HHsearch alignment for GI: 254780442 and conserved domain: TIGR01418
>TIGR01418 PEP_synth phosphoenolpyruvate synthase; InterPro: IPR006319 This family represents phosphoenolpyruvate synthase; also called pyruvate,water dikinase and PEP synthase. The member from Methanococcus jannaschii contains a large intein. This enzyme generates phosphoenolpyruvate (PEP) from pyruvate, hydrolyzing ATP to AMP and releasing inorganic phosphate in the process. The enzyme shows extensive homology to other enzymes that use PEP as substrate or product. This enzyme may provide PEP for gluconeogenesis, for PTS-type carbohydrate transport systems, or for other processes. ; GO: 0008986 pyruvate water dikinase activity, 0006094 gluconeogenesis.
Probab=95.54 E-value=0.24 Score=29.57 Aligned_cols=124 Identities=25% Similarity=0.344 Sum_probs=95.3
Q ss_pred EECCCCCCCCHHHHHHHHHHHC-------CCCEEEEEECCHHHHHHHHHHHHH-HHEEEEECCCCC-------------H
Q ss_conf 2505855773479999986200-------343355532785663117888753-312475222200-------------2
Q gi|254780442|r 190 WVALSFIQSADDLLEIRKIISQ-------NKIGLMSKIEKPRAIEYASEIIQL-SDAVMVARGDLG-------------V 248 (480)
Q Consensus 190 ~ialSfVr~~~di~~~r~~l~~-------~~~~IiaKIE~~~al~nl~eI~~~-sDgimiaRGDLg-------------~ 248 (480)
T Consensus 724 ~vMiPFvRT~~E~~rv~~im~~~GL~~g~nGl~~~vM~E~PsnvlLAd~f~~~GfDGFSiGSNDLTQLTLgvDRDSelVA 803 (877)
T TIGR01418 724 EVMIPFVRTPEEGKRVLEIMAEEGLKRGKNGLEVYVMCEVPSNVLLADEFAKLGFDGFSIGSNDLTQLTLGVDRDSELVA 803 (877)
T ss_pred EECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCHHHH
T ss_conf 11357548889999999999972888477855799988356899999989850877156575168776642010431433
Q ss_pred HCC--H---HHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCC-HHHHHHHHHHHHCCCCEEEECCCCCCCCCHHH
Q ss_conf 158--7---67368999999998513983998057678888288984-03477899998519968998144435446589
Q gi|254780442|r 249 EMA--L---ELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPT-RAEVSDVATAVFEEADAIMLSAETASGSYPVD 322 (480)
Q Consensus 249 e~~--~---e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PT-RaEv~Dvanav~dG~D~imLs~ETa~G~yP~~ 322 (480)
T Consensus 804 ~lGYFDErn~AVL~li~~~I~aAk~~G~~vgICGQA---------PSDyPe~vef--LVe~GIDSiSlN--------PDa 864 (877)
T TIGR01418 804 HLGYFDERNPAVLRLIEMAIKAAKEHGKKVGICGQA---------PSDYPEVVEF--LVEEGIDSISLN--------PDA 864 (877)
T ss_pred HCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCC---------CCCHHHHHHH--HHHCCCCEEEEC--------CCC
T ss_conf 037775768799999999999998739969870688---------8873899999--985498769855--------401
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999887
Q gi|254780442|r 323 AVRTMSLVAS 332 (480)
Q Consensus 323 ~v~~~~~i~~ 332 (480)
T Consensus 865 V~~t~~~VA~ 874 (877)
T TIGR01418 865 VLKTRLQVAE 874 (877)
T ss_pred CHHHHHHHHH
T ss_conf 0889999976