HHSEARCH alignment of GI: 254780444 and SCOP domain: d2b5aa1

Alignment
>d2b5aa1 a.35.1.3 (A:1-77) Regulatory protein C.BclI {Bacillus caldolyticus [TaxId: 1394]}
Probab=98.91  E-value=1.4e-09  Score=79.12  Aligned_cols=67  Identities=21%  Similarity=0.177  Sum_probs=59.6

Q ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             899999999999964999889999828998798899751578875577989999987321875210000111
Q gi|254780444|r    6 HKKIWEAIDRMAERHNLTPSGLARKAGLDPTSFNKSKRFGIEGRNRWPSTESIFKILAATNETICQLLDLPF   77 (223)
Q Consensus         6 ~~~i~~~i~~l~~~~gls~~~lA~~~Gv~~~ti~~~~~~~~~g~~r~p~~~~l~kia~~~~v~~~~l~~~~~   77 (223)
                      ++.++++|+++|+++|+||.+||+++|++++++++|++|..     .|+.+.|.++|.++++++++|....+
T Consensus         8 ~~~~g~~ik~~R~~~gltq~~lA~~~gis~~~i~~~e~g~~-----~p~~~~l~~ia~~l~v~~~~l~~~~~   74 (77)
T d2b5aa1           8 KRKFGRTLKKIRTQKGVSQEELADLAGLHRTYISEVERGDR-----NISLINIHKICAALDIPASTFFRKME   74 (77)
T ss_dssp             HHHHHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHTTCS-----CCBHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCC-----CCCHHHHHHHHHHHCCCHHHHHCCCC
T ss_conf             99999999999998099999999897979999999986998-----99999999999996989999854235


SCOP domain information

class: All alpha proteins
fold: lambda repressor-like DNA-binding domains
superfamily: lambda repressor-like DNA-binding domains
family: SinR domain-like
domain: Regulatory protein C.BclI
species: Bacillus caldolyticus [TaxId: 1394]