HHsearch alignment for GI: 254780445 and conserved domain: PRK05743
>PRK05743 ileS isoleucyl-tRNA synthetase; Reviewed.
Probab=100.00 E-value=0 Score=2220.08 Aligned_cols=901 Identities=45% Similarity=0.812 Sum_probs=853.3
Q ss_pred CCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 68676015888999888996897799999998647614454056888848996282255889762157785668789987
Q gi|254780445|r 7 ANYSGTLYLPRTDFPMRAKLPQKESELITYWQKIRLFDKIRESAVGRKNFTLHDGPPYANGHIHIGHALNKILKDVIVRS 86 (963)
Q Consensus 7 ~~y~~tl~lPkt~Fp~r~~~~~~E~~~~~~W~~~~~f~~~~~~~~~~~~f~l~dgPPy~nG~lH~GH~~n~~~kDi~~Ry 86 (963)
T Consensus 2 ~dy~~Tl~lPkT~Fpmr~n~~~~E~~~~~~W~~~~~y~~~~~~~~~~~~f~l~dgPPyanG~lH~GHaln~tlkDii~Ry 81 (910)
T PRK05743 2 MDYKDTLNLPKTDFPMRGNLPKREPEILKRWEENDLYQKIREANKGKPKFILHDGPPYANGDIHIGHALNKILKDIIVKS 81 (910)
T ss_pred CCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 97054117789999988895777499999998779076678616998977982799998986424477878999999999
Q ss_pred HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEECCC
Q ss_conf 67089826788882444208999999987655998334899999999999999999999999997060776369811577
Q gi|254780445|r 87 FQMRNFNACFVPGWDCHGLPIEWKVENEYLAKGKKKDDIPVNEFRQACRDSASAWVKIQSKEFQRLGIVGDFENPYTTMT 166 (963)
Q Consensus 87 ~rm~G~~Vl~~~GwD~hGLPiE~~vek~l~~~~~~~~~~~~~~~~~~c~~~a~~~i~~~~~~~~rlG~~~Dw~~~y~T~d 166 (963)
T Consensus 82 krm~G~~v~~~pGwD~hGLPiE~~v~k~~g---~~~~~~~~~~f~~~cr~~a~~~i~~~~~q~~rlG~~~DW~~~y~T~d 158 (910)
T PRK05743 82 KTMSGFDAPYVPGWDCHGLPIELKVEKKLG---KKRKKLSAAEFRKKCREYALEQVDIQREDFKRLGVLGDWDNPYLTMD 158 (910)
T ss_pred HHCCCCCCCCCCCCCCCCHHHHHHHHHHCC---CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCEECCC
T ss_conf 875899679999658686999999999619---98131999999999999999999999999997190264589726689
Q ss_pred HHHHHHHHHHHHHHHHCCCEECCCCEEEECCCCCCCCCCHHHEEEEEECCEEEEEEEECCCCCC---CCCCCCCHHCCHH
Q ss_conf 6798999999999998796110343022057435736500210132105779998330375311---2200110000005
Q gi|254780445|r 167 RESEAQIASELLKIAESDQIYRGIKPIMWSIAEQTTLAEAEIEYHDVDSDSILVGFPVKSSADY---LIKSQIVIWTTTP 243 (963)
Q Consensus 167 p~y~~~~~~~F~~l~~kGliyr~~~pV~w~p~~~T~La~~Evey~d~~~~s~~v~F~l~~~~~~---~~~~~~~iwTTrP 243 (963)
T Consensus 159 ~~y~~~~~~~F~~l~ekGliYr~~kpV~Wcp~~~TaLA~~EVey~d~~s~si~v~f~l~~~~~~~~~~~~~~~~iwTTtP 238 (910)
T PRK05743 159 FEYEANIIRVLGKMAKKGYLYKGLKPVYWSPDCGSALAEAEVEYHDKTSPSIYVAFPVVDGKAGLDGLKDASLVIWTTTP 238 (910)
