HHsearch alignment for GI: 254780445 and conserved domain: COG0495

>COG0495 LeuS Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis].
Probab=100.00  E-value=0  Score=1027.96  Aligned_cols=682  Identities=24%  Similarity=0.332  Sum_probs=502.0

Q ss_pred             CCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             88996897799999998647614454056888848996282255889762157785668789987670898267888824
Q gi|254780445|r   22 MRAKLPQKESELITYWQKIRLFDKIRESAVGRKNFTLHDGPPYANGHIHIGHALNKILKDVIVRSFQMRNFNACFVPGWD  101 (963)
Q Consensus        22 ~r~~~~~~E~~~~~~W~~~~~f~~~~~~~~~~~~f~l~dgPPy~nG~lH~GH~~n~~~kDi~~Ry~rm~G~~Vl~~~GwD  101 (963)
T Consensus         3 ~~y~~~~IE~KWQ~~W~e~~~Fe~~~d~~~~-~Kfyvl~mfPYpSG~LHvGH~r~Yti~Dv~aRykRm~GyNVL~PMGwd   81 (814)
T COG0495           3 SRYNPREIEEKWQKRWEEAKVFEADEDSDKP-EKFYVLVMFPYPSGALHVGHVRNYTIGDVIARYKRMQGYNVLHPMGWD   81 (814)
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC-CCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEECCCCCCC
T ss_conf             6523578999999999865971068988877-755998678788887346854121089999999985697214567556


Q ss_pred             CCCCHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEECCCHHHHHHHHHHHHHHH
Q ss_conf             44208999999987655998334899999999999999999999999997060776369811577679899999999999
Q gi|254780445|r  102 CHGLPIEWKVENEYLAKGKKKDDIPVNEFRQACRDSASAWVKIQSKEFQRLGIVGDFENPYTTMTRESEAQIASELLKIA  181 (963)
Q Consensus       102 ~hGLPiE~~vek~l~~~~~~~~~~~~~~~~~~c~~~a~~~i~~~~~~~~rlG~~~Dw~~~y~T~dp~y~~~~~~~F~~l~  181 (963)
T Consensus        82 afGlPae~~A~~~----~~-----~P-------~~wt~~ni~~~k~qlk~lG~siDW~Ref~T~Dp~Yyk~~QW~F~kL~  145 (814)
T COG0495          82 AFGLPAENAAIKI----GT-----DP-------AKWTYYNIAYMKKQLKSLGFSIDWRREFATCDPEYYKWIQWQFLKLY  145 (814)
T ss_pred             CCCCHHHHHHHHH----CC-----CH-------HHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCHHHHHHHHHHHHH
T ss_conf             6686399999985----78-----96-------99999999999999998087612355456479647799999999999


Q ss_pred             HCCCEECCCCEEEECCCCCCCCCCHHHEEEE-------E-ECCEEEEEEEECCCCCCCCCCCCCHHCCHHHHHHHHHHHH
Q ss_conf             8796110343022057435736500210132-------1-0577999833037531122001100000057886544532
Q gi|254780445|r  182 ESDQIYRGIKPIMWSIAEQTTLAEAEIEYHD-------V-DSDSILVGFPVKSSADYLIKSQIVIWTTTPWTIPGNRAIA  253 (963)
Q Consensus       182 ~kGliyr~~~pV~w~p~~~T~La~~Evey~d-------~-~~~s~~v~F~l~~~~~~~~~~~~~iwTTrP~Tl~~n~ai~  253 (963)
T Consensus       146 ekGL~y~~~~~VnwcP~d~tvlaneqv~~g~~~r~~~~V~~kel~qw~~kit~yae~ll~~l~~l~~~wPE~Vk~mq~nW  225 (814)
T COG0495         146 EKGLAYRKEAPVNWCPVDGTVLANEQVIDGGCWRCGEPVEIKELTQWFFKITDYADELLDDLDKLATLWPETVKGMQRNW  225 (814)
T ss_pred             HCCCEEECCCCCEECCCCCCCCCCCEEECCCCCCCCCCEEEEEEEEEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHCC
T ss_conf             77988852554310777697615412415876557885268666899999134299998666654247956699898727


