BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780449|ref|YP_003064862.1| hypothetical protein
CLIBASIA_01670 [Candidatus Liberibacter asiaticus str. psy62]
         (459 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|254780449|ref|YP_003064862.1| hypothetical protein CLIBASIA_01670 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040126|gb|ACT56922.1| hypothetical protein CLIBASIA_01670 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 459

 Score =  932 bits (2408), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 459/459 (100%), Positives = 459/459 (100%)

Query: 1   MNISEINKYFPPNNNIERKEIADKLIKNISIVDKTMDVLPLYHQVRELTQNKASTEQVID 60
           MNISEINKYFPPNNNIERKEIADKLIKNISIVDKTMDVLPLYHQVRELTQNKASTEQVID
Sbjct: 1   MNISEINKYFPPNNNIERKEIADKLIKNISIVDKTMDVLPLYHQVRELTQNKASTEQVID 60

Query: 61  ISTKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLV 120
           ISTKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLV
Sbjct: 61  ISTKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLV 120

Query: 121 RGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEGITSIRTIEGSSVTIKSESI 180
           RGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEGITSIRTIEGSSVTIKSESI
Sbjct: 121 RGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEGITSIRTIEGSSVTIKSESI 180

Query: 181 GTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKAL 240
           GTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKAL
Sbjct: 181 GTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKAL 240

Query: 241 TKADPALESIYQRGKIFSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSEFKM 300
           TKADPALESIYQRGKIFSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSEFKM
Sbjct: 241 TKADPALESIYQRGKIFSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSEFKM 300

Query: 301 VPLSDQTLFRDFQGLCGKNIDNQFILDLNRASFIFNGKKLARDNSAEAIQKLMNQFAKNP 360
           VPLSDQTLFRDFQGLCGKNIDNQFILDLNRASFIFNGKKLARDNSAEAIQKLMNQFAKNP
Sbjct: 301 VPLSDQTLFRDFQGLCGKNIDNQFILDLNRASFIFNGKKLARDNSAEAIQKLMNQFAKNP 360

Query: 361 KQLQLISSYANQSIFADSVVHLMQSIPEFAKYASKSGSASKFTAKTLTNGEVAFTAKYTT 420
           KQLQLISSYANQSIFADSVVHLMQSIPEFAKYASKSGSASKFTAKTLTNGEVAFTAKYTT
Sbjct: 361 KQLQLISSYANQSIFADSVVHLMQSIPEFAKYASKSGSASKFTAKTLTNGEVAFTAKYTT 420

Query: 421 KVQAVDKIAGKPLKEYGLKISGILSPDKATELQRSFYLK 459
           KVQAVDKIAGKPLKEYGLKISGILSPDKATELQRSFYLK
Sbjct: 421 KVQAVDKIAGKPLKEYGLKISGILSPDKATELQRSFYLK 459


>gi|315122103|ref|YP_004062592.1| hypothetical protein CKC_01765 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495505|gb|ADR52104.1| hypothetical protein CKC_01765 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 464

 Score =  247 bits (630), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 163/418 (38%), Positives = 241/418 (57%), Gaps = 30/418 (7%)

Query: 62  STKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVR 121
           S+K+ + A +  +S+IPIYGT + FKKG  GWGI GAI+D   L+PVVGYGA+    L R
Sbjct: 53  SSKIGETAKEALLSLIPIYGTIQSFKKGEIGWGIFGAITDVLTLVPVVGYGAKMVGALAR 112

Query: 122 GGSIALKAGTAGTMIAAKEACTIAQATEKTAKL------TALTKEGITSIR----TIEGS 171
           GG+ A+K   AG + A+  A T A AT   A L      T    EG ++      T++ +
Sbjct: 113 GGNAAIKISKAGAIAASATASTYAAATRGGAALADGALITKYAMEGESAFNAGSATVKAT 172

Query: 172 SVTIKSESIGTKASISSTNTAEKSAISQKITTNS------TTEIGK-TTEVVEESISKI- 223
           S T+   ++ TKA+ S+ +T +K+AI   I+ N+      T E+ K   +VVE+S  K  
Sbjct: 173 SSTLYESNVITKAAESTHSTLDKAAI-LPISKNTIKTSVNTAEMDKIAAKVVEQSTKKTT 231

