HHsearch alignment for GI: 254780445 and conserved domain: PRK06039
>PRK06039 ileS isoleucyl-tRNA synthetase; Reviewed.
Probab=100.00 E-value=0 Score=1870.95 Aligned_cols=837 Identities=28% Similarity=0.498 Sum_probs=746.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 98889968977999999986476144540568888489962822558897621577856687899876708982678888
Q gi|254780445|r 20 FPMRAKLPQKESELITYWQKIRLFDKIRESAVGRKNFTLHDGPPYANGHIHIGHALNKILKDVIVRSFQMRNFNACFVPG 99 (963)
Q Consensus 20 Fp~r~~~~~~E~~~~~~W~~~~~f~~~~~~~~~~~~f~l~dgPPy~nG~lH~GH~~n~~~kDi~~Ry~rm~G~~Vl~~~G 99 (963)
T Consensus 1 ~~~~~~~~~iE~~~~~~W~~~~~f~~~~~~~~~~~~f~~~dgPPy~nG~lHiGH~~~~tikDii~Ry~rm~G~~V~~~~G 80 (1042)
T PRK06039 1 VPSKPDFPAVEEEVLKFWKENDIFEKSIENREGGPEFVFYDGPPFANGLPHYGHLLTRTIKDVVPRYKTMKGYKVERRAG 80 (1042)
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf 98999988988999999986899246300069999789967899878872143668789999999998738996689897
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCH-HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEECCCHHHHHHHHHHHH
Q ss_conf 24442089999999876559983-34899999999999999999999999997060776369811577679899999999
Q gi|254780445|r 100 WDCHGLPIEWKVENEYLAKGKKK-DDIPVNEFRQACRDSASAWVKIQSKEFQRLGIVGDFENPYTTMTRESEAQIASELL 178 (963)
Q Consensus 100 wD~hGLPiE~~vek~l~~~~~~~-~~~~~~~~~~~c~~~a~~~i~~~~~~~~rlG~~~Dw~~~y~T~dp~y~~~~~~~F~ 178 (963)
T Consensus 81 wD~hGLPiE~~vek~lgi~~k~~i~~~gi~~F~~~cr~~~~~~~~~~~~~~~rlG~~~Dw~~~y~T~d~~y~e~v~~~F~ 160 (1042)
T PRK06039 81 WDTHGLPVELEVEKELGISGKKDIEKYGIEKFNEECRESVLRYTDEWEEYTERLGRWVDFDNPYKTMDNSYMESVWWALK 160 (1042)
T ss_pred CCCCCHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHH
T ss_conf 48677899999999847667642655289999999999999999999999998182052689827689889999999999
Q ss_pred HHHHCCCEECCCCEEEECCCCCCCCCCHHH--EEEEEECCEEEEEEEECCCCCCCCCCCCCHHCCHHHHHHHHHHHHCCC
Q ss_conf 999879611034302205743573650021--013210577999833037531122001100000057886544532277
Q gi|254780445|r 179 KIAESDQIYRGIKPIMWSIAEQTTLAEAEI--EYHDVDSDSILVGFPVKSSADYLIKSQIVIWTTTPWTIPGNRAIAFSS 256 (963)
Q Consensus 179 ~l~~kGliyr~~~pV~w~p~~~T~La~~Ev--ey~d~~~~s~~v~F~l~~~~~~~~~~~~~iwTTrP~Tl~~n~ai~v~p 256 (963)
T Consensus 161 ~L~ekGliYrg~~~V~wcp~~~T~Lad~Ev~~~Y~~~~~~s~~vkF~l~~~~----~~~l~iwTTrPwTl~~n~avaV~P 236 (1042)
T PRK06039 161 QLYDKGLLYEGYRVVPYCPRCETPLSNHEVRQGYKEVKDPSVYVKFKLKGEE----NEYLLAWTTTPWTLPSNLALAVGP 236 (1042)
