HHsearch alignment for GI: 254780442 and conserved domain: cd04730

>cd04730 NPD_like 2-Nitropropane dioxygenase (NPD), one of the nitroalkane oxidizing enzyme families, catalyzes oxidative denitrification of nitroalkanes to their corresponding carbonyl compounds and nitrites. NDP is a member of the NAD(P)H-dependent flavin oxidoreductase family that reduce a range of alternative electron acceptors. Most use FAD/FMN as a cofactor and NAD(P)H as electron donor. Some contain 4Fe-4S cluster to transfer electron from FAD to FMN.
Probab=94.09  E-value=0.55  Score=26.95  Aligned_cols=110  Identities=21%  Similarity=0.324  Sum_probs=74.5

Q ss_pred             HHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHEEEEEC----CCCCHH-C
Q ss_conf             77899887348853250585577347999998620034335553278566311788875331247522----220021-5
Q gi|254780442|r  176 REDLHAALQTCEVDWVALSFIQSADDLLEIRKIISQNKIGLMSKIEKPRAIEYASEIIQLSDAVMVAR----GDLGVE-M  250 (480)
Q Consensus       176 ~~di~~a~~~~~vD~ialSfVr~~~di~~~r~~l~~~~~~IiaKIE~~~al~nl~eI~~~sDgimiaR----GDLg~e-~  250 (480)
T Consensus        70 ~~~~~~~~~~-~v~~v~~~~g~p~~~v~~l~~----~g~~v~~~v~s~~~A~~a~~--~GaD~iv~qG~eAGGH~g~~~~  142 (236)
T cd04730          70 EALLEVALEE-GVPVVSFSFGPPAEVVERLKA----AGIKVIPTVTSVEEARKAEA--AGADALVAQGAEAGGHRGTFDI  142 (236)
T ss_pred             HHHHHHHHHC-CCCEEEECCCCCHHHHHHHHH----CCCEEEEECCCHHHHHHHHH--CCCCEEEEECCCCCCCCCCCCC
T ss_conf             9999999976-999999879897899999998----29989995898999999998--1899899977777778898755


Q ss_pred             C-HHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEC
Q ss_conf             8-767368999999998513983998057678888288984034778999985199689981
Q gi|254780442|r  251 A-LELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVATAVFEEADAIMLS  311 (480)
Q Consensus       251 ~-~e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dvanav~dG~D~imLs  311 (480)
T Consensus       143 ~~~~lv~~v~~~-------~~ipviaAGGI~~g------------~~i~aal~lGA~gV~~G  185 (236)
T cd04730         143 GTFALVPEVRDA-------VDIPVIAAGGIADG------------RGIAAALALGADGVQMG  185 (236)
T ss_pred             CHHHHHHHHHHH-------HCCCEEEECCCCCH------------HHHHHHHHHCCCEEEEC
T ss_conf             567799999998-------29868965462778------------99999998089799955