HHsearch results for GI: 254780444 and protein with PDBid: 3dpj_A

>3dpj_A Transcription regulator, TETR family; APC88616, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MES; 1.90A {Silicibacter pomeroyi}

Probab=93.04  E-value=0.17  Score=28.33  Aligned_cols=41  Identities=15%  Similarity=0.182  Sum_probs=32.6

Q ss_pred             CCCCHHHHHHHHHHHHHHCC---CCHHHHHHHHCCCHHHHHHHH
Q ss_conf             77558999999999999649---998899998289987988997
Q gi|254780444|r    2 TSFSHKKIWEAIDRMAERHN---LTPSGLARKAGLDPTSFNKSK   42 (223)
Q Consensus         2 ~~~~~~~i~~~i~~l~~~~g---ls~~~lA~~~Gv~~~ti~~~~   42 (223)
                      +.-|+++|.++-.++..++|   +|-.++|+++|++++++.++.
T Consensus         6 ~a~tR~~Il~aa~~l~~~~G~~~~s~~~IA~~agvs~~~~Y~~F   49 (194)
T 3dpj_A            6 QAQTRDQIVAAADELFYRQGFAQTSFVDISAAVGISRGNFYYHF   49 (194)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCTTTCCHHHHHHHHTCCHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHC
T ss_conf             99999999999999999749251889999998682912688875