T ss_pred HHHHHHHHHHHHHHHHCCCEEECCCCCEECCCCCCCCCCHHEECCCEECCEEEEEEEECCCCCCCCCCCCCEEEEEECCH
T ss_conf 88999999999999986996857823204899994400101005775432599998943763333456774399970884
Q ss_pred HHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHCCC-CEEEEEECCCCCCCCCEEEECCCCCC
Q ss_conf 78865445322776745899830665311112374355121118888876098-51784100111112857543137866
Q gi|254780445|r 244 WTIPGNRAIAFSSNHQYGLYDVISCSGQHTFDTGKKLIISKNLAQSIANQTNV-KIALVCDVKAEDLSKTMCSHPLKKLG 322 (963)
Q Consensus 244 ~Tl~~n~ai~v~p~~~Y~~~~~~~~~~~~~~~~~~~~i~a~~~~~~~~~~~~~-~~~~~~~~~g~~l~g~~~~~Pl~~~~ 322 (963)
T Consensus 239 wTl~~n~avav~p~~~Y~~~~-----------~~~~~iva~~l~~~~~~~~~~~~~~~~~~~~G~~L~g~~~~~P~~~-- 305 (910)
T PRK05743 239 WTLPANQAIAVHPELDYALVE-----------VGEKLILAKDLVESVLKRLGWEDYEVLATFKGAELEGLVAQHPFYD-- 305 (910)
T ss_pred HHHHCCCEEEECCCCCEEECC-----------CCCEEEEHHHHHHHHHHHHCCCCEEEEEEEECCEECCCEEECCCCC--
T ss_conf 034206468877875056403-----------6745541998999999984774306653220535037689767789--
Q ss_pred CCEEEECCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 51255114432233224454056405789889899876052122100220343023445510243100178632113554
Q gi|254780445|r 323 YTFSVPLIDAEYVANDCGTGFVHVAPSHGVEDFTAWNEAKDILLNRSVDIKVPSPVDGRGFYTTEAPGFSGARVLDDAGE 402 (963)
Q Consensus 323 ~~~~~pi~~~d~V~~~~GTG~Vh~aPahg~~Dy~~~~~~~~~~~~~~~~l~~~~~vd~~G~~~~~~~~~~G~~v~~~~~~ 402 (963)
T Consensus 306 --~~~pii~~d~V~~~~GTG~Vh~aPaHg~~D~~---------~~~~~~L~~~~~vd~~G~~~~~~~~~~G~~v~~---- 370 (910)
T PRK05743 306 --RDSPVILGDHVTLDAGTGLVHTAPGHGEDDYV---------VGQKYGLEVLNPVDDDGVYTEEAPLFAGLFVFK---- 370 (910)
T ss_pred --CEEEEEECCCCCCCCCCCEEEECCCCCCHHHH---------HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHH----
T ss_conf --65227844732677776118857879843677---------887649986544587763436774458834998----
Q ss_pred CCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 44567545235664798210000001221132101320333310236630224554236899998752000002444343
Q gi|254780445|r 403 KGNANEVVIAALINACAILNRSIVKHSYPHSWRSKKPIIFRTTSQWFLHMDKKLGDGSTLRSRALSEVEKIRFFPSSGKN 482 (963)
Q Consensus 403 ~~~a~~~ii~~L~e~g~l~~~~~~~H~yP~cwR~~~pii~r~~~QWFi~~d~~~~~~~~~k~~~l~~i~~v~~~P~~~k~ 482 (963)
T Consensus 371 ---a~~~Ii~~L~~~g~L~~~~~~~Hsyp~cwR~~~Pvi~rat~QWFi~~d~-----~~~r~~~l~~i~~v~~~P~~~~~ 442 (910)
T PRK05743 371 ---ANPKIIELLEEKGALLKLEKITHSYPHCWRTKKPIIFRATPQWFISMDK-----KTLREQALKAIEKVKWIPSWGKN 442 (910)
T ss_pred ---HHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCEEEECCHHHHHCCC-----HHHHHHHHHHHHHCCEECHHHHH