T ss_pred HHHHCCCEEECCCEECCCCCCCCCCHHHHHHCCCEEEECCEEEEEEEEECCC----CCEEEEECCCCCCCCCCEEEEECC
T ss_conf 9998799896271325489889881186730574441446499999975279----847998658875111135999868
Q ss_pred CCCEEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHCCC-CEEEEEECCCCCCCCCEEEECCCCC---CCCEEEECCCC
Q ss_conf 6745899830665311112374355121118888876098-5178410011111285754313786---65125511443
Q gi|254780445|r 257 NHQYGLYDVISCSGQHTFDTGKKLIISKNLAQSIANQTNV-KIALVCDVKAEDLSKTMCSHPLKKL---GYTFSVPLIDA 332 (963)
Q Consensus 257 ~~~Y~~~~~~~~~~~~~~~~~~~~i~a~~~~~~~~~~~~~-~~~~~~~~~g~~l~g~~~~~Pl~~~---~~~~~~pi~~~ 332 (963)
T Consensus 237 d~~Y~~v~~--------~~~~e~~i~a~~~~~~~~~~~~~~~~~v~~~~~G~~L~G~~y~~p~~~~~~~~~~~~~~Vi~~ 308 (1042)
T PRK06039 237 DIDYVKVRD--------KGGGEVYILAEALLEKVLKKEGGEEYEVLETFKGEELEGLRYEPPFPYFVPEDEENAFRVVAA 308 (1042)
T ss_pred CCCEEEEEE--------CCCCEEEEEEHHHHHHHHHHCCCCCEEEEEEEECHHHCCCEEECCCCCCCCCCCCCCEEEEEC
T ss_conf 763699984--------489759998088899998551675407887751243078887788643236677874279954
Q ss_pred CCCCCCCCCCEEEEECCCCHHHHHHHHHCCCHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 22332244540564057898898998760521221002203430234455102431001786321135544456754523
Q gi|254780445|r 333 EYVANDCGTGFVHVAPSHGVEDFTAWNEAKDILLNRSVDIKVPSPVDGRGFYTTEAPGFSGARVLDDAGEKGNANEVVIA 412 (963)
Q Consensus 333 d~V~~~~GTG~Vh~aPahg~~Dy~~~~~~~~~~~~~~~~l~~~~~vd~~G~~~~~~~~~~G~~v~~~~~~~~~a~~~ii~ 412 (963)
T Consensus 309 d~V~~~~GTG~Vh~aPahg~~D~~---------~~~~~~l~~~~~vd~~G~~~~~~~~~~G~~v~d-------a~~~Ii~ 372 (1042)
T PRK06039 309 DFVTTEDGTGIVHIAPAFGEDDFE---------VGKKYGLPVVCPVDDNGRFTEEVPDYAGKFVKD-------ADKEIIR 372 (1042)
T ss_pred CCCCCCCCCCEEEECCCCCHHHHH---------HHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEC-------CHHHHHH
T ss_conf 720578897428967889889999---------999839986663177553346443517936530-------2099999
Q ss_pred HHHHCCCCCCHHHHCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCC-CCHHHHHHCC
Q ss_conf 566479821000000122113210132033331023663022455423689999875200000244434-3202443043
Q gi|254780445|r 413 ALINACAILNRSIVKHSYPHSWRSKKPIIFRTTSQWFLHMDKKLGDGSTLRSRALSEVEKIRFFPSSGK-NRLRSMIENR 491 (963)
Q Consensus 413 ~L~e~g~l~~~~~~~H~yP~cwR~~~pii~r~~~QWFi~~d~~~~~~~~~k~~~l~~i~~v~~~P~~~k-~r~~~~i~~~ 491 (963)
T Consensus 373 ~L~~~g~l~~~~~~~Hsyp~cwR~~~pli~~~~~QWFi~~~-------~~k~~~l~~~~~i~w~P~~~~~~rf~~wl~n~ 445 (1042)
