HHsearch alignment for GI: 254780445 and conserved domain: pfam01921

>pfam01921 tRNA-synt_1f tRNA synthetases class I (K). This family includes only lysyl tRNA synthetases from prokaryotes.

Probab=97.71  E-value=0.00033  Score=47.27  Aligned_cols=99  Identities=25%  Similarity=0.303  Sum_probs=66.1

Q ss_pred             CCCCCCCCCCCCC--HHHHHHHHHH-HHCCCCCEEEEECCCCCEECCCCCCHHCCCCCCCCHHHHHCCCCHHHHHHHHHH
Q ss_conf             4310025544421--1124554443-311784000013037826213453000012344333664113675788788871
Q gi|254780445|r  586 PADVYLEGSDQHR--GWFQHSLLES-CATRGSTPFTSLITHGFSVDENGEKMSKSKGNVVFPEEIISESGADVLRYWAVN  662 (963)
Q Consensus       586 PaD~~~eG~Dq~R--gWF~s~ll~~-~~~~~~~Pfk~v~~hG~vld~~G~KMSKS~GNvi~p~~ii~~yGaD~lR~~~~~  662 (963)
T Consensus       230 gVdfEp~GKDh~~~GGS~~~~~~I~~~i~g~~pP~--~~~YE~~~~kgg~KmSsSkGn~is~~e~L~~~~pE~Lr~l~~~  307 (355)
T pfam01921       230 GVDFEPFGKDHAAPGGSYDTSSRIAREILGGEPPE--PFPYELILLKGGGKMSSSKGNGITIEEWLEYAPPESLRFLMFR  307 (355)
T ss_pred             CCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCC--CCCEEEEEECCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHCC
T ss_conf             63486257432467876222899999970999999--8865789966997104688987699999986699999999804


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             787665544310256777640000
Q gi|254780445|r  663 SDYHDDQRLGKNIIQTNIDTYRKL  686 (963)
Q Consensus       663 ~~~~~d~~~~~~~l~~~~~~~~kl  686 (963)
T Consensus       308 ~~P~~a~~l~fd~ip~~~Deyd~~  331 (355)
T pfam01921       308 VKPKKAKRLDFDVIPKLVDEYDRL  331 (355)
T ss_pred             CCCCCCEEECCCHHHHHHHHHHHH
T ss_conf             288845120730446689999999