HHsearch alignment for GI: 254780444 and conserved domain: pfam08667

>pfam08667 BetR BetR domain. This family includes an N-terminal helix-turn-helix domain.

Probab=94.71  E-value=0.14  Score=30.24  Aligned_cols=66  Identities=14%  Similarity=0.076  Sum_probs=52.4

Q ss_pred             HHHHHHHHHHHHCCCCH----HHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             99999999999649998----899998289987988997515788755779899999873218752100001111
Q gi|254780444|r    8 KIWEAIDRMAERHNLTP----SGLARKAGLDPTSFNKSKRFGIEGRNRWPSTESIFKILAATNETICQLLDLPFS   78 (223)
Q Consensus         8 ~i~~~i~~l~~~~gls~----~~lA~~~Gv~~~ti~~~~~~~~~g~~r~p~~~~l~kia~~~~v~~~~l~~~~~~   78 (223)
T Consensus         5 ~ia~rvr~lL~r~GI~kRqh~s~is~iL~LSfS~a~RKLkG~sp-----W~l~Ql~kVA~~fg~~~a~L~~~~~~   74 (146)
T pfam08667         5 IVAERVRKLLTRTGIAERQHNTTIANILGLSFSQAYRKLKGSIP-----WNLAQLQKVAQYFGVPAAILLIYYED   74 (146)
T ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCC-----CCHHHHHHHHHHHCCCHHHHHCCCHH
T ss_conf             99999999998639975677889999978748988787358997-----44999999999959799999275022