HHsearch alignment for GI: 254780445 and conserved domain: PRK00133

>PRK00133 metG methionyl-tRNA synthetase; Reviewed.
Probab=100.00  E-value=0  Score=607.96  Aligned_cols=478  Identities=26%  Similarity=0.377  Sum_probs=353.7

Q ss_pred             CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCHHHHHHH
Q ss_conf             84899628225588976215778566878998767089826788882444208999999987655998334899999999
Q gi|254780445|r   54 KNFTLHDGPPYANGHIHIGHALNKILKDVIVRSFQMRNFNACFVPGWDCHGLPIEWKVENEYLAKGKKKDDIPVNEFRQA  133 (963)
Q Consensus        54 ~~f~l~dgPPy~nG~lH~GH~~n~~~kDi~~Ry~rm~G~~Vl~~~GwD~hGLPiE~~vek~l~~~~~~~~~~~~~~~~~~  133 (963)
T Consensus         2 k~~~iTt~ipY~Ng~~HiGH~~~~i~aDv~aRy~Rl~G~~v~f~~GtDeHG~~i~~~A~~~----g-----~tp~-----   67 (666)
T PRK00133          2 RKILVTCALPYANGPIHLGHLLEYIQADIWVRYQRMRGHEVLFVCADDAHGTPIMLKAEKE----G-----ITPE-----   67 (666)
T ss_pred             CCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHC----C-----CCHH-----
T ss_conf             8779817987888984312467699999999999836995498474278848999999985----9-----9999-----


Q ss_pred             HHHHHHHHHHHHHHHHHHCCEEEECCCCEECCCHHHHHHHHHHHHHHHHCCCEECCCCEEEECCCCCCCCCCHHHEEEEE
Q ss_conf             99999999999999999706077636981157767989999999999987961103430220574357365002101321
Q gi|254780445|r  134 CRDSASAWVKIQSKEFQRLGIVGDFENPYTTMTRESEAQIASELLKIAESDQIYRGIKPIMWSIAEQTTLAEAEIEYHDV  213 (963)
Q Consensus       134 c~~~a~~~i~~~~~~~~rlG~~~Dw~~~y~T~dp~y~~~~~~~F~~l~~kGliyr~~~pV~w~p~~~T~La~~Evey~d~  213 (963)
T Consensus        68 --e~~d~~~~~~~~~~~~l~Is~D--~f~rTt~~~h~~~vq~~f~~l~~~G~iy~~~~~~~Yc~~~e~fl~Dr~V~---G  140 (666)
T PRK00133         68 --ELIARYHAEHKRDFAGFGISFD--NYGSTHSEENRELAQEIYLKLKENGYIYERTIEQLYDPEKGMFLPDRFVK---G  140 (666)
T ss_pred             --HHHHHHHHHHHHHHHHCCCCCC--CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCEEE---E
T ss_conf             --9999999999999998399578--78578988999999999999997899897403555668756552542342---0


Q ss_pred             ECCEEEEEEEECCCCCCCCCCCCCHHCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHH
Q ss_conf             05779998330375311220011000000578865445322776745899830665311112374355121118888876
Q gi|254780445|r  214 DSDSILVGFPVKSSADYLIKSQIVIWTTTPWTIPGNRAIAFSSNHQYGLYDVISCSGQHTFDTGKKLIISKNLAQSIANQ  293 (963)
Q Consensus       214 ~~~s~~v~F~l~~~~~~~~~~~~~iwTTrP~Tl~~n~ai~v~p~~~Y~~~~~~~~~~~~~~~~~~~~i~a~~~~~~~~~~  293 (963)
                                                                                                      
T Consensus       141 --------------------------------------------------------------------------------  140 (666)
T PRK00133        141 --------------------------------------------------------------------------------  140 (666)
T ss_pred             --------------------------------------------------------------------------------
T ss_conf             --------------------------------------------------------------------------------


