HHsearch alignment for GI: 254780439 and conserved domain: TIGR02712
>TIGR02712 urea_carbox urea carboxylase; InterPro: IPR014084 Members of this family are ATP-dependent urea carboxylases, including characterised members from Oleomonas sagaranensis (alpha class Proteobacterium) and yeasts such as Saccharomyces cerevisiae (Baker's yeast). The allophanate hydrolase domain of the yeast enzyme is not included in this entry and is represented by an adjacent gene in Oleomonas sagaranensis. The fusion of urea carboxylase and allophanate hydrolase is designated urea amidolyase. The enzyme from O. sagaranensis was shown to be highly active on acetamide and formamide as well as urea..
Probab=100.00 E-value=0 Score=424.82 Aligned_cols=375 Identities=20% Similarity=0.251 Sum_probs=323.2
Q ss_pred CEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCCCEE-ECC-------CCHHHHHHHHH
Q ss_conf 6999976775420505466688899999999879789997487650107845131004-337-------99999999998
Q gi|254780439|r 8 KTLLIIGAGPIVIGQACEFDYSGTQACKALKEEGYRIILVNSNPATIMTDPDLADATY-TEP-------ITPEVVAKIIE 79 (1162)
Q Consensus 8 kkvLviGsGpi~IGqa~EfDys~~qa~~alke~Gi~vVlVNsNpaTi~TD~~~aD~vY-~eP-------lt~e~v~~Ii~ 79 (1162)
T Consensus 2 ~~vLiANRGEI-----------A~RiirTL~~lgi~sVAvYS~aD~~s~HV~~AD~A~~Lg~~~A~esYL~~dkil~~Ak 70 (1226)
T TIGR02712 2 KTVLIANRGEI-----------AVRIIRTLRKLGIRSVAVYSDADRASQHVLDADEAVCLGGATAAESYLDIDKILAIAK 70 (1226)
T ss_pred CEEEEECCHHH-----------HHHHHHHHHHCCCCEEEEECCCCCCCCCHHHCCCEECCCCCCHHHHHCCHHHHHHHHH
T ss_conf 65677644379-----------9999999877186379863210021578236050260589541322214789999997
Q ss_pred HHCCCEEEECCCCCHHHHHHHHHHHCCCH----HHHCCEEECCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf 62898899758870268888998875962----88287571499899986058899999999878988862000234433
Q gi|254780439|r 80 KERPDAILPTTGGQTALNTALSLKRMGVL----DRYGVEMIGAKPETIDKAEDRSLFSKAMQNIPLATPKSILANATDIK 155 (1162)
Q Consensus 80 ~E~pDaIlp~~GGqtalnl~~~L~e~gil----~~~~v~~lG~~~~~I~~~edR~~F~~~l~~~gip~~~s~~~~~~~~~ 155 (1162)
T Consensus 71 ~tGA~AI~PGYG---------FLSENA~FA~~C~~aGI~FvGPtpe~ir~fGLKHtAR~lA~~aGVPL~PGTgL------ 135 (1226)
T TIGR02712 71 KTGAQAIHPGYG---------FLSENAAFAEACEAAGIVFVGPTPEQIRKFGLKHTARELAEAAGVPLLPGTGL------ 135 (1226)
T ss_pred HCCCCEEECCCC---------CCCCCHHHHHHHHHCCCEEECCCHHHHHHCCCCHHHHHHHHHCCCCCCCCCHH------
T ss_conf 558938745887---------23578779989984795787787066744383256899999668898885155------
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC
Q ss_conf 33323333333444444443333222111111233444444455444899999999987199699941326786645111
Q gi|254780439|r 156 EHDRKLHEEERENLKKTLSKEELDAALYALELKWNLEENDRKHRYICHAMAVAVQALDEIGLPLIIRPSFTLGGTGGGIA 235 (1162)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ea~~~a~~iGyPvivRps~~lGG~G~~iv 235 (1162)
T Consensus 136 ----------------------------------------------L~sl~eA~~~A~~IGYPVMlKSTAGGGGIGl~~c 169 (1226)
T TIGR02712 136 ----------------------------------------------LESLDEALEAAKEIGYPVMLKSTAGGGGIGLQKC 169 (1226)
