HHsearch alignment for GI: 254780439 and conserved domain: cd01422
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=97.88 E-value=0.00019 Score=53.07 Aligned_cols=105 Identities=24% Similarity=0.368 Sum_probs=83.5
Q ss_pred EEECCHHHHHHHHHHHHHHHC--CCEEEEEHHHHHHHHHC-CCEEEEEECC-CCCCCCHHHHHHCCCEEEEEECCC--CC
Q ss_conf 996441289999999999988--98999938889999987-9815697505-687810788986798549996789--98
Q gi|254780439|r 1036 VSVRDADKKRIVPIIQNFKKL--GFKIMATEGTARFLESH-GLETQKINKV-LEGRPHIEDAISNRQVHLVINTTE--GK 1109 (1162)
Q Consensus 1036 isv~d~dK~~~~~~a~~l~~l--Gf~l~AT~GTa~~L~~~-Gi~~~~v~k~-~e~~~~i~d~i~~~~i~lVINt~~--~~ 1109 (1162)
T Consensus 4 LIAHD~kK~~lv~f~~~~~~~L~~~~L~ATgtTG~~i~e~~~L~V~~~~sGplGGDqQIga~I~~g~id~viFf~DPl~~ 83 (115)
T cd01422 4 LIAHDNKKEDLVEFVKQHQELLSRHRLVATGTTGLLIQEATGLTVNRMKSGPLGGDQQIGALIAEGEIDAVIFFRDPLTA 83 (115)
T ss_pred EEECCCCHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf 98345665999999999999970796686400999999864387688557996689999999981998889984289877
Q ss_pred CC-CCCHHHHHHHHHHCCCCEEECHHHHHHHH
Q ss_conf 52-31108999999970997994599999999
Q gi|254780439|r 1110 KA-IEDSKSLRRATLIRKIPYYTTIAGADAVF 1140 (1162)
Q Consensus 1110 ~~-~~dg~~iRr~Ai~~~ip~~T~~~~a~a~~ 1140 (1162)
T Consensus 84 ~ph~~Di~aLlRlc~v~niP~AtN~aTAe~li 115 (115)
T cd01422 84 QPHEPDVKALLRLCDVYNIPLATNRSTADAII 115 (115)
T ss_pred CCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHC
T ss_conf 99970299999999861961217998898849