Q ss_pred             CCCCEEEEEECCCCCCCCCEEEECCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHCCCEE
Q ss_conf             09851784100111112857543137866512551144322332244540564057898898998760521221002203
Q gi|254780445|r  294 TNVKIALVCDVKAEDLSKTMCSHPLKKLGYTFSVPLIDAEYVANDCGTGFVHVAPSHGVEDFTAWNEAKDILLNRSVDIK  373 (963)
Q Consensus       294 ~~~~~~~~~~~~g~~l~g~~~~~Pl~~~~~~~~~pi~~~d~V~~~~GTG~Vh~aPahg~~Dy~~~~~~~~~~~~~~~~l~  373 (963)
T Consensus       141 ----------------------------------------------------tCP~C~~~~~~-----GD~---------  154 (666)
T PRK00133        141 ----------------------------------------------------TCPKCGAEDQY-----GDN---------  154 (666)
T ss_pred             ----------------------------------------------------ECCCCCCHHHC-----CCC---------
T ss_conf             ----------------------------------------------------25777871204-----874---------


Q ss_pred             EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCEEEEEEEEEEEEEC
Q ss_conf             43023445510243100178632113554445675452356647982100000012211321013203333102366302
Q gi|254780445|r  374 VPSPVDGRGFYTTEAPGFSGARVLDDAGEKGNANEVVIAALINACAILNRSIVKHSYPHSWRSKKPIIFRTTSQWFLHMD  453 (963)
Q Consensus       374 ~~~~vd~~G~~~~~~~~~~G~~v~~~~~~~~~a~~~ii~~L~e~g~l~~~~~~~H~yP~cwR~~~pii~r~~~QWFi~~d  453 (963)
T Consensus       155 --C---------e~----cG~~~-~-------p~-----eL~--------------~p~~~~~g~~~e~~~~e~~ff~Ls  192 (666)
T PRK00133        155 --C---------EV----CGATY-S-------PT-----ELI--------------NPKSAISGATPVLKESEHFFFKLP  192 (666)
T ss_pred             --C---------CC----CCCCC-C-------CH-----HHC--------------CCCCCCCCCCCEEECCCCHHHHHH
T ss_conf             --2---------24----56516-7-------34-----423--------------864345798516603533331387


Q ss_pred             CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH-CCCCCCCCCCCCC-CCCEEEEECCCCCEEECCCHHHHHHHHHH
Q ss_conf             245542368999987520000024443432024430-4320000112345-67225898258847325211244421222
Q gi|254780445|r  454 KKLGDGSTLRSRALSEVEKIRFFPSSGKNRLRSMIE-NRPDWLLSRQRNW-GVPICFFYNEKGEILLDKAINDRIIKTFK  531 (963)
Q Consensus       454 ~~~~~~~~~k~~~l~~i~~v~~~P~~~k~r~~~~i~-~~~DW~ISRqR~W-G~PIPi~~~e~~~~~~~~~~~~~i~~~~~  531 (963)
T Consensus       193 ~-------~~~~L~~~~~~~~~-~~~~~n~~~~~l~~gL~D~~ISR~~~W~GipvP~---~~~-----------------  244 (666)
T PRK00133        193 D-------FEEFLKEWTRSGAL-QPNVANKMKEWLEEGLQDWDISRDAPYFGFEIPG---APG-----------------  244 (666)
T ss_pred             H-------HHHHHHHHHCCCCC-CHHHHHHHHHHHHCCCCCCCEEEECCCCCEECCC---CCC-----------------
T ss_conf             7-------77899875104889-8789999999985788775304027844458889---876-----------------


Q ss_pred             HCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC-------CCCCCCCCCCCCCCC-----CCCCCCCCCCH
Q ss_conf             118874335640111468878875545664210000333545-------433222223334431-----00255444211
Q gi|254780445|r  532 DQGSDAWFSEGSRDFFLGDRASEPWIQSKDILDVWFDSACTH-------TILLGKDPKLAWPAD-----VYLEGSDQHRG  599 (963)
Q Consensus       532 ~~g~d~~~~~~~~~~~~~~~~~~~~~r~~DvlDvWfDSg~s~-------~~~~~~~~~~~~PaD-----~~~eG~Dq~Rg  599 (963)
T Consensus       245 -----------------------------kv~YVW~DA~igYis~t~~~~~~~~~~~~~~W~~d~~~~~vhfiGKDii~-  294 (666)
T PRK00133        245 -----------------------------KVFYVWLDAPIGYISSTKNLCDKRGLDWDEYWKKDSDTELYHFIGKDIIY-  294 (666)
T ss_pred             -----------------------------EEEEEEECCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCEEEECCCCHHH-
T ss_conf             -----------------------------48999615645377764433143565587638899876336753443114-


