HHsearch alignment for GI: 254780445 and conserved domain: PRK05729

>PRK05729 valS valyl-tRNA synthetase; Reviewed.
Probab=100.00  E-value=0  Score=1701.65  Aligned_cols=775  Identities=27%  Similarity=0.434  Sum_probs=707.7

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf             99888996897799999998647614454056888848996282255889762157785668789987670898267888
Q gi|254780445|r   19 DFPMRAKLPQKESELITYWQKIRLFDKIRESAVGRKNFTLHDGPPYANGHIHIGHALNKILKDVIVRSFQMRNFNACFVP   98 (963)
Q Consensus        19 ~Fp~r~~~~~~E~~~~~~W~~~~~f~~~~~~~~~~~~f~l~dgPPy~nG~lH~GH~~n~~~kDi~~Ry~rm~G~~Vl~~~   98 (963)
T Consensus         2 e~~~~Y~~~~iE~k~~~~W~~~~~f~~--~~~~~~~~f~~~~pPP~~~G~lHiGHa~~~~i~D~i~Ry~rm~G~~V~~~p   79 (877)
T PRK05729          2 ELPKTYDPKEVEAKWYQKWEEKGYFKP--DGDKSKKPFSIVIPPPNVTGSLHMGHALNNTLQDILIRYKRMQGYNTLWLP   79 (877)
T ss_pred             CCCCCCCHHHHHHHHHHHHHHCCCCCC--CCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf             885789939999999999985799737--877899977997288988798612166748899999999872799668889


Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEECCCHHHHHHHHHHHH
Q ss_conf             82444208999999987655998334899999999999999999999999997060776369811577679899999999
Q gi|254780445|r   99 GWDCHGLPIEWKVENEYLAKGKKKDDIPVNEFRQACRDSASAWVKIQSKEFQRLGIVGDFENPYTTMTRESEAQIASELL  178 (963)
Q Consensus        99 GwD~hGLPiE~~vek~l~~~~~~~~~~~~~~~~~~c~~~a~~~i~~~~~~~~rlG~~~Dw~~~y~T~dp~y~~~~~~~F~  178 (963)
T Consensus        80 G~D~~Gl~~e~~vek~l~~~g~~~~~~~re~f~~~~~~w~~~~~~~i~~q~~rlG~s~Dw~~~~~T~d~~~~~~v~~~F~  159 (877)
T PRK05729         80 GTDHAGIATQMVVERQLAAEGKTRHDLGREKFLEKVWEWKEESGGTITNQLRRLGASVDWSRERFTMDEGLSKAVREVFV  159 (877)
T ss_pred             CCCCCCCHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHH
T ss_conf             86888605689999999874998354489999999999999999999999998286033589845589889999999999


Q ss_pred             HHHHCCCEECCCCEEEECCCCCCCCCCHHHEEEEEECCEEEEEEEECCCCCCCCCCCCCHHCCHHHHHHHHHHHHCCCCC
Q ss_conf             99987961103430220574357365002101321057799983303753112200110000005788654453227767
Q gi|254780445|r  179 KIAESDQIYRGIKPIMWSIAEQTTLAEAEIEYHDVDSDSILVGFPVKSSADYLIKSQIVIWTTTPWTIPGNRAIAFSSNH  258 (963)
Q Consensus       179 ~l~~kGliyr~~~pV~w~p~~~T~La~~Evey~d~~~~s~~v~F~l~~~~~~~~~~~~~iwTTrP~Tl~~n~ai~v~p~~  258 (963)
T Consensus       160 ~L~~kGliyr~~~~V~wcp~~~Tals~~EV~~~~~~~~~~~ikf~l~~~~-----~~l~i~TTrPeTl~~~~avav~P~d  234 (877)
T PRK05729        160 RLYEKGLIYRGKRLVNWDPKLQTALSDLEVEYKEVKGKLWHIRYPLADGS-----DYLVVATTRPETMLGDTAVAVNPED  234 (877)
T ss_pred             HHHHCCCEEECCEECCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCC-----CEEEEECCCCCCCCCCEEEEECCCC
T ss_conf             99988997841312366887788435678732456673389841324788-----7476501685234464578846887


Q ss_pred             CEEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCCCCEEEECCCCCCCCCC
Q ss_conf             45899830665311112374355121118888876098517841001111128575431378665125511443223322
Q gi|254780445|r  259 QYGLYDVISCSGQHTFDTGKKLIISKNLAQSIANQTNVKIALVCDVKAEDLSKTMCSHPLKKLGYTFSVPLIDAEYVAND  338 (963)
Q Consensus       259 ~Y~~~~~~~~~~~~~~~~~~~~i~a~~~~~~~~~~~~~~~~~~~~~~g~~l~g~~~~~Pl~~~~~~~~~pi~~~d~V~~~  338 (963)
T Consensus       235 e---------------------------------------------ry~~l~Gk~~~~P~~~----~~ipii~d~~V~~~  265 (877)
T PRK05729        235 E---------------------------------------------RYKHLIGKKVILPLVG----REIPIIADEYVDPE  265 (877)
T ss_pred             H---------------------------------------------HHHHHCCCEEEECCCC----CEEEEEECCCCCCC
T ss_conf             4---------------------------------------------8898559889805889----75328715752677


