HHsearch alignment for GI: 254780444 and conserved domain: COG3423

>COG3423 Nlp Predicted transcriptional regulator [Transcription].
Probab=96.06  E-value=0.015  Score=36.53  Aligned_cols=54  Identities=22%  Similarity=0.365  Sum_probs=43.1

Q ss_pred             HHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
Q ss_conf             99999996499988999982899879889975157887557798999998732187521000
Q gi|254780444|r   12 AIDRMAERHNLTPSGLARKAGLDPTSFNKSKRFGIEGRNRWPSTESIFKILAATNETICQLL   73 (223)
Q Consensus        12 ~i~~l~~~~gls~~~lA~~~Gv~~~ti~~~~~~~~~g~~r~p~~~~l~kia~~~~v~~~~l~   73 (223)
T Consensus        12 dI~A~Lkk~G~Sl~~LS~~agls~~tL~n~L~------rp~pkgEri--IA~algv~P~eIW   65 (82)
T COG3423          12 DIIAALKKKGTSLAALSREAGLSSSTLANALD------RPWPKGERI--IADALGVPPEEIW   65 (82)
T ss_pred             HHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHC------CCCCHHHHH--HHHHHCCCHHHHC
T ss_conf             99999998564299999880878789999874------788718899--9999589888818