BLAST/PSIBLAST alignment of GI: 254780444 and GI: 15887830 at iteration 1
>gi|15887830|ref|NP_353511.1| bacteriophage repressor protein C1 [Agrobacterium tumefaciens str. C58] Length = 216
>gi|15155410|gb|AAK86296.1| bacteriophage repressor protein C1 [Agrobacterium tumefaciens str. C58] Length = 216
 Score =  203 bits (516), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 111/222 (50%), Positives = 147/222 (66%), Gaps = 9/222 (4%)

Query: 4   FSHKKIWEAIDRMAERHNLTPSGLARKAGLDPTSFNKSKRFGIEGRNRWPSTESIFKILA 63
            SH+ IW AID +AERH LTPS LA++AGLDPTSFNKSKRFG +GR RWPSTES+ K+L 
Sbjct: 2   LSHETIWSAIDTLAERHQLTPSALAKRAGLDPTSFNKSKRFGPDGRKRWPSTESVSKVLE 61

Query: 64  ATNETICQLLDLPFSDGRTTEKK--EKEIPLLYFPPSGSGGFFDSGVFPTGNKWNTVGVP 121
           AT  ++ Q     F   +T +    +  IPLL F  +GSGGFFD G FP G  W+ V  P
Sbjct: 62  ATGASVDQFFGYAFGRAQTMQPSGADNAIPLLGFAQAGSGGFFDDGGFPAGQGWDVVEFP 121

Query: 122 EIRSPHNGIYAIQTQDTRHKTQDTSMLPLYRKGDILILNSAIQVNCGDRLLIKPRTGDIV 181
                  G+YA++        Q  SM+PLYR GDILI+     V  GDR+++K R G+++
Sbjct: 122 SSPERKQGVYALE-------VQGESMMPLYRDGDILIVEPGAPVRRGDRVVLKSRDGEVM 174

Query: 182 AKVLISRRGRSIDLMSLNCCYPVDTVEMSDIEWIARILWASQ 223
           AKVL  +  ++I+L+SLN  +P  + +M+D+EWIARI+WASQ
Sbjct: 175 AKVLARQSPKNIELLSLNPEHPNRSFDMADVEWIARIIWASQ 216