Query: 224 --NSQLSKSTPQGIWTKALTKADPALESIYQRGKIFSNTIKNNAFIEKLAHTTKAIDKKI 281
             N +  K   +  +  +L   DP LE +YQ GK  +   K+ +  EK+  T+ ++ K  
Sbjct: 232 LSNKKTIKQASKKFFIASLRAVDPGLELLYQGGK--AAIRKSRSIPEKIMKTSHSLPK-- 287

Query: 282 PFIGNQWRDINTAHSEFKMVPLSDQTLFRDFQGLCGKNIDNQFILDLNRASFIFNGKKLA 341
               N W++I++  SE+KMV LSD++LFR+F+ L    +D QF+LDLNRA +I NGK + 
Sbjct: 288 ----NTWKNIDSIPSEYKMVSLSDESLFRNFKQLNKNELDQQFLLDLNRAEYIINGKNMR 343

Query: 342 RDNSAEAIQKLMNQFAKNPKQLQLISSYANQSIFADSVVHLMQSIPEFAKYASKSGSASK 401
             N    +  L   FA +P++LQ+IS+YA+Q IFAD + +LM++IP    Y SK+G  + 
Sbjct: 344 DTNQKSQLAYLQKTFANDPQKLQIISAYAHQGIFADGISYLMETIPNMLSYGSKNGKTT- 402

Query: 402 FTAKTLTNGEVAFTAKYTTKVQAVDKIAGKPLKEYGLKISGILSPDKATELQRSFYLK 459
           F   TL    V  +AKYT  +   ++    PL+EYGLKI  IL P+KA +  + FY K
Sbjct: 403 FQINTLGEEGVRLSAKYTASLVTENQAIKNPLREYGLKIDTILFPNKAPQFTQYFYTK 460


>gi|254780448|ref|YP_003064861.1| hypothetical protein CLIBASIA_01665 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040125|gb|ACT56921.1| hypothetical protein CLIBASIA_01665 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 311

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 118/384 (30%), Positives = 179/384 (46%), Gaps = 75/384 (19%)

Query: 76  MIPIYGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGGSIALKAGTAGTM 135
           MIP+YGT +EFKKGNYGWG +G +SD ALL     Y  +    LVRG SIA K  T G  
Sbjct: 1   MIPVYGTIQEFKKGNYGWGALGIVSDVALLAIPAAYLGKVLFGLVRGSSIATKIATTGIA 60

Query: 136 IAAKEACTIAQATEKTAKLTALTKEGITSIRTIEGSSVTIKSESIGTKASISSTNTAEKS 195
              +EA  + + T++ A    L KEGI +   +EG S  IKSES+G K  IS++  ++  
Sbjct: 61  TVVQEATVMTKTTQEGA---LLAKEGIEATHIMEGGSTAIKSESVGAKELISASQNSQ-- 115

Query: 196 AISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADPALESIYQRGK 255
                    + T+ G  ++                      TKA                
Sbjct: 116 ---------TVTQTGNISDA---------------------TKA---------------- 129

Query: 256 IFSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSEFKMVPLSDQTLFRDFQGL 315
             S+TIK+   I++    ++AI +K+P              E+  +       FRDF+ L
Sbjct: 130 --SSTIKDAQSIDR----SQAIFQKMPL------------EEYPRLQKIGINYFRDFK-L 170

Query: 316 CGKNIDNQFILDLNRAS-FIFNGKKLARDNSAEAIQKLMNQFAKNPKQLQLISSYANQSI 374
            G N   + +LD +RA+ FI +GKK+  D++   + +L   F K+ +++QLISSYA++ I
Sbjct: 171 LGTNKVYKNLLDASRATEFIIDGKKINIDSAQNMLAELNKIFPKDFEKVQLISSYAHEHI 230

Query: 375 FADSVVHLMQSIPEFAKYASKSGSASKFTAKTLTNGEVAFTAKYTTKVQAVDKIAGKPLK 434
           F       + ++     Y   S     +   TL +  ++F AK    V  ++   G   +
Sbjct: 231 FCKPFTKDLLNLANKNIY-QLSNPRYSYQFNTLKDKTISFVAKEEGLVTYLN---GSLHR 286

Query: 435 EYGLKISGILSPDKATELQRSFYL 458
            YG+K  GILS +   EL  S Y+
Sbjct: 287 NYGIKAEGILSRNAPPELHFSSYV 310


>gi|315122104|ref|YP_004062593.1| hypothetical protein CKC_01770 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495506|gb|ADR52105.1| hypothetical protein CKC_01770 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 335

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 75/148 (50%), Gaps = 9/148 (6%)

