>gnl|CDD|161856 TIGR00395, leuS_arch, leucyl-tRNA synthetase, archaeal and cytosolic family. The leucyl-tRNA synthetases belong to two families so broadly different that they are represented by separate models. This model includes both archaeal and cytosolic eukaryotic leucyl-tRNA synthetases; the eubacterial and mitochondrial forms differ so substantially that some other tRNA ligases score higher by this model than does any eubacterial LeuS. Length = 938

Score = 134 bits (339), Expect = 1e-31 Identities = 224/1026 (21%), Positives = 361/1026 (35%), Gaps = 205/1026 (19%) Query: 37 WQKIRLFDKIRESAVG-RKNFTLHDGPPYANGHIHIGHALNKILKDVIVRSFQMRNFNAC 95 WQK I E+ R+ F L PY NG +H GH + +V R +M+ N Sbjct: 7 WQKRWEEAHIFEADPDDREKFFLTMAYPYLNGVMHAGHCRTFTIPEVSARFERMKGKNVL 66 Query: 96 FVPGWDCHGLPI-----------EWKVENEYLAKGKKKDDIPVNEFRQACRDSASAWVKI 144 F G+ G PI E ++N + IP E + V+ Sbjct: 67 FPLGFHVTGTPILGLAELIKRRDELTIKNY-----TEVHAIPREELLKFT--DPEYIVEY 119 Query: 145 QSKE----FQRLGIVGDFENPYTTMTRESEAQIASELLKIAESDQIYRGIKPIMWSIAEQ 200 S+E + +G D+ + T + I ++ K+ E I +G P+ + + Sbjct: 120 FSREAESACKSMGYSIDWRRSFKTTDPYYDRFIEWQMNKLKELGLIVKGEHPVRYCPKDG 179 Query: 201 TTLAEAEIEYHDVDS-------DSILVGFPVKSSADYLIKSQIVIWTTTPWTIPGNRAIA 253 +E HD+ S + IL+ F ++ A Y V T P T+ G Sbjct: 180 NP-----VEDHDLLSGEGVTIVEYILIKFELEDGAFYF-----VAATLRPETVYGVTNCW 229 Query: 254 FSSNHQYGLYDVISCSGQHTFDTGKKLIISKNLAQSIANQTNVKIALVCDVKAEDLSKTM 313 + Y + +V G+K I SK ++++ Q +K + +V + Sbjct: 230 VNPTITYVIAEV----------GGEKWITSKEAFENLSYQ-KLKYKPIEEVPGKQFIGKK 278 Query: 314 CSHPLKKLGYTFSVPLIDAEYVANDCGTGFVHVAPSHGVEDFTAWNEAK---DILLNRSV 370 +P+ VP++ AE+V GTG V P+H +D+ A + + L + V Sbjct: 279 VHNPVVGP----EVPILPAEFVDTTKGTGVVMSVPAHAPDDYIALEDLLHDPEYLGIKPV 334 Query: 371 --DIKVPSP---VDGRGFYTTEA-----------------------------PGFSGARV 396 DI+ P P DG G + G + Sbjct: 335 VIDIE-PVPLIHTDGYGDLPAKEIVEEKGIKSQKDKNLLEEATKILYKEEYHTGVMIYNI 393 Query: 397 LDDAGEK-GNANEVVIAALINACAILNRSIVKHSYPHSWRSKKPIIFRTTS--------- 446 G K A E V A LI+A + V + + S+ P+I R + Sbjct: 394 PPYKGMKVSEAKEKVKADLIDA----GLADVMYEF-----SESPVICRCGTDCIVKVVED 444 Query: 447 QWFLHMDKKLGDGSTLRSRALSEVEKIRFFPSSGKNRLRSMIENRPDWLLSRQRNWGVPI 506 QWF+ K D S + A +E +R P KN I+ DW R+ G + Sbjct: 445 QWFV----KYSDES-WKELAHECLEGMRIIPEEVKNAFEGKIDWLKDWACCRRYGLGTRL 499 Query: 507 CFFYNEKGEILLD-----------KAINDRIIKTFKDQGSDAWFSEGSRDF-FLGDRASE 554 + E L D +N +Q +D +F D+ FLG + Sbjct: 500 PWDEKWLIESLSDSTIYMAYYTIAHYLNKDYYGN--EQMTDEFF-----DYIFLGKGDVK 552 Query: 555 PWIQSKDILDVWFDSACTHTILLGKDPKLAWPADVYLEGSD---QHRGW--FQHSLL--E 607 + L ++ + +P D + G D H + F H + E Sbjct: 553 NTNIPLPAIQK-----------LRREFEYWYPLDWRISGKDLIPNHLTFYIFHHVAIFPE 601 Query: 608 SCATRGSTPFTSLITHGFSVDENGEKMSKSKGNVVFPEEIISESGADVLR-YWAVNSDYH 666 RG ++ G+KMSKSKGNV+ E+ + + GADV R Y A ++ Sbjct: 602 KFWPRGIVVNGYVML-------EGKKMSKSKGNVLTLEQAVEKFGADVARLYIADAAETV 654 Query: 667 DDQRLGKNIIQTNIDTYRKLRNTIRWMLGMLAHDTGNEPSLADMPALEQLMLHRLTELDQ 726 D ++ ++ I +L + +TG E S D + + R+ + Sbjct: 655 QDADWKESEVEGTILRLERLYEFAEEITKESNLETGEETSFID-----RWLESRMNAAIK 709 Query: 727 VVREAYDAFNFKEVVRQLTNFSNAELSSFYFDIRKDSLYCDSPSSLKRLSSIAVIRILCR 786 EA + F ++ V+ FD++ D + +R + +L R Sbjct: 710 ETYEAMENFQTRKAVKYA-----------LFDLQADVDW------YRRRGGVNHKDVLAR 752 Query: 787 HLIIWI---APILPFTAEEAWLSLNPEAVSVHLELFPIIPLEWQNACLSKKWGKILQ-LR 842 +L WI AP P AEE W + E V L FP E + K+ + LR Sbjct: 753 YLETWIKLLAPFAPHFAEEMWEEVGNEG-FVSLAKFP----EASEPAVDKEVEAAEEYLR 807 Query: 843 KVVTSALEIERKAKHIGSSLETAPTLYITD--SSLISNIEGENLAEICITSDITIVHSNG 900 +V EI I +S LY ++ S I E E D+ V Sbjct: 808 NLVRDIQEI----AKIDASKPKRVYLYTSEDWKSQCLKIVAELFGED-TGEDMKKVMEE- 861 Query: 901 PTDAFRLSDVPNVSVQCLKAEGKKCA---RSWRVTKDVGLDASYPDVSARDAAVLHELGY 957 P + R +V ++ Q +K E K+ V K +V A + Sbjct: 862 PEERKRGKEVISLVKQIIKDEKKEDELQISEIEVLKA-AARFIKKEVGALVIIEFSADSF 920 Query: 958 PKNSNV 963 P+N Sbjct: 921 PENKKR 926

RPSBLAST alignment for GI: 254780445 and conserved domain: TIGR00395