HHSEARCH alignment of GI: 254780444 and SCOP domain: d2id3a1

Alignment

Probab=91.05  E-value=0.35  Score=24.76  Aligned_cols=39  Identities=15%  Similarity=0.170  Sum_probs=33.0

Q ss_pred             CCHHHHHHHHHHHHHHCCC---CHHHHHHHHCCCHHHHHHHH
Q ss_conf             5589999999999996499---98899998289987988997
Q gi|254780444|r    4 FSHKKIWEAIDRMAERHNL---TPSGLARKAGLDPTSFNKSK   42 (223)
Q Consensus         4 ~~~~~i~~~i~~l~~~~gl---s~~~lA~~~Gv~~~ti~~~~   42 (223)
                      .++++|.++.-++..+.|+   |-.++|+.+|++++++.++.
T Consensus         6 ~~r~~Il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~~iY~~F   47 (68)
T d2id3a1           6 RIREAVLLAAGDALAADGFDALDLGEIARRAGVGKTTVYRRW   47 (68)
T ss_dssp             HHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHTCCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHC
T ss_conf             999999999999999849340779999999786887999998

SCOP domain information

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Tetracyclin repressor-like, N-terminal domain
domain: Putative transcriptional regulator SCO5951
species: Streptomyces coelicolor [TaxId: 1902]