Query: 309 FRDFQGLCGKNIDNQFILDLNRAS-FIFNGKKLARDNSAEAIQKLMNQFAKNPKQLQLIS 367
           F DF+ L   N   + + D ++AS FI NGKK+  D   + ++ L   F  + +++QLIS
Sbjct: 181 FYDFK-LLSPNKAYKGLRDASKASEFIVNGKKINIDTPEKMLENLKEIFPNDFEKVQLIS 239

Query: 368 SYANQSIFADSVVHLMQSIPEFAKYAS-KSGSASKFTAKTLTNGEVAFTAKYTTKVQAVD 426
            YA++ IF     H + SI     Y   K+ ++ KF A  L +G + F+A Y      VD
Sbjct: 240 CYAHEGIFDAPFTHKLFSINNPKNYTGVKTYNSYKFDA--LEDGTINFSATYKGNFSPVD 297

Query: 427 KIAGKPLKE-YGLKISGILSPDKATELQ 453
              G P    YG+K+ GILS     EL 
Sbjct: 298 ---GSPSTHGYGVKVDGILSKQSIPELH 322



 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 2/61 (3%)

Query: 61  ISTKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLV 120
           IST ++ +A    ++ IPIYGT + FK+   GWGI+G  +D   LI  +GYG + A  L+
Sbjct: 41  IST-LESIAKKSLIAAIPIYGTIQAFKEKESGWGILGITTDVLTLIG-IGYGIKGAAALI 98

Query: 121 R 121
           R
Sbjct: 99  R 99


>gi|320538773|ref|ZP_08038451.1| hypothetical protein SSYM_0353 [Serratia symbiotica str. Tucson]
 gi|320031162|gb|EFW13163.1| hypothetical protein SSYM_0353 [Serratia symbiotica str. Tucson]
          Length = 210

 Score = 60.1 bits (144), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 17/166 (10%)

Query: 301 VPLSD--QTLFRDFQGL-CGKNIDNQFILDLNRASFIFNGKKLARDNSAEAIQKLMNQFA 357
           VP+ D    L  DF  +     +  QF+LD +RA++  +GK + R +          QF 
Sbjct: 53  VPVLDTISILQDDFHKIKVTTQLSEQFLLDFDRATYKVDGKVIPRGDYI--------QFE 104

Query: 358 K---NPKQLQLISSYANQSIFADSVVHLMQSIPE-FAKYASKSGSASKFTAKTLTNGEVA 413
           K   + K+ QLISSYANQ   AD  +  M   P+ FAK+ + + + S +    + + ++ 
Sbjct: 105 KAIPDIKKRQLISSYANQMSLADPSIGAMSFFPDSFAKHGAHNSNVS-YEIWNIPDSKIK 163

Query: 414 FTAKYTTKVQAVDKIAG-KPLKEYGLKISGILSPDKATELQRSFYL 458
             AK  +K+  VD   G K    YGLK    LS +   +   S+YL
Sbjct: 164 LIAKVESKLTPVDLADGEKIYSSYGLKAEMTLSENTPPKYNYSYYL 209


>gi|15617174|ref|NP_240387.1| hypothetical protein BU584 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|11387313|sp|P57644|Y584_BUCAI RecName: Full=Uncharacterized protein BU584; AltName: Full=yba3
 gi|25373122|pir||A84998 hypothetical protein [imported] - Buchnera sp. (strain APS)
 gi|10039239|dbj|BAB13273.1| hypothetical protein [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
          Length = 367

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 2/144 (1%)

Query: 316 CGKNIDNQFILDLNRASFIFNGKKLARDNSAEAIQKLMNQFAKNPKQLQLISSYANQSIF 375
              ++DN F+ D N   F+ N   ++ +N  + + K       N +  QLIS+YANQ   
Sbjct: 226 SSNDLDNDFMNDTNPFLFVVNNALISVNNRNKML-KDFKTIVPNVEFRQLISTYANQKFL 284

Query: 376 ADSVVHLMQSIPEFAKYASKSGSASKFTAKTLTNGEVAFTAKYTTKVQAVDKIAGKPLKE 435
             S + L+   PE  +Y  K  S + +    L +G V   A   + +   +    +  K 
Sbjct: 285 RQSYLQLISEHPEIDQYQIK-HSRNIYKINFLDDGSVKLVATNLSDLDVKNDNYIQKYKS 343

