HHsearch results for GI: 254780444 and protein with PDBid: 1neq_A
>1neq_A DNA-binding protein NER; NMR {Enterobacteria phage MU} SCOP: a.35.1.2 PDB: 1ner_A
Probab=96.12 E-value=0.0075 Score=37.10 Aligned_cols=54 Identities=24% Similarity=0.388 Sum_probs=41.7
Q ss_pred HHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
Q ss_conf 99999996499988999982899879889975157887557798999998732187521000
Q gi|254780444|r 12 AIDRMAERHNLTPSGLARKAGLDPTSFNKSKRFGIEGRNRWPSTESIFKILAATNETICQLL 73 (223)
Q Consensus 12 ~i~~l~~~~gls~~~lA~~~Gv~~~ti~~~~~~~~~g~~r~p~~~~l~kia~~~~v~~~~l~ 73 (223)
.|.+.++++|+|-++||+..|++++|+.+-. ...+|+.|.+ ||+++|+.+.++-
T Consensus 13 dI~AaL~krG~sLa~lsr~~Gls~~tl~nal------~rp~pkgEri--IA~aLGv~P~eIW 66 (74)
T 1neq_A 13 DVIAGLKKRKLSLSALSRQFGYAPTTLANAL------ERHWPKGEQI--IANALETKPEVIW 66 (74)
T ss_dssp HHHHHHHTTSCCHHHHHHHHSSCHHHHHHTT------TSSCHHHHHH--HHHHTTSCHHHHC
T ss_pred HHHHHHHHCCCCHHHHHHHHCCCHHHHHHHH------CCCCCHHHHH--HHHHHCCCHHHHC
T ss_conf 9999999968969999999099889999988------2778079999--9999785988949