HHsearch alignment for GI: 254780445 and conserved domain: PRK05729
>PRK05729 valS valyl-tRNA synthetase; Reviewed.
Probab=100.00 E-value=0 Score=1701.65 Aligned_cols=775 Identities=27% Similarity=0.434 Sum_probs=707.7
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 99888996897799999998647614454056888848996282255889762157785668789987670898267888
Q gi|254780445|r 19 DFPMRAKLPQKESELITYWQKIRLFDKIRESAVGRKNFTLHDGPPYANGHIHIGHALNKILKDVIVRSFQMRNFNACFVP 98 (963)
Q Consensus 19 ~Fp~r~~~~~~E~~~~~~W~~~~~f~~~~~~~~~~~~f~l~dgPPy~nG~lH~GH~~n~~~kDi~~Ry~rm~G~~Vl~~~ 98 (963)
T Consensus 2 e~~~~Y~~~~iE~k~~~~W~~~~~f~~--~~~~~~~~f~~~~pPP~~~G~lHiGHa~~~~i~D~i~Ry~rm~G~~V~~~p 79 (877)
T PRK05729 2 ELPKTYDPKEVEAKWYQKWEEKGYFKP--DGDKSKKPFSIVIPPPNVTGSLHMGHALNNTLQDILIRYKRMQGYNTLWLP 79 (877)
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCCC--CCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 885789939999999999985799737--877899977997288988798612166748899999999872799668889
Q ss_pred CCCCCCCHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEECCCHHHHHHHHHHHH
Q ss_conf 82444208999999987655998334899999999999999999999999997060776369811577679899999999
Q gi|254780445|r 99 GWDCHGLPIEWKVENEYLAKGKKKDDIPVNEFRQACRDSASAWVKIQSKEFQRLGIVGDFENPYTTMTRESEAQIASELL 178 (963)
Q Consensus 99 GwD~hGLPiE~~vek~l~~~~~~~~~~~~~~~~~~c~~~a~~~i~~~~~~~~rlG~~~Dw~~~y~T~dp~y~~~~~~~F~ 178 (963)
T Consensus 80 G~D~~Gl~~e~~vek~l~~~g~~~~~~~re~f~~~~~~w~~~~~~~i~~q~~rlG~s~Dw~~~~~T~d~~~~~~v~~~F~ 159 (877)
T PRK05729 80 GTDHAGIATQMVVERQLAAEGKTRHDLGREKFLEKVWEWKEESGGTITNQLRRLGASVDWSRERFTMDEGLSKAVREVFV 159 (877)
T ss_pred CCCCCCCHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCHHHHHHHHHHHH
T ss_conf 86888605689999999874998354489999999999999999999999998286033589845589889999999999
Q ss_pred HHHHCCCEECCCCEEEECCCCCCCCCCHHHEEEEEECCEEEEEEEECCCCCCCCCCCCCHHCCHHHHHHHHHHHHCCCCC
Q ss_conf 99987961103430220574357365002101321057799983303753112200110000005788654453227767
Q gi|254780445|r 179 KIAESDQIYRGIKPIMWSIAEQTTLAEAEIEYHDVDSDSILVGFPVKSSADYLIKSQIVIWTTTPWTIPGNRAIAFSSNH 258 (963)
Q Consensus 179 ~l~~kGliyr~~~pV~w~p~~~T~La~~Evey~d~~~~s~~v~F~l~~~~~~~~~~~~~iwTTrP~Tl~~n~ai~v~p~~ 258 (963)
T Consensus 160 ~L~~kGliyr~~~~V~wcp~~~Tals~~EV~~~~~~~~~~~ikf~l~~~~-----~~l~i~TTrPeTl~~~~avav~P~d 234 (877)
T PRK05729 160 RLYEKGLIYRGKRLVNWDPKLQTALSDLEVEYKEVKGKLWHIRYPLADGS-----DYLVVATTRPETMLGDTAVAVNPED 234 (877)
T ss_pred HHHHCCCEEECCEECCCCCCCCCHHHHHHHHCCCCCCCEEEEECCCCCCC-----CEEEEECCCCCCCCCCEEEEECCCC
T ss_conf 99988997841312366887788435678732456673389841324788-----7476501685234464578846887
Q ss_pred CEEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCCCCEEEECCCCCCCCCC
Q ss_conf 45899830665311112374355121118888876098517841001111128575431378665125511443223322
Q gi|254780445|r 259 QYGLYDVISCSGQHTFDTGKKLIISKNLAQSIANQTNVKIALVCDVKAEDLSKTMCSHPLKKLGYTFSVPLIDAEYVAND 338 (963)
Q Consensus 259 ~Y~~~~~~~~~~~~~~~~~~~~i~a~~~~~~~~~~~~~~~~~~~~~~g~~l~g~~~~~Pl~~~~~~~~~pi~~~d~V~~~ 338 (963)
T Consensus 235 e---------------------------------------------ry~~l~Gk~~~~P~~~----~~ipii~d~~V~~~ 265 (877)
