HHsearch alignment for GI: 254780439 and conserved domain: pfam06849
>pfam06849 DUF1246 Protein of unknown function (DUF1246). This family represents the N-terminus of a number of hypothetical archaeal proteins of unknown function.
Probab=95.20 E-value=0.11 Score=31.27 Aligned_cols=109 Identities=20% Similarity=0.345 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHHCCCCEEEE-ECCCCCCCCCCCCCCEEEEEE----CCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHH
Q ss_conf 18999999999659806996-068652112324586379841----6788999999874856782279984451246689
Q gi|254780439|r 639 YCCCHASFSLKEAGFETIMI-NCNPETVSTDYDIADRLYFES----LTEEDILEILRVEQQKGELVGIIVQFGGQTPLKL 713 (1162)
Q Consensus 639 y~~v~a~~aLr~~G~~tImI-N~NPETVSTDyd~sDrLYFEp----lt~E~V~~I~~~E~p~g~~~~vi~q~gGqt~~~l 713 (1162)
T Consensus 7 HSALqIl~GAK~EGF~Tv~vc~~gr~~~Y~~f~~~De~iv~d~f~di~~~~~q~~L~~~N------~I~IPhgSfv~Y~G 80 (124)
T pfam06849 7 HSALQILDGAKDEGFRTVAVCQKGREKFYRRFPFVDEFIVVDKFKDILDEEVQQKLRENN------AIFIPHGSFVAYVG 80 (124)
T ss_pred CHHHHHHHHHHHCCCCEEEEEECCCCCHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHCC------EEEECCCCEEEEEC
T ss_conf 039899723887399578998179752133268673799956589987299999999889------79974888467655
Q ss_pred HHHHH-HCCCEEEECCCCHHHHCC-CHHHHHHHHHHCCCCCCCC
Q ss_conf 88888-759838612752033102-8678999888709866854
Q gi|254780439|r 714 SKILE-KNQIPILGTQPDSIDLAE-DRDRFQKLLMELDLNQPRN 755 (1162)
Q Consensus 714 a~~L~-~~gv~ilGts~~~Id~aE-DR~~F~~ll~~l~i~~p~~ 755 (1162)
T Consensus 81 ~~~ie~~~~VP~FGNR--~lLrwEseR~~~~~lLe~Agi~~Pk~ 122 (124)
T pfam06849 81 YDRVENEFKVPIFGNR--NLLRWESERDKERKLLEKAGIRYPKK 122 (124)
T ss_pred HHHHHHCCCCCEECCH--HHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 8998602788700478--88887653677999999769999835