HHsearch alignment for GI: 254780445 and conserved domain: COG0525

>COG0525 ValS Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis].
Probab=100.00  E-value=0  Score=1527.11  Aligned_cols=771  Identities=26%  Similarity=0.446  Sum_probs=694.2

Q ss_pred             CCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             88899689779999999864761445405688884899628225588976215778566878998767089826788882
Q gi|254780445|r   21 PMRAKLPQKESELITYWQKIRLFDKIRESAVGRKNFTLHDGPPYANGHIHIGHALNKILKDVIVRSFQMRNFNACFVPGW  100 (963)
Q Consensus        21 p~r~~~~~~E~~~~~~W~~~~~f~~~~~~~~~~~~f~l~dgPPy~nG~lH~GH~~n~~~kDi~~Ry~rm~G~~Vl~~~Gw  100 (963)
T Consensus         2 ~~~ydp~~iE~k~~~~W~~~~~f~~~--~~~~~~~f~I~~PPPNVTG~LHmGHAl~~tl~D~l~RykRM~G~~vl~~pG~   79 (877)
T COG0525           2 PKTYDPKEIEEKWYKKWEESGYFKPD--PNEDKPPFSIDTPPPNVTGSLHMGHALNYTLQDILARYKRMRGYNVLWPPGT   79 (877)
T ss_pred             CCCCCHHHHHHHHHHHHHHCCCCCCC--CCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCC
T ss_conf             98778466508998778866985678--8777897279689799888651165453789999999987079733357987


Q ss_pred             CCCCCHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEECCCHHHHHHHHHHHHHH
Q ss_conf             44420899999998765599833489999999999999999999999999706077636981157767989999999999
Q gi|254780445|r  101 DCHGLPIEWKVENEYLAKGKKKDDIPVNEFRQACRDSASAWVKIQSKEFQRLGIVGDFENPYTTMTRESEAQIASELLKI  180 (963)
Q Consensus       101 D~hGLPiE~~vek~l~~~~~~~~~~~~~~~~~~c~~~a~~~i~~~~~~~~rlG~~~Dw~~~y~T~dp~y~~~~~~~F~~l  180 (963)
T Consensus        80 DhAGIaTq~~VEk~l~~~g~~r~d~gRe~Fl~~~weWk~e~~~~I~~Q~~rLG~S~DWsrE~fTmD~~~s~av~~~Fv~L  159 (877)
T COG0525          80 DHAGIATQVVVEKQLAAEGITRHDLGREEFLKKCWEWKEESGGTIREQLRRLGVSVDWSRERFTMDPGLSRAVQEAFVRL  159 (877)
T ss_pred             CCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf             77883089999999987098801058999999999999999899999999847873555311267988999999999999


Q ss_pred             HHCCCEECCCCEEEECCCCCCCCCCHHHEEEEEECCEEEEEEEECCCCCCCCCCCCCHHCCHHHHHHHHHHHHCCCCCCE
Q ss_conf             98796110343022057435736500210132105779998330375311220011000000578865445322776745
Q gi|254780445|r  181 AESDQIYRGIKPIMWSIAEQTTLAEAEIEYHDVDSDSILVGFPVKSSADYLIKSQIVIWTTTPWTIPGNRAIAFSSNHQY  260 (963)
Q Consensus       181 ~~kGliyr~~~pV~w~p~~~T~La~~Evey~d~~~~s~~v~F~l~~~~~~~~~~~~~iwTTrP~Tl~~n~ai~v~p~~~Y  260 (963)
T Consensus       160 y~~GlIYr~~~lVNWcP~~~TAiSd~EVe~~e~~g~L~~i~y~l~~~~~-----~i~VATTRPEtmlgdtAVaVhP~D--  232 (877)
T COG0525         160 YEKGLIYRGERLVNWCPKCRTAISDIEVEYKEVEGKLYYIKYPLADGDG-----YLVVATTRPETLLGDTAVAVHPDD--  232 (877)
T ss_pred             HHCCCEEECCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEEEECCCCCC-----EEEEEECCCCCCCCCEEEEECCCC--
T ss_conf             9789465148743478863340204450001100368999975389986-----389981686301026699989987--


Q ss_pred             EEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCCCCEEEECCCCCCCCCCCC
Q ss_conf             89983066531111237435512111888887609851784100111112857543137866512551144322332244
Q gi|254780445|r  261 GLYDVISCSGQHTFDTGKKLIISKNLAQSIANQTNVKIALVCDVKAEDLSKTMCSHPLKKLGYTFSVPLIDAEYVANDCG  340 (963)
Q Consensus       261 ~~~~~~~~~~~~~~~~~~~~i~a~~~~~~~~~~~~~~~~~~~~~~g~~l~g~~~~~Pl~~~~~~~~~pi~~~d~V~~~~G  340 (963)
T Consensus       233 -------------------------------------------eRYk~LvGk~v~lPl~~----r~IpIiaD~~VD~eFG  265 (877)
T COG0525         233 -------------------------------------------ERYKHLVGKEVILPLVG----REIPIIADEYVDPEFG  265 (877)
T ss_pred             -------------------------------------------HHHHHHCCCEEECCCCC----CEEEEECCCCCCCCCC
T ss_conf             -------------------------------------------66686358889646889----7533534733477678