Query: 436 YGLKISGILSPDKATELQRSFYLK 459
           +G++ + IL P+ +  ++ S+++K
Sbjct: 344 FGIRATIILPPNASPIMKYSYFMK 367


>gi|219681925|ref|YP_002468311.1| hypothetical protein BUAP5A_577 [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|219624768|gb|ACL30923.1| hypothetical protein BUAP5A_577 [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
          Length = 367

 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 2/144 (1%)

Query: 316 CGKNIDNQFILDLNRASFIFNGKKLARDNSAEAIQKLMNQFAKNPKQLQLISSYANQSIF 375
              ++DN F+ D N   F+ N   ++ +N  + + K       N +  QLIS+YANQ   
Sbjct: 226 SSNDLDNDFMNDTNPFLFVVNNGLISVNNRNKML-KDFKTIVPNVEFRQLISTYANQKFL 284

Query: 376 ADSVVHLMQSIPEFAKYASKSGSASKFTAKTLTNGEVAFTAKYTTKVQAVDKIAGKPLKE 435
             S + L+   PE  +Y  K  S + +    L +G V   A   + +   +    +  K 
Sbjct: 285 RQSYLQLISEHPEIDQYQIK-HSRNIYKINFLDDGSVKLVATNLSDLDVKNDNYIQKYKS 343

Query: 436 YGLKISGILSPDKATELQRSFYLK 459
           +G++ + IL P+ +  ++ S+++K
Sbjct: 344 FGIRATIILPPNASPIMKYSYFMK 367


>gi|219682480|ref|YP_002468864.1| hypothetical protein BUAPTUC7_578 [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219622213|gb|ACL30369.1| hypothetical protein BUAPTUC7_578 [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
          Length = 367

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 2/144 (1%)

Query: 316 CGKNIDNQFILDLNRASFIFNGKKLARDNSAEAIQKLMNQFAKNPKQLQLISSYANQSIF 375
              ++DN F+ D N   F+ N   ++ +N  + + K       N +  QLIS+YANQ   
Sbjct: 226 SSNDLDNDFMNDTNPFLFVVNDGLISVNNRNKML-KDFKTIVPNVEFRQLISTYANQKFL 284

Query: 376 ADSVVHLMQSIPEFAKYASKSGSASKFTAKTLTNGEVAFTAKYTTKVQAVDKIAGKPLKE 435
             S + L+   PE  +Y  K  S + +    L +G V   A   + +   +    +  K 
Sbjct: 285 RQSYLQLISEHPEIDQYQIK-HSRNIYKINFLDDGSVKLVATNLSDLDVKNDNYIQKYKS 343

Query: 436 YGLKISGILSPDKATELQRSFYLK 459
           +G++ + IL P+ +  ++ S+++K
Sbjct: 344 FGIRATIILPPNASPIMKYSYFMK 367


>gi|257471634|ref|ZP_05635633.1| hypothetical protein BaphL_02905 [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|311087470|gb|ADP67550.1| hypothetical protein CWS_03010 [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
 gi|311087954|gb|ADP68033.1| hypothetical protein CWU_03765 [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 205

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 2/144 (1%)

Query: 316 CGKNIDNQFILDLNRASFIFNGKKLARDNSAEAIQKLMNQFAKNPKQLQLISSYANQSIF 375
              ++DN F+ D N   F+ N   ++ +N  + + K       N +  QLIS+YANQ   
Sbjct: 64  SSNDLDNDFMNDTNPFLFVVNNGLISVNNRNKML-KDFKTIVPNVEFRQLISTYANQKFL 122

Query: 376 ADSVVHLMQSIPEFAKYASKSGSASKFTAKTLTNGEVAFTAKYTTKVQAVDKIAGKPLKE 435
             S + L+   PE  +Y  K  S + +    L +G V   A   + +   +    +  K 
Sbjct: 123 RQSYLQLISEHPEIDQYQIK-HSRNIYKINFLDDGSVKLVATNLSDLDVKNDNYIQKYKS 181

Query: 436 YGLKISGILSPDKATELQRSFYLK 459
           +G++ + IL P+ +  ++ S+++K
Sbjct: 182 FGIRATIILPPNASPIMKYSYFMK 205


>gi|311086306|gb|ADP66388.1| hypothetical protein CWO_03065 [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086880|gb|ADP66961.1| hypothetical protein CWQ_03105 [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
          Length = 205

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 2/144 (1%)

