAGIHS---------------GDS-ACSLPSRSLSQQL 889 (1162)
Q Consensus 827 ~vs~~~pVlIdkfl~~a~EiEVDai~Dg~~v~I-~gimEHiE~aGVHS---------------GDS-~~v~PpqsLs~~~ 889 (1162)
T Consensus 289 ~~Sk~~~ViVEr~i~-G~dhRlLVVg~-k~VAvA~R~PA~ViGDG~hTi~eLiG~~~N~DP~RG~Gh~~~Ltki~~D~~~ 366 (876)
T TIGR02068 289 EESKTSEVIVERYIK-GRDHRLLVVGG-KLVAVAERVPAHVIGDGVHTIEELIGEQINKDPLRGDGHDKPLTKIRLDSVA 366 (876)
T ss_pred HCCCCCEEEEEEEEC-CCCEEEEEECC-EEEEEECCCCCEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEHHHHH
T ss_conf 607866068987642-76238999989-6899861888868838720076640576467778888667788834330799
Q ss_pred HHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEE-ECC--------CCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCC
Q ss_conf 999999999998741335762478851288599985-244--------44563045677739889999999985972100
Q gi|254780439|r 890 KDELISQTKALAGALNVIGLINVQYAIKDGKIYILE-VNP--------RASRTVPFIAKAIGFPVAKVAARIIAGESLDA 960 (1162)
Q Consensus 890 ~~~i~~~t~~ia~~L~v~G~~NIQfa~kd~~iYVIE-vNp--------RaSRtvPfvSKatG~pl~~iAt~v~lG~~L~~ 960 (1162)
T Consensus 367 ~~~L~kqG~~ld-----------sVp~kG~~V~Lr~~ANLSTGG~A~DrTDeiHP~~~~~-----a~~aAk~-iGLDiaG 429 (876)
T TIGR02068 367 KLVLAKQGLTLD-----------SVPAKGRIVYLRATANLSTGGVAIDRTDEIHPENIAI-----AVRAAKI-IGLDIAG 429 (876)
T ss_pred HHHHHHCCCCCC-----------CHHHCCCEEEEECCCCCCCCCEEEECCCCCCHHHHHH-----HHHHHHE-EEEEECC
T ss_conf 999985497511-----------5454097888632477445873162257538458999-----9875200-0001212
Q ss_pred CCCC-CCCCCCCCCCCEEEEEEECCCHHHCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCEE-EEEE
Q ss_conf 2466-6677776668738997203883445999867077563101377741999999999999838879887259-9996
Q gi|254780439|r 961 SIAA-YGKRPDLSQIKHFAVKESVFPFNKFPGVDILLGPEMRSTGEVIGIDQDFPLAFAKSQLGIGVDLPHEGTV-FVSV 1038 (1162)
Q Consensus 961 ~~~~-~~~~~~~~~~~~~aVK~pvFsF~k~~g~D~~LGpEMkSTGEVmgig~~~~eA~~Ka~~a~g~~lP~~g~v-fisv 1038 (1162)
T Consensus 430 ~D~v~~di~~PL~~~~G~iVEV-----NAaPGlrMH~~PS~-------G~pR~Va~Ai~d~LF----P~~~~grIPiV~v 493 (876)
T TIGR02068 430 VDVVTEDISKPLRDTDGAIVEV-----NAAPGLRMHLAPSQ-------GKPRNVAKAIVDMLF----PEEDDGRIPIVAV 493 (876)
T ss_pred EEECCCCCCCCHHHCCCEEEEE-----ECCCCHHHCCCCCC-------CCCCCCCHHHHHHCC----CCCCCCCEEEEEE
T ss_conf 2200310003745459729998-----56766344467777-------469871026875228----8878983448887
Q ss_pred CCHH-HHHHHH-HHHHHHHCCCEEEEEHHHHHHHHHCCCEEEEEECCCCCCC-CHHHHHHCCCEEEEE-ECCCCCCCCCC
Q ss_conf 4412-899999-9999998898999938889999987981569750568781-078898679854999-67899852311
Q gi|254780439|r 1039 RDAD-KKRIVP-IIQNFKKLGFKIMATEGTARFLESHGLETQKINKVLEGRP-HIEDAISNRQVHLVI-NTTEGKKAIED 1114 (1162)
Q Consensus 1039 ~d~d-K~~~~~-~a~~l~~lGf~l~AT~GTa~~L~~~Gi~~~~v~k~~e~~~-~i~d~i~~~~i~lVI-Nt~~~~~~~~d 1114 (1162)
T Consensus 494 TGTNGKTt~~RL~Ahil~~~G~~vG~T~tDG~Yi~~-----~~v~~GDntGP~SAr~~L~d~~VdaAVLEtarGG-iLR~ 567 (876)
T TIGR02068 494 TGTNGKTTTTRLVAHILKQTGKVVGMTTTDGVYIGK-----KLVEKGDNTGPKSARRILADPTVDAAVLETARGG-ILRE 567 (876)
T ss_pred ECCCCCHHHHHHHHHHHHHCCCEEEEEECCCEEECC-----EEEECCCCCCHHHHHHCCCCCCEEEEEEECCCCC-CCCC
T ss_conf 268983557889999998569827642037677557-----6662478987157301227888018998627872-2066
Q ss_pred HHHHHHHHHHCCCCEEECHH
Q ss_conf 08999999970997994599
Q gi|254780439|r 1115 SKSLRRATLIRKIPYYTTIA 1134 (1162)
Q Consensus 1115 g~~iRr~Ai~~~ip~~T~~~ 1134 (1162)
T Consensus 568 GLafD----~c~VGvVtNi~ 583 (876)
T TIGR02068 568 GLAFD----RCDVGVVTNIA 583 (876)
T ss_pred CCCCC----CCCCEEEEECC
T ss_conf 50103----21416898337