HHsearch alignment for GI: 254780439 and conserved domain: pfam01488

>pfam01488 Shikimate_DH Shikimate / quinate 5-dehydrogenase. This family contains both shikimate and quinate dehydrogenases. Shikimate 5-dehydrogenase catalyses the conversion of shikimate to 5-dehydroshikimate. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites 3-dehydroquinate and dehydroshikimate.
Probab=92.35  E-value=0.17  Score=29.54  Aligned_cols=73  Identities=25%  Similarity=0.396  Sum_probs=46.9

Q ss_pred             CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCC-EEEEECCCCCEEECCCCCCCCEE---ECCCCHHHHHHHHHHHC
Q ss_conf             569999767754205054666888999999998797-89997487650107845131004---33799999999998628
Q gi|254780439|r    7 LKTLLIIGAGPIVIGQACEFDYSGTQACKALKEEGY-RIILVNSNPATIMTDPDLADATY---TEPITPEVVAKIIEKER   82 (1162)
Q Consensus         7 ikkvLviGsGpi~IGqa~EfDys~~qa~~alke~Gi-~vVlVNsNpaTi~TD~~~aD~vY---~ePlt~e~v~~Ii~~E~   82 (1162)
T Consensus        12 ~~~vlVIGaG~~-----------~~~~~~~L~~~g~~~i~v~nRt~~ka~---~la~~~~~~~~~~~~~~~l~~~l--~~   75 (134)
T pfam01488        12 GKKVLLIGAGEM-----------ARLAAKHLLSKGAKKITIANRTLEKAK---ELAEEFGGEEVEALPLDELEELL--AE   75 (134)
T ss_pred             CCEEEEECCCHH-----------HHHHHHHHHHCCCCEEEEECCCHHHHH---HHHHHCCCCCEEEEECHHHHHHH--HH
T ss_conf             898999996099-----------999999999759988999547578999---99998499725898513544136--31


Q ss_pred             CCEEEECCCCCHH
Q ss_conf             9889975887026
Q gi|254780439|r   83 PDAILPTTGGQTA   95 (1162)
Q Consensus        83 pDaIlp~~GGqta   95 (1162)
T Consensus        76 ~DivI~aT~s~~~   88 (134)
T pfam01488        76 ADIVISATSAPTP   88 (134)
T ss_pred             CCEEEEECCCCCC
T ss_conf             9999992599973