Query: 316 CGKNIDNQFILDLNRASFIFNGKKLARDNSAEAIQKLMNQFAKNPKQLQLISSYANQSIF 375
              ++DN F+ D N   F+ N   ++ +N  + + K       N +  QLIS+YANQ   
Sbjct: 64  SSNDLDNDFMNDTNPFLFVVNDGLISVNNRNKML-KDFKTIVPNVEFRQLISTYANQKFL 122

Query: 376 ADSVVHLMQSIPEFAKYASKSGSASKFTAKTLTNGEVAFTAKYTTKVQAVDKIAGKPLKE 435
             S + L+   PE  +Y  K  S + +    L +G V   A   + +   +    +  K 
Sbjct: 123 RQSYLQLISEHPEIDQYQIK-HSRNIYKINFLDDGSVKLVATNLSDLDVKNDNYIQKYKS 181

Query: 436 YGLKISGILSPDKATELQRSFYLK 459
           +G++ + IL P+ +  ++ S+++K
Sbjct: 182 FGIRATIILPPNASPIMKYSYFMK 205


>gi|320538774|ref|ZP_08038452.1| hypothetical protein SSYM_0354 [Serratia symbiotica str. Tucson]
 gi|320031163|gb|EFW13164.1| hypothetical protein SSYM_0354 [Serratia symbiotica str. Tucson]
          Length = 113

 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 5/50 (10%)

Query: 43  HQVRELTQNKASTEQVIDISTKVKDVAVDVAVSMIPIYGTYREFKKGNYG 92
           H  +EL   K  T+QV        +++ +VA+SMIPIYGT REF+KGN G
Sbjct: 69  HITQELAMEKKVTDQV-----SAGEISKEVALSMIPIYGTIREFQKGNIG 113


>gi|27905000|ref|NP_778126.1| hypothetical protein bbp529 [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|34098501|sp|Q89A26|Y529_BUCBP RecName: Full=Uncharacterized protein bbp_529; AltName: Full=yba3
 gi|27904398|gb|AAO27231.1| hypothetical protein bbp_529 [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
          Length = 398

 Score = 47.4 bits (111), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 73/149 (48%), Gaps = 18/149 (12%)

Query: 320 IDNQFILDLNRASFIFNGKKLAR-------DNSAEAIQKLMNQFAKNPKQLQLISSYANQ 372
           +D+ FI +   +    NG+++++       D+   AI  L ++        QLISS+++Q
Sbjct: 259 LDDSFIFEGEHSILQINGQQVSKYSPKTMLDDFKTAIPDLASR--------QLISSFSHQ 310

Query: 373 SIFADSVVHLMQSIPEFAKYASKSGSASKFTAKTLTNGEVAFTAKYTTKVQAVDKIAG-K 431
            IF+   + L    P+  K+  K    S +    + +G   FTA     +++  + +  K
Sbjct: 311 GIFSQPYIELFSEHPDLVKFKPKDSQFS-YVVHEVEDGVFQFTATSQADLESSYETSDHK 369

Query: 432 PLKEYGLKISGILSPDKATE-LQRSFYLK 459
               +G+++S  LS DK+ E ++ S+YL+
Sbjct: 370 KYNAFGVQVSMTLSKDKSPEDVEYSYYLR 398


>gi|73983496|ref|XP_540777.2| PREDICTED: similar to Mucin-5B precursor (Mucin 5 subtype B,
            tracheobronchial) (High molecular weight salivary mucin
            MG1) (Sublingual gland mucin) [Canis familiaris]
          Length = 4944

 Score = 46.2 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 11/159 (6%)

Query: 109  VGYGARAAINLVRGGSIALKAGTAGTMIAAKEACT---IAQATEKTAKLTALTKEGITSI 165
            V YG     N  RGG   L              CT   +  +T +T   +  T +G+T+ 
Sbjct: 2135 VSYGLICRNNRQRGGRPCLNYHIRVLCCEEDSNCTSQRVTASTTQTGPSSPGTSQGVTAS 2194

Query: 166  RTIEGSSVTIKSESIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINS 225
                G S  + S+ + T    S+T T   S  + +  T STT+IG ++ V  + ++   +
Sbjct: 2195 TIQTGPSSAVTSQGVTT----STTQTGPSSPATSQRLTASTTQIGPSSAVTSQGVTTSTT 2250

Query: 226  QLSKSTP---QGIWTKALTKADPALESIYQRGKIFSNTI 261
            Q   S+P   QG+ T + T+  P+  +   R  + +  I
Sbjct: 2251 QTGPSSPGTSQGV-TASTTQTGPSSPATSHRLTVSTTQI 2288


