HHsearch alignment for GI: 254780444 and conserved domain: PRK10014
>PRK10014 DNA-binding transcriptional repressor MalI; Provisional.
Probab=92.97 E-value=0.18 Score=29.55 Aligned_cols=52 Identities=10% Similarity=-0.022 Sum_probs=35.7
Q ss_pred HHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCC
Q ss_conf 964999889999828998798899751578875577989999987321875210
Q gi|254780444|r 18 ERHNLTPSGLARKAGLDPTSFNKSKRFGIEGRNRWPSTESIFKILAATNETICQ 71 (223)
Q Consensus 18 ~~~gls~~~lA~~~Gv~~~ti~~~~~~~~~g~~r~p~~~~l~kia~~~~v~~~~ 71 (223)
T Consensus 3 ~~kkvTi~dIA~~aGVS~aTVSrvLn~~~~--Vs~eTr~rV~~aa~elgY~pn~ 54 (342)
T PRK10014 3 TAKKITIHDVALAAGVSVSTVSLVLSGKGR--ISTATGERVNQAIEELGFVRNR 54 (342)
T ss_pred CCCCCCHHHHHHHHCCCHHHHHHHHCCCCC--CCHHHHHHHHHHHHHHCCCCCH
T ss_conf 999887999999989699999999779899--9999999999999994899786