RPSBLAST alignment for GI: 254780440 and conserved domain: TIGR01461
>gnl|CDD|130528 TIGR01461, greB, transcription elongation factor GreB. The GreA and GreB transcription elongation factors enable to continuation of RNA transcription past template-encoded arresting sites. Among the Proteobacteria, distinct clades of GreA and GreB are found. GreB differs functionally in that it releases larger oligonucleotides. This model describes proteobacterial GreB. Length = 156
Score = 109 bits (273), Expect = 4e-25
Identities = 54/152 (35%), Positives = 91/152 (59%), Gaps = 1/152 (0%)
Query: 7 VTSKGFDKIQQELRWRQQEERPRIIKAISEARAYGDLSENAEYQAAKELQNLNEGRMAEL 66
+T +G++K++QEL + +EERP + + ++ A + GD SENA+YQ K+ + R+ L
Sbjct: 5 ITPEGYEKLKQELNYLWREERPEVTQKVTWAASLGDRSENADYQYGKKRLREIDRRVRFL 64
Query: 67 ENIITRAEVIDISTMSGDRIAFGATVSLVEKNSGDKKNYQIVGDQEADVQSGLVSISSPI 126
+ +V+D S ++ FGA V L E + G ++IVG E D + +SI SP+
Sbjct: 65 TKRLENLKVVDYSPQQEGKVFFGAWVEL-ENDDGVTHRFRIVGYDEIDGRKNYISIDSPL 123
Query: 127 ARALIGKELGDIISVNAPGGEKTYEILQVLWI 158
ARAL+ KE+GD + VN P GE ++ + + ++
Sbjct: 124 ARALLKKEVGDEVVVNTPAGEASWYVNAIEYV 155