>gi|6164595|gb|AAF04457.1|AF078161_1 lacunin [Manduca sexta]
          Length = 3198

 Score = 44.3 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 60/120 (50%), Gaps = 6/120 (5%)

Query: 143  TIAQATEKTAKLTALTKEGITSIRTIEGSSVTIKSESIGTKASISSTNTAEKSAISQKIT 202
            T+ + + + +   A+T E  + I T E +  T  SE +  K +++   T   S +S  I 
Sbjct: 1316 TVTEESTEPSSTEAITSEKTSVISTSEETGKTSVSEEVTVKTTVTDEATEITSTVS--IE 1373

Query: 203  TNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADPALESIYQRGKIFSNTIK 262
            T  T+  G T E+  ++ SKI S    +T  GI T   T+++ +  S  ++G++ S T +
Sbjct: 1374 TKETSVSGSTEELSTQASSKIES---PTTESGI-TSHTTESEESTVSTTEKGEVTSETTE 1429


>gi|297579269|ref|ZP_06941197.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297536863|gb|EFH75696.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 1590

 Score = 41.2 bits (95), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 18/61 (29%), Positives = 31/61 (50%)

Query: 48  LTQNKASTEQVIDISTKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIP 107
           LTQ+       +  +    D A  V   ++P++ T  +F+KG+YG   +G ISD    +P
Sbjct: 913 LTQHLIDNRDQLKTTVTAGDYAKGVMQMIVPVWATVEDFQKGDYGMASLGLISDIGFFLP 972

Query: 108 V 108
           +
Sbjct: 973 I 973


>gi|229523778|ref|ZP_04413183.1| hypothetical protein VCA_001355 [Vibrio cholerae bv. albensis
           VL426]
 gi|229337359|gb|EEO02376.1| hypothetical protein VCA_001355 [Vibrio cholerae bv. albensis
           VL426]
          Length = 1486

 Score = 40.8 bits (94), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 17/61 (27%), Positives = 31/61 (50%)

Query: 48  LTQNKASTEQVIDISTKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIP 107
           LTQ+       +  +T   D A  V  +++P++ T  +F+ GN+G   +G  SD    +P
Sbjct: 810 LTQHLIDKRDQLKTTTTAWDYAKGVMQAIVPVWATVEDFQNGNHGMATLGLFSDVGFFLP 869

Query: 108 V 108
           +
Sbjct: 870 I 870


>gi|261211805|ref|ZP_05926092.1| hypothetical protein VCJ_002068 [Vibrio sp. RC341]
 gi|260839155|gb|EEX65787.1| hypothetical protein VCJ_002068 [Vibrio sp. RC341]
          Length = 1480

 Score = 40.4 bits (93), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 28/47 (59%)

Query: 62  STKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPV 108
           +T   D A  V   ++P++GT  +F++G++G   +G ISD    +P+
Sbjct: 816 TTTAWDYAKGVMQMIVPVWGTVEDFQRGDHGMASLGLISDVGFFLPI 862


>gi|163800536|ref|ZP_02194437.1| inner membrane protein, putative [Vibrio sp. AND4]
 gi|159175979|gb|EDP60773.1| inner membrane protein, putative [Vibrio sp. AND4]
          Length = 1581

 Score = 40.4 bits (93), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 4/52 (7%)

Query: 67  DVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAIN 118
           D A  V   ++P++ T  +F+KGNY  G +G +SD    +P+     +AA N
Sbjct: 915 DYAKGVMQMIVPVWATVEDFQKGNYYMGSLGLLSDVGFFLPI----GKAAFN 962


>gi|58615294|gb|AAW80256.1| adenylate cyclase-like protein [Vibrio cholerae]
          Length = 1046

 Score = 40.4 bits (93), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 15/47 (31%), Positives = 28/47 (59%)

Query: 62  STKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPV 108
           +T   D A  V   ++P++GT  +F++G++G   +G ISD    +P+
Sbjct: 383 TTTAWDYAKGVMQMIVPVWGTVEDFQRGDHGMASLGLISDVGFFLPI 429


>gi|145295171|ref|YP_001137992.1| hypothetical protein cgR_1113 [Corynebacterium glutamicum R]
 gi|140845091|dbj|BAF54090.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 563

 Score = 38.5 bits (88), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 3/101 (2%)

