HHsearch alignment for GI: 254780442 and conserved domain: pfam03102
>pfam03102 NeuB NeuB family. NeuB is the prokaryotic N-acetylneuraminic acid (Neu5Ac) synthase. It catalyses the direct formation of Neu5Ac (the most common sialic acid) by condensation of phosphoenolpyruvate (PEP) and N-acetylmannosamine (ManNAc). This reaction has only been observed in prokaryotes; eukaryotes synthesize the 9-phosphate form, Neu5Ac-9-P, and utilize ManNAc-6-P instead of ManNAc. Such eukaryotic enzymes are not present in this family. This family also contains SpsE spore coat polysaccharide biosynthesis proteins.
Probab=91.14 E-value=1.3 Score=24.19 Aligned_cols=100 Identities=21% Similarity=0.365 Sum_probs=65.3
Q ss_pred CCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHEEEEECCCCCHHCCHHHHHHHHHHHHHHHHHCCCEEEEEH
Q ss_conf 73479999986200343355532785663117888753312475222200215876736899999999851398399805
Q gi|254780442|r 198 SADDLLEIRKIISQNKIGLMSKIEKPRAIEYASEIIQLSDAVMVARGDLGVEMALELIPGIQKKLIRIARQLGKPVVIAT 277 (480)
Q Consensus 198 ~~~di~~~r~~l~~~~~~IiaKIE~~~al~nl~eI~~~sDgimiaRGDLg~e~~~e~vp~~Qk~ii~~~~~~~kpvivAT 277 (480)
T Consensus 54 s~~~~~~l~~~~kk~gi~f~~t~fd~~s~~~l~~l--~~~~~KIaS~d~------~n~~-----Li~~i~k~~kpiiiST 120 (240)
T pfam03102 54 PEEWHKELFEYCKEKGIEFFSTPFDLESVDFLESL--GVPAYKIASGEI------TNLP-----LLRYIAKTGKPVILST 120 (240)
T ss_pred CHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHC--CCCEEEECCCCC------CCHH-----HHHHHHHCCCCEEEEC
T ss_conf 99999999999998299689898989999988755--888699898864------6589-----9999997399689957
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHC-CC-C-EEEECCCCCCCCCHHHH
Q ss_conf 76788882889840347789999851-99-6-89981444354465899
Q gi|254780442|r 278 QMLESMVTSPFPTRAEVSDVATAVFE-EA-D-AIMLSAETASGSYPVDA 323 (480)
Q Consensus 278 q~leSM~~~p~PTRaEv~Dvanav~d-G~-D-~imLs~ETa~G~yP~~~ 323 (480)
T Consensus 121 G~s---------~~~eI~~~i~~~~~~~~~~i~llhC----vS~YPt~~ 156 (240)
T pfam03102 121 GMA---------TLEEIEEAVETLREAGNEDITLLHC----TSEYPAPF 156 (240)
T ss_pred CCC---------CHHHHHHHHHHHHHCCCCCCEEEEE----CCCCCCCH
T ss_conf 988---------8999999999999634567768665----88899974