HHsearch alignment for GI: 254780444 and conserved domain: COG3636
>COG3636 Predicted transcriptional regulator [Transcription].
Probab=95.12 E-value=0.061 Score=32.65 Aligned_cols=56 Identities=29% Similarity=0.353 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCC
Q ss_conf 999999999964999889999828998798899751578875577989999987321875210
Q gi|254780444|r 9 IWEAIDRMAERHNLTPSGLARKAGLDPTSFNKSKRFGIEGRNRWPSTESIFKILAATNETICQ 71 (223)
Q Consensus 9 i~~~i~~l~~~~gls~~~lA~~~Gv~~~ti~~~~~~~~~g~~r~p~~~~l~kia~~~~v~~~~ 71 (223)
T Consensus 39 i~~alg~var~~G--MsqvA~~aGlsRe~LYkaLS~~GN-----Ptf~Til~V~kAlG~rl~~ 94 (100)
T COG3636 39 IAAALGVVARSRG--MSQVARKAGLSREGLYKALSPGGN-----PTFDTILAVLKALGLRLSA 94 (100)
T ss_pred HHHHHHHHHHHCC--HHHHHHHHCCCHHHHHHHHCCCCC-----CCHHHHHHHHHHCCCEEEC
T ss_conf 9999999998657--899999949669999998478999-----7589999999980865421