Q ss_pred             CCCCEEEEECCCCHHHHHHHHHCCCHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
Q ss_conf             44540564057898898998760521221002203430234455102431001786321135544456754523566479
Q gi|254780445|r  339 CGTGFVHVAPSHGVEDFTAWNEAKDILLNRSVDIKVPSPVDGRGFYTTEAPGFSGARVLDDAGEKGNANEVVIAALINAC  418 (963)
Q Consensus       339 ~GTG~Vh~aPahg~~Dy~~~~~~~~~~~~~~~~l~~~~~vd~~G~~~~~~~~~~G~~v~~~~~~~~~a~~~ii~~L~e~g  418 (963)
T Consensus       266 ~GTG~V~~~Pah~~~D~~---------~~~~~~L~~~~~id~~G~~~~~~~~~~G~~~~~-------ar~~Ii~~L~~~g  329 (877)
T PRK05729        266 FGTGAVKITPAHDFNDFE---------VGKRHNLPMINIMDEDGTINENAGEYQGLDRFE-------ARKAIVADLEELG  329 (877)
T ss_pred             CCCCCEEECCCCCHHHHH---------HHHHCCCCCCCCCCCCCCCCCCCHHCCCCCHHH-------HHHHHHHHHHHCC
T ss_conf             784617971689978999---------887648874346566764045741029970889-------8899999999779


Q ss_pred             CCCCHHHHCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHH--CCCCCCCCCCCCHHHHHHCCCCCCC
Q ss_conf             82100000012211321013203333102366302245542368999987520--0000244434320244304320000
Q gi|254780445|r  419 AILNRSIVKHSYPHSWRSKKPIIFRTTSQWFLHMDKKLGDGSTLRSRALSEVE--KIRFFPSSGKNRLRSMIENRPDWLL  496 (963)
Q Consensus       419 ~l~~~~~~~H~yP~cwR~~~pii~r~~~QWFi~~d~~~~~~~~~k~~~l~~i~--~v~~~P~~~k~r~~~~i~~~~DW~I  496 (963)
T Consensus       330 ~l~~~~~~~h~~p~~~R~~~pi~~~~~~QWFi~~~~-------l~~~~l~~~~~~~i~~~P~~~~~~~~~wl~n~~DWcI  402 (877)
T PRK05729        330 LLVKIEPHKHSVGHSDRSGVVIEPYLSDQWFVKMKP-------LAKPALEAVEDGKIKFVPKRWENTYFHWMENIQDWCI  402 (877)
T ss_pred             CEEEEEECCCCCCCCCCCCCEEEEECCCCCEECCCH-------HHHHHHHHHHCCCCEECCHHHHHHHHHHHHCCCCCCC
T ss_conf             977432135678754677856997413010000335-------7999999860588312577888499998605655511


Q ss_pred             CCCCCCCCCEEEEECCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             11234567225898258847325211244421222118874335640111468878875545664210000333545433
Q gi|254780445|r  497 SRQRNWGVPICFFYNEKGEILLDKAINDRIIKTFKDQGSDAWFSEGSRDFFLGDRASEPWIQSKDILDVWFDSACTHTIL  576 (963)
Q Consensus       497 SRqR~WG~PIPi~~~e~~~~~~~~~~~~~i~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~r~~DvlDvWfDSg~s~~~~  576 (963)
T Consensus       403 SRqr~WG~piPvw~~~~~~~~v~~~~~----------------------~~~~~~~~~~~~~d~DVlDtWFsSgl~p~s~  460 (877)
T PRK05729        403 SRQLWWGHRIPAWYDEDGEVYVGRTEP----------------------EARAKAGSENLTQDEDVLDTWFSSALWPFST  460 (877)
T ss_pred             CCCCCCCCCEEEEECCCCCEEECCCHH----------------------HHHHHCCCCCCEECCCCCCCHHHCCCCCCCC
T ss_conf             355446884258991898489416756----------------------6443238765255653223344316666441


