HHsearch results for GI: 254780444 and protein with PDBid: 3bd1_A
>3bd1_A CRO protein; transcription factor, helix-turn-helix, prophage, structural evolution; 1.40A {Xylella fastidiosa ann-1}
Probab=97.18 E-value=0.0005 Score=44.74 Aligned_cols=58 Identities=22% Similarity=0.193 Sum_probs=43.9
Q ss_pred HHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCC--CCCCCCCCC
Q ss_conf 99999999649998899998289987988997515788755779899999873218--752100001
Q gi|254780444|r 11 EAIDRMAERHNLTPSGLARKAGLDPTSFNKSKRFGIEGRNRWPSTESIFKILAATN--ETICQLLDL 75 (223)
Q Consensus 11 ~~i~~l~~~~gls~~~lA~~~Gv~~~ti~~~~~~~~~g~~r~p~~~~l~kia~~~~--v~~~~l~~~ 75 (223)
.+|++..+..| +|++||+++||++++|++|+.+.. ...+...+|.++.+ ++..+|...
T Consensus 2 ~~i~~AI~~~G-~q~~lAr~lGVsq~aVs~W~~~~~------vP~~~~~~Ie~aT~g~Vt~~eLrPD 61 (79)
T 3bd1_A 2 NAIDIAINKLG-SVSALAASLGVRQSAISNWRARGR------VPAERCIDIERVTNGAVICRELRPD 61 (79)
T ss_dssp CHHHHHHHHHS-SHHHHHHHHTCCHHHHHHHHHHTC------CCGGGHHHHHHHTTTSSCHHHHCTT
T ss_pred CHHHHHHHHHC-CHHHHHHHHCCCHHHHHHHHHCCC------CCHHHHHHHHHHHCCCCCHHHHCCC
T ss_conf 58999999968-999999992999999999984699------9999999999997895319984955