Q ss_pred             CCEEEEECCCCHHHHHHHHHCCCHHHHHCCCEEEEECCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf             5405640578988989987605212210022034302344551024310-017863211355444567545235664798
Q gi|254780445|r  341 TGFVHVAPSHGVEDFTAWNEAKDILLNRSVDIKVPSPVDGRGFYTTEAP-GFSGARVLDDAGEKGNANEVVIAALINACA  419 (963)
Q Consensus       341 TG~Vh~aPahg~~Dy~~~~~~~~~~~~~~~~l~~~~~vd~~G~~~~~~~-~~~G~~v~~~~~~~~~a~~~ii~~L~e~g~  419 (963)
T Consensus       266 TG~VkItpahD~nD~e---------~~krh~Lp~i~i~d~dG~in~~~~~~~~Gl~r~e-------AR~kIv~~L~~~Gl  329 (877)
T COG0525         266 TGAVKITPAHDFNDYE---------VGKRHNLPLINIIDEDGRINEEAAGEFAGLDRFE-------ARKKIVEDLEEQGL  329 (877)
T ss_pred             CCEEEECCCCCCCHHH---------HHHCCCCCCEEEECCCCEECCCCCCCCCCCCHHH-------HHHHHHHHHHHCCC
T ss_conf             7418971699940654---------5301798720688899705467764458986999-------99999999996899


Q ss_pred             CCCHHHHCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHH--CCCCCCCCCCCCHHHHHHCCCCCCCC
Q ss_conf             2100000012211321013203333102366302245542368999987520--00002444343202443043200001
Q gi|254780445|r  420 ILNRSIVKHSYPHSWRSKKPIIFRTTSQWFLHMDKKLGDGSTLRSRALSEVE--KIRFFPSSGKNRLRSMIENRPDWLLS  497 (963)
Q Consensus       420 l~~~~~~~H~yP~cwR~~~pii~r~~~QWFi~~d~~~~~~~~~k~~~l~~i~--~v~~~P~~~k~r~~~~i~~~~DW~IS  497 (963)
T Consensus       330 Lvk~e~~~h~V~~~~R~g~~IEp~ls~QWfVk~~~-------la~~~l~~~~~g~i~f~P~~~~~~~~~W~~~i~DWcIS  402 (877)
T COG0525         330 LVKIEPHKHSVGHCERCGTPIEPLLSKQWFVKVLE-------LAKKALEAVKDGKIKFVPERMEKRYEDWMENIRDWCIS  402 (877)
T ss_pred             EEEEEECCCCCCCCCCCCCEEEEEECCEEEEEHHH-------HHHHHHHHHHCCCCEEECHHHHHHHHHHHHHCCCCEEE
T ss_conf             67664445417611677960201232421487075-------26999998745984681688998899998638376422


Q ss_pred             CCCCCCCCEEEEEC-CCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             12345672258982-58847325211244421222118874335640111468878875545664210000333545433
Q gi|254780445|r  498 RQRNWGVPICFFYN-EKGEILLDKAINDRIIKTFKDQGSDAWFSEGSRDFFLGDRASEPWIQSKDILDVWFDSACTHTIL  576 (963)
Q Consensus       498 RqR~WG~PIPi~~~-e~~~~~~~~~~~~~i~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~r~~DvlDvWfDSg~s~~~~  576 (963)
T Consensus       403 RQlwwGh~IPvWy~~~~g~v~v~~~~~~-----------~~~-----~---~~~~~~~~~~qd~DVLDTWFSS~LwPfst  463 (877)
T COG0525         403 RQLWWGHRIPVWYCKECGNVVVAEEEPE-----------DPA-----A---AEKCPKEELEQDEDVLDTWFSSSLWPFST  463 (877)
T ss_pred             EEEECCCCCCEEEECCCCCEEECCCCCC-----------CHH-----H---HCCCCHHCCCCCCCHHHHHHHCCCCCCCC
T ss_conf             2113176351599669983896786543-----------535-----4---24682202057852323324115646400


