HHsearch alignment for GI: 254780445 and conserved domain: COG0495
>COG0495 LeuS Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis].
Probab=96.39 E-value=0.0043 Score=39.52 Aligned_cols=111 Identities=19% Similarity=0.235 Sum_probs=72.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCC
Q ss_conf 45510243100178632113554445675452356647982100000012211321013203333102366302245542
Q gi|254780445|r 380 GRGFYTTEAPGFSGARVLDDAGEKGNANEVVIAALINACAILNRSIVKHSYPHSWRSKKPIIFRTTSQWFLHMDKKLGDG 459 (963)
Q Consensus 380 ~~G~~~~~~~~~~G~~v~~~~~~~~~a~~~ii~~L~e~g~l~~~~~~~H~yP~cwR~~~pii~r~~~QWFi~~d~~~~~~ 459 (963)
T Consensus 379 ~~g~linS-~~~~gl~~e-------~a~~~~~~~l~~~~~--~--------------q~~v~Y~lrd-W----------- 422 (814)
T COG0495 379 GEGVLINS-GGLDGLDYE-------EAKVKIRCGLVKRGL--G--------------QWFVNYRLRD-W----------- 422 (814)
T ss_pred CCCEEECC-CCCCCCCCH-------HHHHHHHHHHHHHCC--C--------------CEEEECCCCH-H-----------
T ss_conf 47457625-433676405-------679999986887237--8--------------2588514515-7-----------
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCC--CEEE---EE---CCCCCEEECCCHHHHHHH
Q ss_conf 368999987520000024443432024430432000011234567--2258---98---258847325211244421
Q gi|254780445|r 460 STLRSRALSEVEKIRFFPSSGKNRLRSMIENRPDWLLSRQRNWGV--PICF---FY---NEKGEILLDKAINDRIIK 528 (963)
Q Consensus 460 ~~~k~~~l~~i~~v~~~P~~~k~r~~~~i~~~~DW~ISRqR~WG~--PIPi---~~---~e~~~~~~~~~~~~~i~~ 528 (963)
T Consensus 423 --~~srqRywg~pipii~~e~~~~~~~~~d~Lpv~lp~~~~~~gt~~pL~~~~~W~~~s~~~s~~~ret~Tm~~~~~ 497 (814)
T COG0495 423 --LKSRQRYWGEPIPIIHCEDCGVVPVPEDWLPVKLPERVRGLGTGSPLPWDEEWVIESLPDSTAYRETDTMDTFID 497 (814)
T ss_pred --HHHHHHHHCCCCCEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEHHHHHHHCC
T ss_conf --789999708996454742378554736766743664114679889998883617996699853532324657604