T PRK05729 235 E---------------------------------------------RYKHLIGKKVILPLVG----REIPIIADEYVDPE 265 (877)
T ss_pred H---------------------------------------------HHHHHCCCEEEECCCC----CEEEEEECCCCCCC
T ss_conf 4---------------------------------------------8898559889805889----75328715752677
Q ss_pred CCCCEEEEECCCCHHHHHHHHHCCCHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
Q ss_conf 44540564057898898998760521221002203430234455102431001786321135544456754523566479
Q gi|254780445|r 339 CGTGFVHVAPSHGVEDFTAWNEAKDILLNRSVDIKVPSPVDGRGFYTTEAPGFSGARVLDDAGEKGNANEVVIAALINAC 418 (963)
Q Consensus 339 ~GTG~Vh~aPahg~~Dy~~~~~~~~~~~~~~~~l~~~~~vd~~G~~~~~~~~~~G~~v~~~~~~~~~a~~~ii~~L~e~g 418 (963)
T Consensus 266 ~GTG~V~~~Pah~~~D~~---------~~~~~~L~~~~~id~~G~~~~~~~~~~G~~~~~-------ar~~Ii~~L~~~g 329 (877)
T PRK05729 266 FGTGAVKITPAHDFNDFE---------VGKRHNLPMINIMDEDGTINENAGEYQGLDRFE-------ARKAIVADLEELG 329 (877)
T ss_pred CCCCCEEECCCCCHHHHH---------HHHHCCCCCCCCCCCCCCCCCCCHHCCCCCHHH-------HHHHHHHHHHHCC
T ss_conf 784617971689978999---------887648874346566764045741029970889-------8899999999779
Q ss_pred CCCCHHHHCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHH--CCCCCCCCCCCCHHHHHHCCCCCCC
Q ss_conf 82100000012211321013203333102366302245542368999987520--0000244434320244304320000
Q gi|254780445|r 419 AILNRSIVKHSYPHSWRSKKPIIFRTTSQWFLHMDKKLGDGSTLRSRALSEVE--KIRFFPSSGKNRLRSMIENRPDWLL 496 (963)
Q Consensus 419 ~l~~~~~~~H~yP~cwR~~~pii~r~~~QWFi~~d~~~~~~~~~k~~~l~~i~--~v~~~P~~~k~r~~~~i~~~~DW~I 496 (963)
T Consensus 330 ~l~~~~~~~h~~p~~~R~~~pi~~~~~~QWFi~~~~-------l~~~~l~~~~~~~i~~~P~~~~~~~~~wl~n~~DWcI 402 (877)
T PRK05729 330 LLVKIEPHKHSVGHSDRSGVVIEPYLSDQWFVKMKP-------LAKPALEAVEDGKIKFVPKRWENTYFHWMENIQDWCI 402 (877)
T ss_pred CEEEEEECCCCCCCCCCCCCEEEEECCCCCEECCCH-------HHHHHHHHHHCCCCEECCHHHHHHHHHHHHCCCCCCC
T ss_conf 977432135678754677856997413010000335-------7999999860588312577888499998605655511
Q ss_pred CCCCCCCCCEEEEECCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 11234567225898258847325211244421222118874335640111468878875545664210000333545433
Q gi|254780445|r 497 SRQRNWGVPICFFYNEKGEILLDKAINDRIIKTFKDQGSDAWFSEGSRDFFLGDRASEPWIQSKDILDVWFDSACTHTIL 576 (963)
Q Consensus 497 SRqR~WG~PIPi~~~e~~~~~~~~~~~~~i~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~r~~DvlDvWfDSg~s~~~~ 576 (963)
T Consensus 403 SRqr~WG~piPvw~~~~~~~~v~~~~~----------------------~~~~~~~~~~~~~d~DVlDtWFsSgl~p~s~ 460 (877)
T PRK05729 403 SRQLWWGHRIPAWYDEDGEVYVGRTEP----------------------EARAKAGSENLTQDEDVLDTWFSSALWPFST 460 (877)
T ss_pred CCCCCCCCCEEEEECCCCCEEECCCHH----------------------HHHHHCCCCCCEECCCCCCCHHHCCCCCCCC
T ss_conf 355446884258991898489416756----------------------6443238765255653223344316666441
Q ss_pred CC-----CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCCCHHCCCCCCCCHHHHHCCC
Q ss_conf 22-----2223334431002554442111245544433117840000130378262134530000123443336641136
Q gi|254780445|r 577 LG-----KDPKLAWPADVYLEGSDQHRGWFQHSLLESCATRGSTPFTSLITHGFSVDENGEKMSKSKGNVVFPEEIISES 651 (963)