T ss_pred ----------------------------------------------HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC
T ss_conf ----------------------------------------------8779999999864699547987078765245111
Q ss_pred CCHHHHHHHHHH----HHHHCCCCCEEEEEECCCCEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCH
Q ss_conf 699999999998----9985799827986644997899999997289988999630000001000010134337322898
Q gi|254780439|r 236 YNRSEFLEIVEN----GLHASPTTEVLIEESVLGWKEYELEMMRDIKGNCIVVCSIENLDPMGVHTGDSITVAPALTLTD 311 (1162)
Q Consensus 236 ~n~eeL~~~~~~----al~~s~~~~vlIeksl~g~kEiE~eVirD~~gn~i~v~~~En~dp~GiHtGDSi~vaP~qTL~d 311 (1162)
T Consensus 170 ~~~~eL~~aFe~Vkrlg~~~F~daGVFlErfv~~ARHvEVQifGDG~G~v~aLGeRDCSLQRRNQKVvEET--PAP~LP~ 247 (1226)
T TIGR02712 170 DNAAELAEAFETVKRLGESFFGDAGVFLERFVENARHVEVQIFGDGKGKVVALGERDCSLQRRNQKVVEET--PAPNLPE 247 (1226)
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHCCCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCEEEEC--CCCCCCH
T ss_conf 89899999999989988632363514340320378428998752697336997116754444566558727--7468648
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf 89999999999999871834576468999955898499985044431035788876346147677764134461013577
Q gi|254780439|r 312 KEYQLMRNAAIAVLKEIGVESGGANVQFAVNPKNGKMVVIEMNPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELGND 391 (1162)
Q Consensus 312 ~~~q~LR~~a~kI~r~lgi~vG~~nVQFAv~p~~~~~yvIEvNpR~sRssalaskatgypia~vaakl~~G~~L~ei~~~ 391 (1162)
T Consensus 248 ~~R~~L~~AA~~Lg~~V~Yr-SAGTVEFiYD~~~d~FYFLEVNTRLQVEHPvTE~VtGlDLVEWM~r~AAg~~p~~~~~~ 326 (1226)
T TIGR02712 248 ETRAALLAAAEKLGEAVNYR-SAGTVEFIYDEARDEFYFLEVNTRLQVEHPVTEMVTGLDLVEWMVRIAAGELPDFDSLN 326 (1226)
T ss_pred HHHHHHHHHHHHHHHHHCCC-CCCEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCCHHHCC
T ss_conf 99999999999999971876-37604774022108712113234111335730178464089899997168888852443
Q ss_pred C------C--C---------CCCCCCCCCCCCE-EEEEEEECCCCCCCCCCCC--CCCCCCC-----CCHHHHCCCCHHH
Q ss_conf 5------6--7---------7776665776776-8985442012114776666--6773100-----1002222676899
Q gi|254780439|r 392 I------T--G---------GKTPASFEPSIDY-IVTKIPRFTFEKFPGSDVT--LTTSMKS-----VGEVMAIGRTFAE 446 (1162)
Q Consensus 392 ~------~--~---------~~~~a~~Ep~ldy-v~vK~p~f~f~kf~~~~~~--Lgt~MkS-----~GEvm~iGr~f~e 446 (1162)
T Consensus 327 ~~~~~~l~p~G~aiEaRvYAEnP~k~F~PSpG~Lt~V~FP~~~G~~-~RvDTWV~~Gtevsp~YDPmlAKiIv~g~~R~~ 405 (1226)
T TIGR02712 327 IEIFDNLTPRGAAIEARVYAENPAKNFQPSPGLLTEVQFPDDGGKA-VRVDTWVETGTEVSPEYDPMLAKIIVHGKDRED 405 (1226)
T ss_pred CCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCE-EEEECEECCCCEECCCCCCCEEEEEECCCCHHH
T ss_conf 0003578875038999984407767772698606887727888953-787021127835677658742446643679789
Q ss_pred HHHHHHHHCCCC
Q ss_conf 999899750378
Q gi|254780439|r 447 SLQKALRGLETG 458 (1162)
Q Consensus 447 A~~KAlrsle~~ 458 (1162)
T Consensus 406 A~~kL~~AL~~T 417 (1226)
T TIGR02712 406 AIAKLSQALDET 417 (1226)
T ss_pred HHHHHHHHHHHC
T ss_conf 999999887301