Q ss_pred             CCCCCCEEEEEECCCCC----CCCCCC------CCEEE-EC--CCHHHH------------HHHHCCCCEEEE-----EE
Q ss_conf             27767458998306653----111123------74355-12--111888------------887609851784-----10
Q gi|254780445|r  254 FSSNHQYGLYDVISCSG----QHTFDT------GKKLI-IS--KNLAQS------------IANQTNVKIALV-----CD  303 (963)
Q Consensus       254 v~p~~~Y~~~~~~~~~~----~~~~~~------~~~~i-~a--~~~~~~------------~~~~~~~~~~~~-----~~  303 (963)
T Consensus       226 Ig~s~g~~v~f~~~~~~~~~~~~vfttr~dt~~gvt~~~~a~~h~lv~~~~~~~~~~~~a~fv~~~~~~~~~~~~~~~~~  305 (814)
T COG0495         226 IGPSEGYEVAFVVDGEEEIVSIEVFTTRPDTLFGVTYVVLAPEHPLVGKLVTNPQTPLVAEFVDECKGTGVVESVPAHAE  305 (814)
T ss_pred             CCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCCEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf             07888758998517764410024466357311674899970786678987418651669999988617871563045687


Q ss_pred             CCCCCCCCCEEEECCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHCCCEEEEECCCCCCC
Q ss_conf             01111128575431378665125511443223322445405640578988989987605212210022034302344551
Q gi|254780445|r  304 VKAEDLSKTMCSHPLKKLGYTFSVPLIDAEYVANDCGTGFVHVAPSHGVEDFTAWNEAKDILLNRSVDIKVPSPVDGRGF  383 (963)
Q Consensus       304 ~~g~~l~g~~~~~Pl~~~~~~~~~pi~~~d~V~~~~GTG~Vh~aPahg~~Dy~~~~~~~~~~~~~~~~l~~~~~vd~~G~  383 (963)
T Consensus       306 k~gv-~~g~~a~~p~~~e----~iPi~~a~~vl~~ygtgavm~vpahd~rd~efA---------~~y~l~i~~vi~~~~~  371 (814)
T COG0495         306 KDGV-FLGGYAINPVNGE----KIPVWIANYVLMEYGTGAVMGVPAHDERDLEFA---------TKYKLPIKKVIMPEGT  371 (814)
T ss_pred             CCCE-ECCCCCCCCCCCC----CCCEEEECCCCCCCCCCCEECCCCCCCHHHHHH---------HHCCCCEEEEEECCCC
T ss_conf             7631-1365024777788----677899674314555663545888870206899---------8528861799824887


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCHHHH
Q ss_conf             02431001786321135544456754523566479821000000122113210132033331023663022455423689
Q gi|254780445|r  384 YTTEAPGFSGARVLDDAGEKGNANEVVIAALINACAILNRSIVKHSYPHSWRSKKPIIFRTTSQWFLHMDKKLGDGSTLR  463 (963)
Q Consensus       384 ~~~~~~~~~G~~v~~~~~~~~~a~~~ii~~L~e~g~l~~~~~~~H~yP~cwR~~~pii~r~~~QWFi~~d~~~~~~~~~k  463 (963)
T Consensus       372 --------~~~~~~~~-------~g~linS~~~~gl~~e-~a~----~~~-~~~--l~~~~~~q~~v~Y----------~  418 (814)
T COG0495         372 --------VGKKVYEG-------EGVLINSGGLDGLDYE-EAK----VKI-RCG--LVKRGLGQWFVNY----------R  418 (814)
T ss_pred             --------CCCEEECC-------CCEEECCCCCCCCCCH-HHH----HHH-HHH--HHHHCCCCEEEEC----------C
T ss_conf             --------66400114-------7457625433676405-679----999-986--8872378258851----------4


Q ss_pred             HHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCEEECC--CHHHHHHHHHHHCCC--CCCC
Q ss_conf             999875200000244434320244304320000112345672258982588473252--112444212221188--7433
Q gi|254780445|r  464 SRALSEVEKIRFFPSSGKNRLRSMIENRPDWLLSRQRNWGVPICFFYNEKGEILLDK--AINDRIIKTFKDQGS--DAWF  539 (963)
Q Consensus       464 ~~~l~~i~~v~~~P~~~k~r~~~~i~~~~DW~ISRqR~WG~PIPi~~~e~~~~~~~~--~~~~~i~~~~~~~g~--d~~~  539 (963)
T Consensus       419 ---------------------------lrdW~~srqRywg~pipii~~e~~~~~~~~~d~Lpv~lp~~~~~~gt~~pL~~  471 (814)
T COG0495         419 ---------------------------LRDWLKSRQRYWGEPIPIIHCEDCGVVPVPEDWLPVKLPERVRGLGTGSPLPW  471 (814)
T ss_pred             ---------------------------CCHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf             ---------------------------51577899997089964547423785547367667436641146798899988