Query: 14  NNIERKEIADKLIKNISIVDKTMDVLPLY-HQVRELTQNKASTEQVIDISTKV--KDVAV 70
           NNI    +A   + +I  V + +D    + + +     N      V++I+T V    +A+
Sbjct: 402 NNIGIVAVALIAVVSIDWVLRRIDEFSTHLNAISAFKVNTIWRISVVNITTLVLGSTLAL 461

Query: 71  DVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPVVGY 111
           ++   +   YG Y E + G +GWG++  I  AA L+P+V +
Sbjct: 462 ELTSLINEPYGGYTELQNGLFGWGVLAVILVAAFLLPMVSW 502


>gi|322499341|emb|CBZ34414.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 1403

 Score = 38.5 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 2/103 (1%)

Query: 108 VVGYGARAAINLVRGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEGITSIRT 167
           V G G R A   V     ALKAG A     ++++ T  +A  ++  L A     +     
Sbjct: 189 VDGVGERDAATAVSTSPEALKAGVAPANTGSRQSDTPREAVSESPLLAAPRASKMRGCCL 248

Query: 168 IEGS-SVTIKSESIGTKASISSTNTAEKSAISQKITTNSTTEI 209
              S S+ +K+ S    AS +   TAEK AIS  +T  ++T++
Sbjct: 249 THASRSIAVKTASTAEDAS-AVCRTAEKCAISAPLTERTSTDL 290


>gi|321399511|emb|CBZ08707.1| putative protein phosphotase [Leishmania infantum JPCM5]
          Length = 1403

 Score = 38.5 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 2/103 (1%)

Query: 108 VVGYGARAAINLVRGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEGITSIRT 167
           V G G R A   V     ALKAG A     ++++ T  +A  ++  L A     +     
Sbjct: 189 VDGVGERDAATAVSTSPEALKAGVAPANTGSRQSDTPREAVSESPLLAAPRASKMRGCCL 248

Query: 168 IEGS-SVTIKSESIGTKASISSTNTAEKSAISQKITTNSTTEI 209
              S S+ +K+ S    AS +   TAEK AIS  +T  ++T++
Sbjct: 249 THASRSIAVKTASTAEDAS-AVCRTAEKCAISAPLTERTSTDL 290


>gi|156551686|ref|XP_001601735.1| PREDICTED: similar to papilin [Nasonia vitripennis]
          Length = 2437

 Score = 38.5 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 5/128 (3%)

Query: 119  LVRGGSIALKAGTAGT--MIAAKEACTIAQATEKTAKLTALTKEGITSIRTIEGSSVTIK 176
            LV G +  +++ T+ T    A +   T   ATE  A  T  T+ G T    +  S  T +
Sbjct: 922  LVSGETQTVESVTSDTTEFGATETGATETGATETEATETGATETGATESSDVTESGATQQ 981

Query: 177  SESIGTKASISSTNTAEKSAISQKIT---TNSTTEIGKTTEVVEESISKINSQLSKSTPQ 233
            S   GT  S  +T + E  A S+  T   T+ TTE G +T   E  ++  +  +   T  
Sbjct: 982  STVEGTSESGMTTESGETEATSEYSTIGATDETTESGVSTATEETDLTGQSEIMDLFTTP 1041

Query: 234  GIWTKALT 241
                KA+T
Sbjct: 1042 SAVDKAIT 1049


>gi|121725976|ref|ZP_01679275.1| hypothetical protein VCV52_0783 [Vibrio cholerae V52]
 gi|121631458|gb|EAX63828.1| hypothetical protein VCV52_0783 [Vibrio cholerae V52]
          Length = 1533

 Score = 38.1 bits (87), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 12/43 (27%), Positives = 26/43 (60%)

Query: 66   KDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPV 108
            +D+A  V ++++P++GT  + K G+ G   +G + D    +P+
Sbjct: 966  RDIAYQVLMAILPVWGTVEDIKSGDAGMATLGVLGDVMFFLPI 1008


>gi|260063169|ref|YP_003196249.1| ATP-dependent RNA helicase [Robiginitalea biformata HTCC2501]
 gi|88783263|gb|EAR14435.1| ATP-dependent RNA helicase [Robiginitalea biformata HTCC2501]
          Length = 579

 Score = 38.1 bits (87), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 4/103 (3%)

Query: 335 FNGKKLARDNSAEAIQKLMNQFAKNPKQLQLISSYANQSIFADSVVHLMQ-SIP-EFAKY 392
           +N   L  D S +    +MN F K   QL + +  A + I  D V H++   +P E   Y
Sbjct: 254 YNAGALHGDLSQQQRDLVMNAFRKRQLQLLVATDVAARGIDVDDVTHVIHYQLPDETETY 313