T ss_conf ---8999999998779854342101367533266886267631003423471-----88999999999846741516787
Q ss_pred CHHHHHHCCCCCCCCCCCCCCCCEEEEECCCC-CEEECCCHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCC
Q ss_conf 20244304320000112345672258982588-47325211244421222118874335640111468878875545664
Q gi|254780445|r 483 RLRSMIENRPDWLLSRQRNWGVPICFFYNEKG-EILLDKAINDRIIKTFKDQGSDAWFSEGSRDFFLGDRASEPWIQSKD 561 (963)
Q Consensus 483 r~~~~i~~~~DW~ISRqR~WG~PIPi~~~e~~-~~~~~~~~~~~i~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~r~~D 561 (963)
T Consensus 443 r~~~~i~~r~DWcISRQR~WG~PIPv~~~~~~~~~~~~~~~~~~i~~~~~~~G~d~w~~~~~~~~l~~~~~~~~~~r~~D 522 (910)
T PRK05743 443 RIESMVENRPDWCISRQRTWGVPIPIFYHKETGELHRTPELIEHVAKLFEKEGIDAWFELDAKELLPEGYPADQYEKETD 522 (910)
T ss_pred HHHHHHHCCCCCEEECCCCCCCCEEEEEECCCCEECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCHHEEECCC
T ss_conf 99999707988625213566882259997899700476888999999887507641123999883789898310064475
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCCCHHCCCCCC
Q ss_conf 21000033354543322222333443100255444211124554443311784000013037826213453000012344
Q gi|254780445|r 562 ILDVWFDSACTHTILLGKDPKLAWPADVYLEGSDQHRGWFQHSLLESCATRGSTPFTSLITHGFSVDENGEKMSKSKGNV 641 (963)
Q Consensus 562 vlDvWfDSg~s~~~~~~~~~~~~~PaD~~~eG~Dq~RgWF~s~ll~~~~~~~~~Pfk~v~~hG~vld~~G~KMSKS~GNv 641 (963)
T Consensus 523 vlD~WFdSGss~~~~~~~~~~~~~PaDly~eG~Dq~RgWF~s~ll~s~~~~~~~Pfk~v~~hG~vlD~~G~KMSKS~GNv 602 (910)
T PRK05743 523 ILDVWFDSGSTHAAVLEDRERLGYPADLYLEGSDQHRGWFQSSLLTSVATNGKAPYKQVLTHGFTVDGKGRKMSKSLGNV 602 (910)
T ss_pred CCCCEECCCCCCHHHCCCCCCCCCCCCEEECCCCHHHEEHHHHHHHEEEECCCCCEEEEEECCEEECCCCCCCCCCCCCC
T ss_conf 53210027986311114662116843232337652210236622122452178884179861328989888888878777
Q ss_pred CCHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC--CCHHHHHHHHHHHHH
Q ss_conf 333664113675788788871787665544310256777640000011000001224444567--310111278887543
Q gi|254780445|r 642 VFPEEIISESGADVLRYWAVNSDYHDDQRLGKNIIQTNIDTYRKLRNTIRWMLGMLAHDTGNE--PSLADMPALEQLMLH 719 (963)
Q Consensus 642 i~p~~ii~~yGaD~lR~~~~~~~~~~d~~~~~~~l~~~~~~~~kl~Nt~rf~l~~l~~~~~~~--~~~~~l~~~DkwiLs 719 (963)
T Consensus 603 idP~~ii~~yGAD~lRlwvas~d~~~d~~~s~~il~~~~~~yrKi~Nt~rf~l~nl~~f~~~~~~~~~~~l~~lD~wiL~ 682 (910)
T PRK05743 603 IDPQDVIKKYGADILRLWVASTDYSGDVRISDEILKQVAESYRRIRNTLRFLLGNLNDFDPAKDAVPYEELVELDRWALH 682 (910)
