HHsearch alignment for GI: 254780444 and conserved domain: COG1476

>COG1476 Predicted transcriptional regulators [Transcription].
Probab=98.32  E-value=1.3e-06  Score=62.85  Aligned_cols=59  Identities=22%  Similarity=0.288  Sum_probs=52.8

Q ss_pred             HHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             9999999649998899998289987988997515788755779899999873218752100001
Q gi|254780444|r   12 AIDRMAERHNLTPSGLARKAGLDPTSFNKSKRFGIEGRNRWPSTESIFKILAATNETICQLLDL   75 (223)
Q Consensus        12 ~i~~l~~~~gls~~~lA~~~Gv~~~ti~~~~~~~~~g~~r~p~~~~l~kia~~~~v~~~~l~~~   75 (223)
T Consensus         5 k~k~~R~~~~ltQ~elA~~vgVsRQTi~~iEkgky~-----Psl~La~kia~~f~~~iedIF~~   63 (68)
T COG1476           5 KLKELRAELGLTQEELAKLVGVSRQTIIAIEKGKYN-----PSLELALKIARVFGKTIEDIFQL   63 (68)
T ss_pred             HHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCCCC-----CHHHHHHHHHHHHCCCHHHHHHH
T ss_conf             999999982858999999919579999999917988-----30999999999939979999865