HHsearch alignment for GI: 254780445 and conserved domain: pfam00750
>pfam00750 tRNA-synt_1d tRNA synthetases class I (R). Other tRNA synthetase sub-families are too dissimilar to be included. This family includes only arginyl tRNA synthetase.
Probab=98.36 E-value=4.4e-07 Score=67.19 Aligned_cols=132 Identities=13% Similarity=0.144 Sum_probs=79.6
Q ss_pred CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH--HHHHHCC-C----------
Q ss_conf 84899628225588976215778566878998767089826788882444208999999--9876559-9----------
Q gi|254780445|r 54 KNFTLHDGPPYANGHIHIGHALNKILKDVIVRSFQMRNFNACFVPGWDCHGLPIEWKVE--NEYLAKG-K---------- 120 (963)
Q Consensus 54 ~~f~l~dgPPy~nG~lH~GH~~n~~~kDi~~Ry~rm~G~~Vl~~~GwD~hGLPiE~~ve--k~l~~~~-~---------- 120 (963)
T Consensus 19 kkI~vE~~S~Np~kplHvGHlR~aiiGdslarll~~~G~~V~r~~yvnD~G~Qi~~l~~~~~~~~~~~~~~~~~~~~l~~ 98 (345)
T pfam00750 19 KKVVVEFSSPNPAKPIHVGHLRSTIIGDALSRLLEFLGYDVVRENYVGDWGTQFGMLIASLEAAAKEELTVPMPIQDLED 98 (345)
T ss_pred CEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
T ss_conf 88999853899998850410152799999999999879959899876864899999999999856665455665056666
Q ss_pred -----CH------------------HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCEECCCHHHHHHHHHHH
Q ss_conf -----83------------------3489999999999999999999999999706077636981157767989999999
Q gi|254780445|r 121 -----KK------------------DDIPVNEFRQACRDSASAWVKIQSKEFQRLGIVGDFENPYTTMTRESEAQIASEL 177 (963)
Q Consensus 121 -----~~------------------~~~~~~~~~~~c~~~a~~~i~~~~~~~~rlG~~~Dw~~~y~T~dp~y~~~~~~~F 177 (963)
T Consensus 99 ~Y~~~~~~~~~~~~~~~~~~~~~~~le~~d~~~~~~~---~~~~~~~~~~~l~~l~v~fD~~--~~Ese~~~~~~v~~vl 173 (345)
T pfam00750 99 GYRGIKKDYIAEEIFAKEARNAVVLLQSGDEEFREMW---VLLIFDHIKQSLNKIYDDFDVT--LHEGESVYKGRMNDAV 173 (345)
T ss_pred HCCHHHHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHH---HHHHHHHHHHHHHHHCCHHCCC--CCHHHHHHCCHHHHHH
T ss_conf 4215668888689999858998745001479999999---9999999999999964053767--1067888445099999
Q ss_pred HHHHHCCCEECCC
Q ss_conf 9999879611034
Q gi|254780445|r 178 LKIAESDQIYRGI 190 (963)
Q Consensus 178 ~~l~~kGliyr~~ 190 (963)
T Consensus 174 ~~L~~~g~~~e~d 186 (345)
T pfam00750 174 KDLKDNGLVYEND 186 (345)
T ss_pred HHHHHCCCEEEEC
T ss_conf 9998779889748