HHsearch alignment for GI: 254780444 and conserved domain: COG2932

>COG2932 Predicted transcriptional regulator [Transcription].
Probab=99.96  E-value=3.8e-28  Score=202.35  Aligned_cols=209  Identities=34%  Similarity=0.510  Sum_probs=162.4

Q ss_pred             CCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf             75589999999999996499988999982899879889975157887557798999998732187521000011112444
Q gi|254780444|r    3 SFSHKKIWEAIDRMAERHNLTPSGLARKAGLDPTSFNKSKRFGIEGRNRWPSTESIFKILAATNETICQLLDLPFSDGRT   82 (223)
Q Consensus         3 ~~~~~~i~~~i~~l~~~~gls~~~lA~~~Gv~~~ti~~~~~~~~~g~~r~p~~~~l~kia~~~~v~~~~l~~~~~~~~~~   82 (223)
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~   76 (214)
T COG2932           1 MLSHDSGGRAIDALAERGKASSSGLARKEGLDPTSFNLSKRASADVSARWLSTGSGEKVLEAAGAPTDLTAGDAS----E   76 (214)
T ss_pred             CCCHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCC----C
T ss_conf             940230443567777540332234667635687851044430044401022341132355222453221344344----6


Q ss_pred             CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECC
Q ss_conf             54422122024310113452221112544464035643721135454200368559999628332421487868999368
Q gi|254780444|r   83 TEKKEKEIPLLYFPPSGSGGFFDSGVFPTGNKWNTVGVPEIRSPHNGIYAIQTQDTRHKTQDTSMLPLYRKGDILILNSA  162 (223)
Q Consensus        83 ~~~~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~V~GDSM~P~i~~Gd~vlVd~~  162 (223)
T Consensus        77 ~~-~~~~~~~~~~a~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~------~~~-~~i~V~GDSMeP~~~~Gd~ilVd~~  148 (214)
T COG2932          77 NP-VVPLIPVSGAAGAGADGFFDENGFPVGFGWDEIERPPGIDPD------SGV-FALRVTGDSMEPTYEDGDTLLVDPG  148 (214)
T ss_pred             CC-CCCCEEEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC------CCE-EEEEEECCCCCCCCCCCCEEEEECC
T ss_conf             75-545345331035677753267761421144410056555776------663-8999967766630159999999789


Q ss_pred             CCCCCCCEEEEEEECCCEEEEEEEEECCCEEEEEECCCCC-CCEEECHHH-EEEEEEEEEEEC
Q ss_conf             9740588899997179689999999779879999685898-875854786-599977998529
Q gi|254780444|r  163 IQVNCGDRLLIKPRTGDIVAKVLISRRGRSIDLMSLNCCY-PVDTVEMSD-IEWIARILWASQ  223 (223)
Q Consensus       163 ~~~~~g~~v~~~~~~~~~~iKrl~~~~~~~~~l~s~Np~y-~~~~i~~~~-i~iigrVvw~~~  223 (223)
T Consensus       149 ~~~~~gd~v~v~~~g~~~~VK~l~~~~~~~~~l~S~N~~~~~~~~~~~~~~v~iIgrVv~~~~  211 (214)
T COG2932         149 VNTRRGDRVYVETDGGELYVKKLQREPGGLLRLVSLNPDYYPDEIFSEDDDVEIIGRVVWVSR  211 (214)
T ss_pred             CCEEECCEEEEEEECCEEEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEEE
T ss_conf             842519999999959948899999957987999968988887333574240799999988667