HHSEARCH alignment of GI: 254780444 and SCOP domain: d2ppxa1

Alignment

Probab=98.07  E-value=3.5e-06  Score=57.17  Aligned_cols=54  Identities=11%  Similarity=0.028  Sum_probs=40.6

Q ss_pred             HHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCC
Q ss_conf             999999964999889999828998798899751578875577989999987321875210
Q gi|254780444|r   12 AIDRMAERHNLTPSGLARKAGLDPTSFNKSKRFGIEGRNRWPSTESIFKILAATNETICQ   71 (223)
Q Consensus        12 ~i~~l~~~~gls~~~lA~~~Gv~~~ti~~~~~~~~~g~~r~p~~~~l~kia~~~~v~~~~   71 (223)
                      .|+++|++.||||.+||+++|++++|+++|++|...     |+...+. ++..+...++.
T Consensus         3 ~ik~~R~~~gltQ~elA~~lGvs~~tvs~~E~G~~~-----P~~~~~~-ll~~l~~~Pe~   56 (62)
T d2ppxa1           3 RIKIIRRALKLTQEEFSARYHIPLGTLRDWEQGRSE-----PDQPARA-YLKIIAVDPEG   56 (62)
T ss_dssp             HHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHTTSSC-----CCHHHHH-HHHHHHHCHHH
T ss_pred             HHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCC-----CCHHHHH-HHHHHHCCHHH
T ss_conf             889999996999999999969899999988779889-----9999999-99998669999

SCOP domain information

class: All alpha proteins
fold: lambda repressor-like DNA-binding domains
superfamily: lambda repressor-like DNA-binding domains
family: SinR domain-like
domain: Uncharacterized protein Atu1735
species: Agrobacterium tumefaciens [TaxId: 358]