Q ss_pred             CCC-----CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCCCHHCCCCCCCCHHHHHCCC
Q ss_conf             222-----223334431002554442111245544433117840000130378262134530000123443336641136
Q gi|254780445|r  577 LGK-----DPKLAWPADVYLEGSDQHRGWFQHSLLESCATRGSTPFTSLITHGFSVDENGEKMSKSKGNVVFPEEIISES  651 (963)
Q Consensus       577 ~~~-----~~~~~~PaD~~~eG~Dq~RgWF~s~ll~~~~~~~~~Pfk~v~~hG~vld~~G~KMSKS~GNvi~p~~ii~~y  651 (963)
T Consensus       464 lgWp~~t~~l~~fyPt~llvtG~DIIffWvarmi~~~~~~~~~~PFk~V~ihGLVrDe~G~KMSKS~GNvIDP~d~I~~y  543 (877)
T COG0525         464 LGWPEETPDLKKFYPTDLLVTGHDIIFFWVARMIMRGLHLTGEVPFKDVYIHGLVRDEQGRKMSKSKGNVIDPLDVIDKY  543 (877)
T ss_pred             CCCCCCCHHHHHCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf             68987444777358873003553133899999999999865899962789811678688888755578858979999884


Q ss_pred             CHHHHHHHHHH-CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             75788788871-78766554431025677764000001100000122444456731011127888754368999999889
Q gi|254780445|r  652 GADVLRYWAVN-SDYHDDQRLGKNIIQTNIDTYRKLRNTIRWMLGMLAHDTGNEPSLADMPALEQLMLHRLTELDQVVRE  730 (963)
Q Consensus       652 GaD~lR~~~~~-~~~~~d~~~~~~~l~~~~~~~~kl~Nt~rf~l~~l~~~~~~~~~~~~l~~~DkwiLskl~~~i~~v~~  730 (963)
T Consensus       544 GaDAlRf~la~~~~~G~Di~~~~~~~~~~rnF~nKlWNa~Rfv~~~~~~~~~~~~~~~~~~~~drWIls~l~~~v~~v~~  623 (877)
T COG0525         544 GADALRFTLASLASPGRDINFDEKRVEGYRNFLNKLWNATRFVLMNLDDLGPDDLDLLALSLADRWILSRLNETVKEVTE  623 (877)
T ss_pred             CHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             85899999995368886657688998889999999874999998525445765433222354889999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
Q ss_conf             87654012266889987863024001010201222789980899999999999999999997000448999999863886
Q gi|254780445|r  731 AYDAFNFKEVVRQLTNFSNAELSSFYFDIRKDSLYCDSPSSLKRLSSIAVIRILCRHLIIWIAPILPFTAEEAWLSLNPE  810 (963)
Q Consensus       731 ~~e~~~f~~a~~~i~~F~~~dLS~~Yld~~Kdrly~~~~~s~~R~s~~~~L~~il~~l~~lLaPi~P~~aEEiw~~l~~~  810 (963)
T Consensus       624 ~ld~y~f~~a~~~ly~F~W~~fcD~YlEl~K~~l~~~---~~~~~~a~~tL~~vl~~~lrLLhPfmPfiTEei~q~l~~~  700 (877)
T COG0525         624 ALDNYRFDEAARALYEFIWNDFCDWYLELAKPRLYGG---EEEKRAARATLYYVLDTLLRLLHPFMPFITEEIWQKLPGT  700 (877)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCC
T ss_conf             9986237889999999969989899999821440285---7778999999999999999984887750157899865898


Q ss_pred             CCCEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHH--CCCCHHHHE
Q ss_conf             773453358899835689899999999999999999999999973899974440389982968999772--211365511
Q gi|254780445|r  811 AVSVHLELFPIIPLEWQNACLSKKWGKILQLRKVVTSALEIERKAKHIGSSLETAPTLYITDSSLISNI--EGENLAEIC  888 (963)
Q Consensus       811 ~~SI~~~~wP~~~~~~~d~~le~~~~~l~~ir~~V~~~le~~R~~k~I~~slea~v~i~~~d~~~l~~l--~~~~L~~~~  888 (963)
T Consensus       701 -~si~~~~~P~~~~~~~d~~a~~~~~~l~~ii~~iR~----~r~e~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~  774 (877)
T COG0525         701 -ESIHLASWPEVDEELIDEEAEKEFELLKEIISAIRN----LRAEMNLSPSAPLKVVLVGS-EELEDRLEANEDDIKGLA  774 (877)
T ss_pred             -CEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHH----HHHHCCCCCCCCEEEEEECC-HHHHHHHHHHHHHHHHHC
T ss_conf             -837841689863110237799999999999999999----99975999888506999431-767999998899999843


Q ss_pred             EECEEEEECC
Q ss_conf             2041699637
Q gi|254780445|r  889 ITSDITIVHS  898 (963)
Q Consensus       889 ivS~v~i~~~  898 (963)
T Consensus       775 ~~~~i~~~~~  784 (877)
T COG0525         775 NLEELEILSP  784 (877)
T ss_pred             CCCEEEECCC
T ss_conf             7545652156