T PRK06039 373 DLKERGLLFKAETYEHSYPHCWRCDTPLIYRAVESWFIRVT-------KIKDRMLELNQKINWYPEHIKDGRFGKWLENA 445 (1042)
T ss_pred HHHHCCCCCCCCCEECCCCCCCCCCCEEEEECCHHHHHHHH-------HHHHHHHHHHHCCEEECCCCCCCHHHHHHHHC
T ss_conf 99866752246633557874257798148633262776557-------67999999860214734523200699998636
Q ss_pred CCCCCCCCCCCCCCEEEEECCCCCEEECCCHHHHHHHHHHHCCCC--CCCCCCCHHC--CCCCCCCCCCCCCCCCCCCCC
Q ss_conf 200001123456722589825884732521124442122211887--4335640111--468878875545664210000
Q gi|254780445|r 492 PDWLLSRQRNWGVPICFFYNEKGEILLDKAINDRIIKTFKDQGSD--AWFSEGSRDF--FLGDRASEPWIQSKDILDVWF 567 (963)
Q Consensus 492 ~DW~ISRqR~WG~PIPi~~~e~~~~~~~~~~~~~i~~~~~~~g~d--~~~~~~~~~~--~~~~~~~~~~~r~~DvlDvWf 567 (963)
T Consensus 446 ~DW~ISRQR~WG~PIPvw~~~~~~~~~v~~s~~el~~---~~~~~~~~dlhrp~iD~v~~~~~~~~~~~~r~~DvlD~Wf 522 (1042)
T PRK06039 446 RDWAISRNRYWGTPLPIWRCEDCGRIDVIGSIEELEE---DFGVPKPIDLHRPYIDEVTLPCPDCGTGMRRVPDVLDVWF 522 (1042)
T ss_pred CCHHHHCCCCCCCCCEEEEECCCCCEEECCCHHHHHH---HCCCCCCCHHCCCCCCCEEECCCCCCCCCCCCCCCEEEEE
T ss_conf 3311000234577540699679996670286999987---6088883010245455056558998621030564212376
Q ss_pred CCCCCCCCCCC------CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCEECCCCCCHHCCCCCC
Q ss_conf 33354543322------222333443100255444211124554443311784000013037826213453000012344
Q gi|254780445|r 568 DSACTHTILLG------KDPKLAWPADVYLEGSDQHRGWFQHSLLESCATRGSTPFTSLITHGFSVDENGEKMSKSKGNV 641 (963)
Q Consensus 568 DSg~s~~~~~~------~~~~~~~PaD~~~eG~Dq~RgWF~s~ll~~~~~~~~~Pfk~v~~hG~vld~~G~KMSKS~GNv 641 (963)
T Consensus 523 dSg~~p~a~~~~p~~~~~~f~~~~PaD~i~eg~Dq~RgWF~sl~~~s~~~~~~~Pfk~v~~~G~Vld~~G~KMSKS~GNv 602 (1042)
T PRK06039 523 DSGSMPYAQLHYPFENKELFEEHFPADFIVEGIDQTRGWFYTLLALSTALFDRPPYKNVIVHGHVLDEDGQKMSKSLGNY 602 (1042)
T ss_pred ECCCCCEEEECCCCCCHHHHHCCCCCEEEEECCCHHEEEEEEEEEEEEEECCCCCCCEEEEEEEEECCCCEECCCCCCCC
T ss_conf 35874406977864366666215864444523222101436000321223484200258995038736864803367886
Q ss_pred CCHHHHHCCCCHHHHHHHHHH-CCCCCCCCCCCHHH-HHHHHHHHHHCCCCCCCC--CCCCCCCCCC--CCHHHHHHHHH
Q ss_conf 333664113675788788871-78766554431025-677764000001100000--1224444567--31011127888
Q gi|254780445|r 642 VFPEEIISESGADVLRYWAVN-SDYHDDQRLGKNII-QTNIDTYRKLRNTIRWML--GMLAHDTGNE--PSLADMPALEQ 715 (963)
Q Consensus 642 i~p~~ii~~yGaD~lR~~~~~-~~~~~d~~~~~~~l-~~~~~~~~kl~Nt~rf~l--~~l~~~~~~~--~~~~~l~~~Dk 715 (963)
