HHsearch alignment for GI: 254780442 and conserved domain: pfam02896

>pfam02896 PEP-utilizers_C PEP-utilising enzyme, TIM barrel domain.
Probab=96.98  E-value=0.012  Score=39.33  Aligned_cols=148  Identities=21%  Similarity=0.265  Sum_probs=100.2

Q ss_pred             CCCCCCHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHC------------CCCEEEEEECCHHHHHHHHHHHH
Q ss_conf             555676556778998873488532505855773479999986200------------34335553278566311788875
Q gi|254780442|r  167 TTQALTQKDREDLHAALQTCEVDWVALSFIQSADDLLEIRKIISQ------------NKIGLMSKIEKPRAIEYASEIIQ  234 (480)
Q Consensus       167 ~l~~ltekD~~di~~a~~~~~vD~ialSfVr~~~di~~~r~~l~~------------~~~~IiaKIE~~~al~nl~eI~~  234 (480)
T Consensus       116 ~~p~lf~~QlrAilrAa~~g~l~-Im~PmVt~~~E~~~~r~~~~~~~~~l~~~~~~~~~~~iG~MiEvPsaa~~~d~l~~  194 (292)
T pfam02896       116 DYPEIFRTQLRAILRASAFGNLE-IMFPMVATVEELREAKRIIEEVKAELDKELGVDPDIKVGIMIEIPSAALLADQLAK  194 (292)
T ss_pred             CCHHHHHHHHHHHHHHHHCCCCE-EEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHH
T ss_conf             17076999999999987208807-98358799899999999999999999861797878418999824699995999986


Q ss_pred             HHHEEEEECCCCC-----HHCC-----------HHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf             3312475222200-----2158-----------76736899999999851398399805767888828898403477899
Q gi|254780442|r  235 LSDAVMVARGDLG-----VEMA-----------LELIPGIQKKLIRIARQLGKPVVIATQMLESMVTSPFPTRAEVSDVA  298 (480)
Q Consensus       235 ~sDgimiaRGDLg-----~e~~-----------~e~vp~~Qk~ii~~~~~~~kpvivATq~leSM~~~p~PTRaEv~Dva  298 (480)
T Consensus       195 ~~DF~SIGTNDLtQy~la~DR~n~~v~~l~d~~~Pavlr~i~~vi~~a~~~g~~vsiCGE~a~----dp-----~--~~~  263 (292)
T pfam02896       195 EVDFFSIGTNDLTQYTLAVDRDNERVAYLYDPLHPAVLRLIKQVIRAAHRKGKWVGICGEMAG----DP-----S--AVP  263 (292)
T ss_pred             HCCEEEECCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCC----CH-----H--HHH
T ss_conf             368779644388889887435773335436999769999999999999987999998088767----98-----9--999


Q ss_pred             HHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             9985199689981444354465899999999887630
Q gi|254780442|r  299 TAVFEEADAIMLSAETASGSYPVDAVRTMSLVASSAE  335 (480)
Q Consensus       299 nav~dG~D~imLs~ETa~G~yP~~~v~~~~~i~~~~E  335 (480)
T Consensus       264 ~L~~lGi~~lSv~--------p-~~i~~vk~~ir~~~  291 (292)
T pfam02896       264 LLLGLGLDEFSMS--------P-TSVPRARALAAQIA  291 (292)
T ss_pred             HHHHCCCCEEEEC--------H-HHHHHHHHHHHHHC
T ss_conf             9998799979988--------7-77999999999863