HHSEARCH alignment of GI: 254780444 and SCOP domain: d1y7ya1

Alignment
>d1y7ya1 a.35.1.3 (A:5-73) Restriction-modification controller protein C.AhdI {Aeromonas hydrophila [TaxId: 644]}
Probab=98.89  E-value=3.1e-09  Score=76.93  Aligned_cols=60  Identities=22%  Similarity=0.170  Sum_probs=55.4

Q ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCC
Q ss_conf             99999999999649998899998289987988997515788755779899999873218752100
Q gi|254780444|r    8 KIWEAIDRMAERHNLTPSGLARKAGLDPTSFNKSKRFGIEGRNRWPSTESIFKILAATNETICQL   72 (223)
Q Consensus         8 ~i~~~i~~l~~~~gls~~~lA~~~Gv~~~ti~~~~~~~~~g~~r~p~~~~l~kia~~~~v~~~~l   72 (223)
                      +++.+|+++|+++||||.+||+++|++++++++|++|..     .|+.+.+.++|++++++++++
T Consensus         9 ~~g~~ik~~R~~~gltq~~lA~~~gis~~~i~~~E~g~~-----~p~~~~l~~ia~~l~v~~~~l   68 (69)
T d1y7ya1           9 KFGQRLRELRTAKGLSQETLAFLSGLDRSYVGGVERGQR-----NVSLVNILKLATALDIEPREL   68 (69)
T ss_dssp             HHHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHTTCS-----CCBHHHHHHHHHHTTSCGGGG
T ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCC-----CCCHHHHHHHHHHHCCCHHHH
T ss_conf             999999999998399999998682998989999987999-----999999999999969599997


SCOP domain information

class: All alpha proteins
fold: lambda repressor-like DNA-binding domains
superfamily: lambda repressor-like DNA-binding domains
family: SinR domain-like
domain: Restriction-modification controller protein C.AhdI
species: Aeromonas hydrophila [TaxId: 644]