HHSEARCH alignment of GI: 254780444 and SCOP domain: d1z0xa1

Alignment

Probab=90.56  E-value=0.16  Score=26.88  Aligned_cols=40  Identities=15%  Similarity=0.198  Sum_probs=31.4

Q ss_pred             CCCHHHHHHH-HHHHHHHC---CCCHHHHHHHHCCCHHHHHHHH
Q ss_conf             7558999999-99999964---9998899998289987988997
Q gi|254780444|r    3 SFSHKKIWEA-IDRMAERH---NLTPSGLARKAGLDPTSFNKSK   42 (223)
Q Consensus         3 ~~~~~~i~~~-i~~l~~~~---gls~~~lA~~~Gv~~~ti~~~~   42 (223)
                      .+|+++|.++ ++-+.++.   ++|-.++|+++|++++++.++.
T Consensus         1 k~tr~~Ii~aa~~l~~e~~G~~~~t~~~Ia~~agvs~~~iy~hF   44 (68)
T d1z0xa1           1 KLSKDTIIAAAFSLLEKSPTLEQLSMRKVAKQLGVQAPAIYWYF   44 (68)
T ss_dssp             CCSHHHHHHHHHHHHHHSCCGGGCCHHHHHHHHTSCHHHHHTTC
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHC
T ss_conf             95899999999999987679231679999998772656899962

SCOP domain information

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Tetracyclin repressor-like, N-terminal domain
domain: Transcriptional regulator EF0787
species: Enterococcus faecalis [TaxId: 1351]