HHsearch alignment for GI: 254780445 and conserved domain: pfam01921
>pfam01921 tRNA-synt_1f tRNA synthetases class I (K). This family includes only lysyl tRNA synthetases from prokaryotes.
Probab=98.66 E-value=4.2e-08 Score=74.26 Aligned_cols=105 Identities=18% Similarity=0.190 Sum_probs=71.9
Q ss_pred HCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC--------CCHHHHHHHHHHHHCC
Q ss_conf 05688884899628225588976215778566878998767089826788882444--------2089999999876559
Q gi|254780445|r 48 ESAVGRKNFTLHDGPPYANGHIHIGHALNKILKDVIVRSFQMRNFNACFVPGWDCH--------GLPIEWKVENEYLAKG 119 (963)
Q Consensus 48 ~~~~~~~~f~l~dgPPy~nG~lH~GH~~n~~~kDi~~Ry~rm~G~~Vl~~~GwD~h--------GLPiE~~vek~l~~~~ 119 (963)
T Consensus 13 ~~~~~~~~~v~~tG-~~PSG~~HIGnfrEv~~~~~V~~al~~~g~~~~~i~~~DD~D~lRKVP~nlp~~e~~~~ylg~Pl 91 (355)
T pfam01921 13 KERFKKGEILVETG-IGPSGLPHIGNFREVLRTDAVRRALRKRGFETRLIYFSDDMDGLRKVPDNVPNSEMLEKYLGKPL 91 (355)
T ss_pred HHCCCCCCEEEECC-CCCCCCCEEECCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCC
T ss_conf 96067985899526-68998864215601799999999999749876999982156510137889999899987369752
Q ss_pred CCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEC
Q ss_conf 983348999999999999999999999999970607763
Q gi|254780445|r 120 KKKDDIPVNEFRQACRDSASAWVKIQSKEFQRLGIVGDF 158 (963)
Q Consensus 120 ~~~~~~~~~~~~~~c~~~a~~~i~~~~~~~~rlG~~~Dw 158 (963)
T Consensus 92 ---~~I-PdP~-g~~~Sya~h~~~~~~~~L~~~gi~~ef 125 (355)
T pfam01921 92 ---TRI-PDPF-GCHESYAEHFNAPFLEFLDRFGIEYEF 125 (355)
T ss_pred ---EEC-CCCC-CCCCCHHHHHHHHHHHHHHHCCCEEEE
T ss_conf ---134-7988-874559999999999999983982899