HHsearch alignment for GI: 254780444 and conserved domain: pfam01726
>pfam01726 LexA_DNA_bind LexA DNA binding domain. This is the DNA binding domain of the LexA SOS regulon repressor which prevents expression of DNA repair proteins. The aligned region contains a variant form of the helix-turn-helix DNA binding motif. This domain is found associated with pfam00717 the auto-proteolytic domain of LexA EC:3.4.21.88.
Probab=95.61 E-value=0.026 Score=35.06 Aligned_cols=41 Identities=22% Similarity=0.457 Sum_probs=34.9
Q ss_pred CCCCC--HHHHHHHHHHHHHHCCCCHH--HHHHHHCC-CHHHHHHH
Q ss_conf 97755--89999999999996499988--99998289-98798899
Q gi|254780444|r 1 MTSFS--HKKIWEAIDRMAERHNLTPS--GLARKAGL-DPTSFNKS 41 (223)
Q Consensus 1 ~~~~~--~~~i~~~i~~l~~~~gls~~--~lA~~~Gv-~~~ti~~~ 41 (223)
T Consensus 1 M~~LT~rQ~~il~~I~~~~~~~G~~Pt~rEI~~~~g~~S~s~v~~~ 46 (65)
T pfam01726 1 MKPLTERQREVLDFIKASIEETGYPPSRREIAQALGLRSPNAAEEH 46 (65)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHH
T ss_conf 9633799999999999999982889879999999389980999999