HHSEARCH alignment of GI: 254780444 and SCOP domain: d3c07a1

Alignment

Probab=91.48  E-value=0.32  Score=25.04  Aligned_cols=39  Identities=18%  Similarity=0.135  Sum_probs=32.1

Q ss_pred             CCHHHHHHHHHHHHHHCCC---CHHHHHHHHCCCHHHHHHHH
Q ss_conf             5589999999999996499---98899998289987988997
Q gi|254780444|r    4 FSHKKIWEAIDRMAERHNL---TPSGLARKAGLDPTSFNKSK   42 (223)
Q Consensus         4 ~~~~~i~~~i~~l~~~~gl---s~~~lA~~~Gv~~~ti~~~~   42 (223)
                      -|+++|..+--.+..+.|+   |-.++|+++|++++++.++.
T Consensus         5 ~tr~~Il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~~~y~~F   46 (75)
T d3c07a1           5 QTRALILETAMRLFQERGYDRTTMRAIAQEAGVSVGNAYYYF   46 (75)
T ss_dssp             HHHHHHHHHHHHHHHHTCSTTCCHHHHHHHHTSCHHHHHHHC
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHC
T ss_conf             999999999999999749140779999998793987999898

SCOP domain information

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: Homeodomain-like
family: Tetracyclin repressor-like, N-terminal domain
domain: Putative transcriptional regulator SCO4850
species: Streptomyces coelicolor [TaxId: 1902]