HHsearch alignment for GI: 254780444 and conserved domain: PHA00542
>PHA00542 putative Cro-like protein.
Probab=95.42 E-value=0.043 Score=33.61 Aligned_cols=44 Identities=14% Similarity=0.247 Sum_probs=32.1
Q ss_pred HHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf 9999996499988999982899879889975157887557798999998
Q gi|254780444|r 13 IDRMAERHNLTPSGLARKAGLDPTSFNKSKRFGIEGRNRWPSTESIFKI 61 (223)
Q Consensus 13 i~~l~~~~gls~~~lA~~~Gv~~~ti~~~~~~~~~g~~r~p~~~~l~ki 61 (223)
T Consensus 24 V~aLi-~~G~tQ~qI~~~tgv~QpsisRil----sGk~kDpR~s~v~~L 67 (82)
T PHA00542 24 VCALI-RAGWSQEQIADATDVSQPTICRIY----SGRHKDPRYSVVEKL 67 (82)
T ss_pred HHHHH-HCCCCHHHHHHHHCCCCHHHHHHH----CCCCCCCCCHHHHHH
T ss_conf 99999-822569999986087703689998----088789720699999