HHSEARCH alignment of GI: 254780444 and SCOP domain: d1lmb3_

Alignment

Probab=98.78  E-value=1.1e-08  Score=73.43  Aligned_cols=64  Identities=6%  Similarity=0.019  Sum_probs=56.4

Q ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             999999999999649998899998289987988997515788755779899999873218752100001
Q gi|254780444|r    7 KKIWEAIDRMAERHNLTPSGLARKAGLDPTSFNKSKRFGIEGRNRWPSTESIFKILAATNETICQLLDL   75 (223)
Q Consensus         7 ~~i~~~i~~l~~~~gls~~~lA~~~Gv~~~ti~~~~~~~~~g~~r~p~~~~l~kia~~~~v~~~~l~~~   75 (223)
                      +++.+.|+++|+++||||.+||+++|++++++++|++|...     |+.+.+.++|+++++++.++...
T Consensus        11 ~~l~~~i~~~R~~~gltq~~lA~~lgis~~~is~~E~g~~~-----~s~~~l~~ia~~l~v~~~~~~~~   74 (87)
T d1lmb3_          11 RRLKAIYEKKKNELGLSQESVADKMGMGQSGVGALFNGINA-----LNAYNAALLAKILKVSVEEFSPS   74 (87)
T ss_dssp             HHHHHHHHHHHHHHTCCHHHHHHHHTSCHHHHHHHHTTSSC-----CCHHHHHHHHHHHTSCGGGTCHH
T ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCC-----CCHHHHHHHHHHHCCCHHHHCHH
T ss_conf             99999999999993999999998867228889999811478-----75999999999989799998746

SCOP domain information

class: All alpha proteins
fold: lambda repressor-like DNA-binding domains
superfamily: lambda repressor-like DNA-binding domains
family: Phage repressors
domain: lambda C1 repressor, DNA-binding domain
species: Bacteriophage lambda [TaxId: 10710]