T Consensus 603 idP~~vi~~yGADalRl~l~~~~~~~~d~~f~~~~v~e~~r~~~~~lwN~~rF~~~y~~ld~f~~~~~~~~~~~~~~~Dr 682 (1042)
T PRK06039 603 VDPFEVFDKYGADALRWYLLSSSVPWEDLRFSEDGIREVVRKFLLPLWNVYSFFALYANLDGFDPNEAEEALDSRNELDR 682 (1042)
T ss_pred CCHHHHHHHCCCHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
T ss_conf 89799988608279999999667755561577999999999999999999999987421027995435556321668789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCH
Q ss_conf 75436899999988987654012266889987863024001010201222789980899999999999999999997000
Q gi|254780445|r 716 LMLHRLTELDQVVREAYDAFNFKEVVRQLTNFSNAELSSFYFDIRKDSLYCDSPSSLKRLSSIAVIRILCRHLIIWIAPI 795 (963)
Q Consensus 716 wiLskl~~~i~~v~~~~e~~~f~~a~~~i~~F~~~dLS~~Yld~~Kdrly~~~~~s~~R~s~~~~L~~il~~l~~lLaPi 795 (963)
T Consensus 683 Wils~l~~~i~~v~~~~~~y~~~~a~~~l~~Fi-~dLs~wYi~~~r~R~~~~~-~~~~k~~A~~tL~~vL~~l~~llAP~ 760 (1042)
T PRK06039 683 WILSRLNSLVKEVTEALDNYDITKAARAIRDFV-DDLSNWYIRRSRRRFWKEE-DDPDKLAAYNTLYTVLETLSRLMAPF 760 (1042)
T ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH-HHHHHHHHHHHHHHHHCCC-CCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 999999999999999997245999999999999-8877999999778760368-97899999999999999999996501
Q ss_pred HHHHHHHHHHHCCCC--CCCEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCH
Q ss_conf 448999999863886--773453358899835689899999999999999999999999973899974440389982968
Q gi|254780445|r 796 LPFTAEEAWLSLNPE--AVSVHLELFPIIPLEWQNACLSKKWGKILQLRKVVTSALEIERKAKHIGSSLETAPTLYITDS 873 (963)
Q Consensus 796 ~P~~aEEiw~~l~~~--~~SI~~~~wP~~~~~~~d~~le~~~~~l~~ir~~V~~~le~~R~~k~I~~slea~v~i~~~d~ 873 (963)
T Consensus 761 ~PFitEeiyq~L~~~~~~eSVHl~~~P~~~~~~id~~le~~m~~~r~iv~~~r~~R~~--~~ikvRqPL~-~~~i~~~~~ 837 (1042)
T PRK06039 761 TPFIAEEIYQNLKGETGPESVHLADWPEVDESLIDPELEAAMDLVREIVSLGRSARKK--ANIKVRQPLS-RITVAVKDE 837 (1042)
T ss_pred HHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHH--CCCCCCCCCC-EEEEEECCH
T ss_conf 3676999998445589995179814677661214899999999999999999999987--5997666266-479994898
Q ss_pred HHHHHHC--CCCHHHHEEECEEEEECCC
Q ss_conf 9997722--1136551120416996377
Q gi|254780445|r 874 SLISNIE--GENLAEICITSDITIVHSN 899 (963)
Q Consensus 874 ~~l~~l~--~~~L~~~~ivS~v~i~~~~ 899 (963)
T Consensus 838 ~~~~~~~~~~~~I~~ElNVk~v~~~~~~ 865 (1042)
T PRK06039 838 EVLEALEEYEDIIKDELNVKEVEFVDDE 865 (1042)
T ss_pred HHHHHHHHHHHHHHHHHCEEEEEEECCC
T ss_conf 9999999999999985283389997076