Q ss_pred             HHHHHHHHHHHCC-C-CCEEEEECCCCCEECCCCCCHHCCCCCCCCHHHHHCCCCHHHHHHHHHH-CCCC-CCCCCCCHH
Q ss_conf             1245544433117-8-4000013037826213453000012344333664113675788788871-7876-655443102
Q gi|254780445|r  600 WFQHSLLESCATR-G-STPFTSLITHGFSVDENGEKMSKSKGNVVFPEEIISESGADVLRYWAVN-SDYH-DDQRLGKNI  675 (963)
Q Consensus       600 WF~s~ll~~~~~~-~-~~Pfk~v~~hG~vld~~G~KMSKS~GNvi~p~~ii~~yGaD~lR~~~~~-~~~~-~d~~~~~~~  675 (963)
T Consensus       295 -FH~i~wPa~L~~~g~~lP-~~v~~hg~l~-~~G~KmSKS~Gnvv~p~~~l~~yg~D~lRY~l~~~~p~~~~D~dfs~~~  371 (666)
T PRK00133        295 -FHTLFWPAMLEGAGYRLP-TNVFAHGFLT-VEGAKMSKSRGTFIWARTYLDHLDPDYLRYYLAAKLPSRIDDIDFNWED  371 (666)
T ss_pred             -HHHHHHHHHHHHCCCCCC-CCCCCCCCEE-ECCEEEECCCCEEEEHHHHHHHCCCCCEEHHHHHCCCCCCCCCCCCHHH
T ss_conf             -647679999984677888-6121146487-7880600126717617999986696453020331078987677869999


Q ss_pred             HHHHH--HHHHHHCCCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             56777--640000011000001224-444567310111278887543689999998898765401226688998786302
Q gi|254780445|r  676 IQTNI--DTYRKLRNTIRWMLGMLA-HDTGNEPSLADMPALEQLMLHRLTELDQVVREAYDAFNFKEVVRQLTNFSNAEL  752 (963)
Q Consensus       676 l~~~~--~~~~kl~Nt~rf~l~~l~-~~~~~~~~~~~l~~~DkwiLskl~~~i~~v~~~~e~~~f~~a~~~i~~F~~~dL  752 (963)
T Consensus       372 ~~~r~NsdLan~lGNl~~R~~~~~~k~~~g~vp~----~~~d~~l~~~~~~~~~~~~~~~~~~~~~~Al~~i~~l~~--~  445 (666)
T PRK00133        372 FQQRVNSDLVGKLVNFASRAAGFINKRFDGKLPD----ELADPELLEEFRAAAESIAEAYEAREFRKALREIMALAD--R  445 (666)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC----CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH--H
T ss_conf             9999868888766689999999999865997899----745899999999999999999981069999999999999--9


Q ss_pred             CCCHHHCCCHHHCCCCCCCHHHHHHHHHHHH---HHHHHHHHHCCHHHHHHHHHHHHCCC
Q ss_conf             4001010201222789980899999999999---99999999700044899999986388
Q gi|254780445|r  753 SSFYFDIRKDSLYCDSPSSLKRLSSIAVIRI---LCRHLIIWIAPILPFTAEEAWLSLNP  809 (963)
Q Consensus       753 S~~Yld~~Kdrly~~~~~s~~R~s~~~~L~~---il~~l~~lLaPi~P~~aEEiw~~l~~  809 (963)
T Consensus       446 ~NkYi~~~~P--W~L~K~d~~~~~l~~Vl~~~le~lr~laiLL~PfmP~~a~ki~~~Lg~  503 (666)
T PRK00133        446 ANKYVDDKEP--WKLAKQEGEDAALQEVCSVGLNLFRALAIYLKPVLPELAERAEAFLNV  503 (666)
T ss_pred             HHHHHHHCCC--HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
T ss_conf             9888774487--655368566899999999999999999997238673789999998098