Q ss_pred             CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-------------CCCCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             56401114688788755456642100003335454332-------------22223334431002554442111245544
Q gi|254780445|r  540 SEGSRDFFLGDRASEPWIQSKDILDVWFDSACTHTILL-------------GKDPKLAWPADVYLEGSDQHRGWFQHSLL  606 (963)
Q Consensus       540 ~~~~~~~~~~~~~~~~~~r~~DvlDvWfDSg~s~~~~~-------------~~~~~~~~PaD~~~eG~Dq~RgWF~s~ll  606 (963)
T Consensus       472 ~~~W---~~~s~~~s~~~ret~Tm~~~~~s--swy~~r~~d~~~~~~~~~~~e~~~yW~PVD~yigG~e-h----avlHL  541 (814)
T COG0495         472 DEEW---VIESLPDSTAYRETDTMDTFIDS--SWYYLRFFDPIFLGELPFDREEFNYWYPVDLYIGGIE-H----AVLHL  541 (814)
T ss_pred             CCCE---EEEECCCCCEEEEHHHHHHHCCC--CCCCHHHCCHHCCCCCHHCHHHHHCCCCHHEEECCHH-H----HHHHH
T ss_conf             8361---79966998535323246576043--2101866581007543225788742067201226366-7----77889


Q ss_pred             HHH-----HCCC------CCEEEEECCCCCEECCCCCCHHCCCCCCCCHHHHHCCCCHHHHHHHHH-HCCCCCCCCCCCH
Q ss_conf             433-----1178------400001303782621345300001234433366411367578878887-1787665544310
Q gi|254780445|r  607 ESC-----ATRG------STPFTSLITHGFSVDENGEKMSKSKGNVVFPEEIISESGADVLRYWAV-NSDYHDDQRLGKN  674 (963)
Q Consensus       607 ~~~-----~~~~------~~Pfk~v~~hG~vld~~G~KMSKS~GNvi~p~~ii~~yGaD~lR~~~~-~~~~~~d~~~~~~  674 (963)
T Consensus       542 ly~rF~hkal~d~g~~p~~epf~~L~~qGmVl~~~g~KMSKSKgN~v~p~~~i~~yGADt~Rl~~m~~ap~~~d~~W~e~  621 (814)
T COG0495         542 LYFRFFHKALFDEGLVPKDEPFKKLITQGMVLGEEGEKMSKSKGNVVDPEEAVEKYGADTVRLYIMFAAPPEQDLEWSES  621 (814)
T ss_pred             HHHHHHHHHHCCCCCCCCCCHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCHHHCCCCCHH
T ss_conf             99999998834757787765044441142687427770454457888989999995840989999860877537887745


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHCC
Q ss_conf             256777640000011000001224444567310111278887543689999998898765-4012266889987863024
Q gi|254780445|r  675 IIQTNIDTYRKLRNTIRWMLGMLAHDTGNEPSLADMPALEQLMLHRLTELDQVVREAYDA-FNFKEVVRQLTNFSNAELS  753 (963)
Q Consensus       675 ~l~~~~~~~~kl~Nt~rf~l~~l~~~~~~~~~~~~l~~~DkwiLskl~~~i~~v~~~~e~-~~f~~a~~~i~~F~~~dLS  753 (963)
T Consensus       622 gv~g~~rfL~r~~~l~~~~~~~~----~~~~~~~~~-~~~~~~~h~~---~~~v~~~~e~~~~~nt~i~~~m~l~N-~l-  691 (814)
T COG0495         622 GVEGARRFLQRVWNLVKEHLEKL----VEELTKEQG-KEDRWLLHRT---IKKVTEDFEARQTFNTAIAALMELLN-AL-  691 (814)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHCC----CCCCCCHHH-HHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHH-HH-
T ss_conf             64899999999999999864023----333553056-8899999999---99999999999889999999999999-99-


Q ss_pred             CCHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHCCH
Q ss_conf             0010102012227899808999999999999999999970004489999998638867734533588998356898
Q gi|254780445|r  754 SFYFDIRKDSLYCDSPSSLKRLSSIAVIRILCRHLIIWIAPILPFTAEEAWLSLNPEAVSVHLELFPIIPLEWQNA  829 (963)
Q Consensus       754 ~~Yld~~Kdrly~~~~~s~~R~s~~~~L~~il~~l~~lLaPi~P~~aEEiw~~l~~~~~SI~~~~wP~~~~~~~d~  829 (963)
T Consensus       692 ~~~~~~~~~----------~~----~~l~~~l~~~v~lLaP~aPH~aEElW~~lg~-~~~v~~~~wP~~de~~l~~  752 (814)
T COG0495         692 RKYLRRTEG----------DR----KVLREALETWVRLLAPFAPHIAEELWEELGN-EGFVSNAPWPEPDEEALVE  752 (814)
T ss_pred             HHHHHHCCC----------HH----HHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC-CCCEEECCCCCCCHHHCCC
T ss_conf             998750232----------07----8999999999999666664779999999669-9816417899877344165