HHsearch alignment for GI: 254780439 and conserved domain: smart00851
>smart00851 MGS MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in Carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. This family also includes inosicase. The known structures in this family show a common phosphate binding site PUBMED:10526357.
Probab=99.77 E-value=8.4e-19 Score=166.69 Aligned_cols=87 Identities=41% Similarity=0.536 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCEE-EEEECCCCCCCCHHHHHHCCCEEEEEECCC--CCCCCCCHHHHHHH
Q ss_conf 999999999988989999388899999879815-697505687810788986798549996789--98523110899999
Q gi|254780439|r 1045 RIVPIIQNFKKLGFKIMATEGTARFLESHGLET-QKINKVLEGRPHIEDAISNRQVHLVINTTE--GKKAIEDSKSLRRA 1121 (1162)
Q Consensus 1045 ~~~~~a~~l~~lGf~l~AT~GTa~~L~~~Gi~~-~~v~k~~e~~~~i~d~i~~~~i~lVINt~~--~~~~~~dg~~iRr~ 1121 (1162)
T Consensus 1 ~~~~~ak~l~~lGf~l~AT~GTa~~L~~~Gi~v~~l~~ki~~g~~~i~~~i~~~~IdlVInt~~~~~~~~~~d~~~iRr~ 80 (90)
T smart00851 1 GLVELAKRLAELGFELVATGGTAKFLREAGLPVKTLHPKVHGGILAILDLIKNGEIDLVINTLYPLGAQPHEDGKALRRA 80 (90)
T ss_pred CHHHHHHHHHHCCCEEEECCHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEEEEECCCCCCHHHHCCCCHHHH
T ss_conf 96899999998899899812589999975997104302443561048998197887999984687632365358889999
Q ss_pred HHHCCCCEEE
Q ss_conf 9970997994
Q gi|254780439|r 1122 TLIRKIPYYT 1131 (1162)
Q Consensus 1122 Ai~~~ip~~T 1131 (1162)
T Consensus 81 a~~~~Ip~~T 90 (90)
T smart00851 81 AENIDIPGAT 90 (90)
T ss_pred HHCCCCCCCC
T ss_conf 8808988709