T ss_pred CCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHH
T ss_conf 99899986549409999987257434545568999889999999999999998632168832245892446576899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf 68999999889876540122668899878630240010102012227899808999999999999999999970004489
Q gi|254780445|r 720 RLTELDQVVREAYDAFNFKEVVRQLTNFSNAELSSFYFDIRKDSLYCDSPSSLKRLSSIAVIRILCRHLIIWIAPILPFT 799 (963)
Q Consensus 720 kl~~~i~~v~~~~e~~~f~~a~~~i~~F~~~dLS~~Yld~~Kdrly~~~~~s~~R~s~~~~L~~il~~l~~lLaPi~P~~ 799 (963)
T Consensus 683 ~l~~~~~~v~~~~~~y~f~~a~~~l~~F~~~dls~~Y~~~~Kdrly~~~~~~~~R~s~q~~L~~vl~~l~~llaPi~Pf~ 762 (910)
T PRK05743 683 RLNELQEEIIEAYENYDFHKVYQALHNFCSVDLSSFYLDIIKDRLYTDKADSLARRSAQTALYHILEALVRWLAPILSFT 762 (910)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999986355889999999885756879998761244414789849999999999999999999998664699
Q ss_pred HHHHHHHCCCCCCCEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCHHH-HHH
Q ss_conf 9999986388677345335889983568989999999999999999999999997389997444038998296899-977
Q gi|254780445|r 800 AEEAWLSLNPEAVSVHLELFPIIPLEWQNACLSKKWGKILQLRKVVTSALEIERKAKHIGSSLETAPTLYITDSSL-ISN 878 (963)
Q Consensus 800 aEEiw~~l~~~~~SI~~~~wP~~~~~~~d~~le~~~~~l~~ir~~V~~~le~~R~~k~I~~slea~v~i~~~d~~~-l~~ 878 (963)
T Consensus 763 ~EEiw~~l~~~~~SV~l~~wp~~~-~~~~~~l~~~w~~l~~lR~~V~k~lE~~R~~k~IgsSLea~v~l~~~~~~~~~L~ 841 (910)
T PRK05743 763 AEEIWQYLPEREESVFLEEWPEGP-FWADEELLAKWDELRALRDEVNKALEEARNEKVIGSSLEAEVTLYADDELAALLA 841 (910)
T ss_pred HHHHHHHCCCCCCCEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEEEECHHHHHHHH
T ss_conf 999997388999976826799996-5569789999999999999999999999866988953503799981889999987
Q ss_pred HCCCCHHHHEEECEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 2211365511204169963777533201236786289998178852852175467447885635303788999632
Q gi|254780445|r 879 IEGENLAEICITSDITIVHSNGPTDAFRLSDVPNVSVQCLKAEGKKCARSWRVTKDVGLDASYPDVSARDAAVLHE 954 (963)
Q Consensus 879 l~~~~L~~~~ivS~v~i~~~~~~~~~~~~~~~~~~~v~v~~a~~~KC~RCW~~~~~v~~~~~~~~lC~RC~~vl~~ 954 (963)
T Consensus 842 ~~~~~L~~ifivS~v~l~~~~~-------~~~~~~~v~v~~a~g~KC~RCW~~~~~v~~~~~~~~lC~RC~~vl~g 910 (910)
T PRK05743 842 SLGDELRFLLIVSQVTVADLAA-------EEVEGLAVVVEKAEGEKCERCWHYREDVGSDAEHPTLCGRCVSVVAG 910 (910)
T ss_pred HHHHHHHHHHEECEEEEECCCC-------CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC
T ss_conf 7288999876524299962776-------77796389999799997713098976537788989768427876188