Q ss_pred             CC-----CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCCCHHCCCCCCCCHHHHHCCC
Q ss_conf             22-----2223334431002554442111245544433117840000130378262134530000123443336641136
Q gi|254780445|r  577 LG-----KDPKLAWPADVYLEGSDQHRGWFQHSLLESCATRGSTPFTSLITHGFSVDENGEKMSKSKGNVVFPEEIISES  651 (963)
Q Consensus       577 ~~-----~~~~~~~PaD~~~eG~Dq~RgWF~s~ll~~~~~~~~~Pfk~v~~hG~vld~~G~KMSKS~GNvi~p~~ii~~y  651 (963)
T Consensus       461 lg~p~~~~~~~~~~P~d~~~~G~Dii~fWv~rm~~~~~~~~~~~Pfk~v~~hG~v~D~~G~KMSKS~GNvidP~~vi~~y  540 (877)
T PRK05729        461 LGWPDKTPDLKRFYPTSVLVTGFDIIFFWVARMIMMGLHFTGQVPFKDVYIHGLVRDEQGRKMSKSKGNVIDPLDLIDKY  540 (877)
T ss_pred             CCCCCCHHHHCCCCCCCCCCCCCCHHEEEEEEEECCEEEECCCCCCHHCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHC
T ss_conf             66865205442478875452065521134444431032011237611020044378898877878788989989999871


Q ss_pred             CHHHHHHHHHH-CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             75788788871-78766554431025677764000001100000122444456-73101112788875436899999988
Q gi|254780445|r  652 GADVLRYWAVN-SDYHDDQRLGKNIIQTNIDTYRKLRNTIRWMLGMLAHDTGN-EPSLADMPALEQLMLHRLTELDQVVR  729 (963)
Q Consensus       652 GaD~lR~~~~~-~~~~~d~~~~~~~l~~~~~~~~kl~Nt~rf~l~~l~~~~~~-~~~~~~l~~~DkwiLskl~~~i~~v~  729 (963)
T Consensus       541 GaDalR~~l~~~~~~g~di~~~~~~v~~~r~f~nKlwN~~rf~~~~~~~~~~~~~~~~~~~~~~D~WIlskL~~~i~~v~  620 (877)
T PRK05729        541 GADALRFTLAALASPGRDIRFDEERVEGYRNFANKLWNASRFVLMNLEGQDPGFLPDEAELSLADRWILSRLNRTVAEVT  620 (877)
T ss_pred             CHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             91999999997077676600068999999999999999999999724656644456621067879999999999999998


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
Q ss_conf             98765401226688998786302400101020122278998089999999999999999999700044899999986388
Q gi|254780445|r  730 EAYDAFNFKEVVRQLTNFSNAELSSFYFDIRKDSLYCDSPSSLKRLSSIAVIRILCRHLIIWIAPILPFTAEEAWLSLNP  809 (963)
Q Consensus       730 ~~~e~~~f~~a~~~i~~F~~~dLS~~Yld~~Kdrly~~~~~s~~R~s~~~~L~~il~~l~~lLaPi~P~~aEEiw~~l~~  809 (963)
T Consensus       621 ~~~~~y~f~~a~~~ly~F~w~d~cdwYlE~~K~rl~~~--~~~~~~~~~~~L~~vL~~~L~lLhPfmPFitEElwq~L~~  698 (877)
T PRK05729        621 EALDKYRFDEAAQALYEFIWNEFCDWYLELAKPVLNGG--DEAAKRGTRATLAYVLEEILRLLHPFMPFITEELWQKLAP  698 (877)
T ss_pred             HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
T ss_conf             75000209999999999846755789999979977088--7788999999999999999998560135759999985778


Q ss_pred             CCCCEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHC--CCCHHHH
Q ss_conf             67734533588998356898999999999999999999999999738999744403899829689997722--1136551
Q gi|254780445|r  810 EAVSVHLELFPIIPLEWQNACLSKKWGKILQLRKVVTSALEIERKAKHIGSSLETAPTLYITDSSLISNIE--GENLAEI  887 (963)
Q Consensus       810 ~~~SI~~~~wP~~~~~~~d~~le~~~~~l~~ir~~V~~~le~~R~~k~I~~slea~v~i~~~d~~~l~~l~--~~~L~~~  887 (963)
T Consensus       699 ~~~si~~~~wP~~~~~~~d~~~e~~~~~~~eiI~~iRs----~R~e~nI~~k~~l~v~i~~~~~~~~~~l~~~~~~I~~L  774 (877)
T PRK05729        699 EGESIMLAPWPEADEALIDEAAEADFEWLKELITAIRN----IRAEMNIPPSKKLPLLLKGADAEDRARLERNEAYIKRL  774 (877)
T ss_pred             CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH----HHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
T ss_conf             89746863799997100798999999999999999999----99972989898205999729889999999989999998


Q ss_pred             EEECEEEEECCCC
Q ss_conf             1204169963777
Q gi|254780445|r  888 CITSDITIVHSNG  900 (963)
Q Consensus       888 ~ivS~v~i~~~~~  900 (963)
T Consensus       775 a~~~~i~~~~~~~  787 (877)
T PRK05729        775 ARLESIEILAEGE  787 (877)
T ss_pred             HCCCEEEECCCCC
T ss_conf             5877068657777