HHsearch alignment for GI: 254780444 and conserved domain: COG1476
>COG1476 Predicted transcriptional regulators [Transcription].
Probab=98.32 E-value=1.3e-06 Score=62.85 Aligned_cols=59 Identities=22% Similarity=0.288 Sum_probs=52.8
Q ss_pred HHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 9999999649998899998289987988997515788755779899999873218752100001
Q gi|254780444|r 12 AIDRMAERHNLTPSGLARKAGLDPTSFNKSKRFGIEGRNRWPSTESIFKILAATNETICQLLDL 75 (223)
Q Consensus 12 ~i~~l~~~~gls~~~lA~~~Gv~~~ti~~~~~~~~~g~~r~p~~~~l~kia~~~~v~~~~l~~~ 75 (223)
T Consensus 5 k~k~~R~~~~ltQ~elA~~vgVsRQTi~~iEkgky~-----Psl~La~kia~~f~~~iedIF~~ 63 (68)
T COG1476 5 KLKELRAELGLTQEELAKLVGVSRQTIIAIEKGKYN-----PSLELALKIARVFGKTIEDIFQL 63 (68)
T ss_pred HHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCCCC-----CHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 999999982858999999919579999999917988-----30999999999939979999865