Q Consensus 577 ~~-----~~~~~~~PaD~~~eG~Dq~RgWF~s~ll~~~~~~~~~Pfk~v~~hG~vld~~G~KMSKS~GNvi~p~~ii~~y 651 (963)
T Consensus 461 lg~p~~~~~~~~~~P~d~~~~G~Dii~fWv~rm~~~~~~~~~~~Pfk~v~~hG~v~D~~G~KMSKS~GNvidP~~vi~~y 540 (877)
T PRK05729 461 LGWPDKTPDLKRFYPTSVLVTGFDIIFFWVARMIMMGLHFTGQVPFKDVYIHGLVRDEQGRKMSKSKGNVIDPLDLIDKY 540 (877)
T ss_pred CCCCCCHHHHCCCCCCCCCCCCCCHHEEEEEEEECCEEEECCCCCCHHCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHC
T ss_conf 66865205442478875452065521134444431032011237611020044378898877878788989989999871
Q ss_pred CHHHHHHHHHH-CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 75788788871-78766554431025677764000001100000122444456-73101112788875436899999988
Q gi|254780445|r 652 GADVLRYWAVN-SDYHDDQRLGKNIIQTNIDTYRKLRNTIRWMLGMLAHDTGN-EPSLADMPALEQLMLHRLTELDQVVR 729 (963)
Q Consensus 652 GaD~lR~~~~~-~~~~~d~~~~~~~l~~~~~~~~kl~Nt~rf~l~~l~~~~~~-~~~~~~l~~~DkwiLskl~~~i~~v~ 729 (963)
T Consensus 541 GaDalR~~l~~~~~~g~di~~~~~~v~~~r~f~nKlwN~~rf~~~~~~~~~~~~~~~~~~~~~~D~WIlskL~~~i~~v~ 620 (877)
T PRK05729 541 GADALRFTLAALASPGRDIRFDEERVEGYRNFANKLWNASRFVLMNLEGQDPGFLPDEAELSLADRWILSRLNRTVAEVT 620 (877)
T ss_pred CHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 91999999997077676600068999999999999999999999724656644456621067879999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC
Q ss_conf 98765401226688998786302400101020122278998089999999999999999999700044899999986388
Q gi|254780445|r 730 EAYDAFNFKEVVRQLTNFSNAELSSFYFDIRKDSLYCDSPSSLKRLSSIAVIRILCRHLIIWIAPILPFTAEEAWLSLNP 809 (963)
Q Consensus 730 ~~~e~~~f~~a~~~i~~F~~~dLS~~Yld~~Kdrly~~~~~s~~R~s~~~~L~~il~~l~~lLaPi~P~~aEEiw~~l~~ 809 (963)
T Consensus 621 ~~~~~y~f~~a~~~ly~F~w~d~cdwYlE~~K~rl~~~--~~~~~~~~~~~L~~vL~~~L~lLhPfmPFitEElwq~L~~ 698 (877)
T PRK05729 621 EALDKYRFDEAAQALYEFIWNEFCDWYLELAKPVLNGG--DEAAKRGTRATLAYVLEEILRLLHPFMPFITEELWQKLAP 698 (877)
T ss_pred HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC
T ss_conf 75000209999999999846755789999979977088--7788999999999999999998560135759999985778
Q ss_pred CCCCEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHHHHHHC--CCCHHHH
Q ss_conf 67734533588998356898999999999999999999999999738999744403899829689997722--1136551
Q gi|254780445|r 810 EAVSVHLELFPIIPLEWQNACLSKKWGKILQLRKVVTSALEIERKAKHIGSSLETAPTLYITDSSLISNIE--GENLAEI 887 (963)
Q Consensus 810 ~~~SI~~~~wP~~~~~~~d~~le~~~~~l~~ir~~V~~~le~~R~~k~I~~slea~v~i~~~d~~~l~~l~--~~~L~~~ 887 (963)
T Consensus 699 ~~~si~~~~wP~~~~~~~d~~~e~~~~~~~eiI~~iRs----~R~e~nI~~k~~l~v~i~~~~~~~~~~l~~~~~~I~~L 774 (877)
T PRK05729 699 EGESIMLAPWPEADEALIDEAAEADFEWLKELITAIRN----IRAEMNIPPSKKLPLLLKGADAEDRARLERNEAYIKRL 774 (877)
T ss_pred CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH----HHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
T ss_conf 89746863799997100798999999999999999999----99972989898205999729889999999989999998
Q ss_pred EEECEEEEECCCC
Q ss_conf 1204169963777
Q gi|254780445|r 888 CITSDITIVHSNG 900 (963)
Q Consensus 888 ~ivS~v~i~~~~~ 900 (963)
T Consensus 775 a~~~~i~~~~~~~ 787 (877)
T PRK05729 775 ARLESIEILAEGE 787 (877)
T ss_pred HCCCEEEECCCCC
T ss_conf 5877068657777