Query: 393 ASKSGSASKFTAKTLTNGEVAFTAKYTTKVQAVDKIAGKPLKE 435
             +SG   +     ++   V  T     +++A++KI G+P ++
Sbjct: 314 THRSGRTGRAGKSGVSM--VILTRSEQRRIRAIEKIIGRPFEQ 354


>gi|254225070|ref|ZP_04918684.1| hypothetical protein VCV51_0554 [Vibrio cholerae V51]
 gi|125622457|gb|EAZ50777.1| hypothetical protein VCV51_0554 [Vibrio cholerae V51]
          Length = 1328

 Score = 38.1 bits (87), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 12/43 (27%), Positives = 26/43 (60%)

Query: 66   KDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPV 108
            +D+A  V ++++P++GT  + K G+ G   +G + D    +P+
Sbjct: 963  RDIAYQVLMAILPVWGTVEDIKSGDAGMATLGVLGDVMFFLPI 1005


>gi|121585705|ref|ZP_01675500.1| hypothetical protein VC274080_0898 [Vibrio cholerae 2740-80]
 gi|153818047|ref|ZP_01970714.1| hypothetical protein A5C_0837 [Vibrio cholerae NCTC 8457]
 gi|153822035|ref|ZP_01974702.1| hypothetical protein A5E_0912 [Vibrio cholerae B33]
 gi|227080999|ref|YP_002809550.1| hypothetical protein VCM66_0779 [Vibrio cholerae M66-2]
 gi|229505566|ref|ZP_04395076.1| hypothetical protein VCF_000777 [Vibrio cholerae BX 330286]
 gi|229510762|ref|ZP_04400241.1| hypothetical protein VCE_002169 [Vibrio cholerae B33]
 gi|229517883|ref|ZP_04407327.1| hypothetical protein VCC_001907 [Vibrio cholerae RC9]
 gi|229608586|ref|YP_002879234.1| hypothetical protein VCD_003506 [Vibrio cholerae MJ-1236]
 gi|254847958|ref|ZP_05237308.1| inner membrane protein [Vibrio cholerae MO10]
 gi|255744622|ref|ZP_05418573.1| beta/gamma crystallin domain-containing protein [Vibrio cholera CIRS
            101]
 gi|262161246|ref|ZP_06030357.1| beta/gamma crystallin domain-containing protein [Vibrio cholerae
            INDRE 91/1]
 gi|298499049|ref|ZP_07008856.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|121550068|gb|EAX60084.1| hypothetical protein VC274080_0898 [Vibrio cholerae 2740-80]
 gi|126511393|gb|EAZ73987.1| hypothetical protein A5C_0837 [Vibrio cholerae NCTC 8457]
 gi|126520429|gb|EAZ77652.1| hypothetical protein A5E_0912 [Vibrio cholerae B33]
 gi|227008887|gb|ACP05099.1| hypothetical protein VCM66_0779 [Vibrio cholerae M66-2]
 gi|229344598|gb|EEO09572.1| hypothetical protein VCC_001907 [Vibrio cholerae RC9]
 gi|229350727|gb|EEO15668.1| hypothetical protein VCE_002169 [Vibrio cholerae B33]
 gi|229357789|gb|EEO22706.1| hypothetical protein VCF_000777 [Vibrio cholerae BX 330286]
 gi|229371241|gb|ACQ61664.1| hypothetical protein VCD_003506 [Vibrio cholerae MJ-1236]
 gi|254843663|gb|EET22077.1| inner membrane protein [Vibrio cholerae MO10]
 gi|255737653|gb|EET93047.1| beta/gamma crystallin domain-containing protein [Vibrio cholera CIRS
            101]
 gi|262028996|gb|EEY47649.1| beta/gamma crystallin domain-containing protein [Vibrio cholerae
            INDRE 91/1]
 gi|297543382|gb|EFH79432.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
          Length = 1533

 Score = 38.1 bits (87), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 12/43 (27%), Positives = 26/43 (60%)

Query: 66   KDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPV 108
            +D+A  V ++++P++GT  + K G+ G   +G + D    +P+
Sbjct: 966  RDIAYQVLMAILPVWGTVEDIKSGDAGMATLGVLGDVMFFLPI 1008


>gi|153820579|ref|ZP_01973246.1| inner membrane protein, putative [Vibrio cholerae NCTC 8457]
 gi|126508877|gb|EAZ71471.1| inner membrane protein, putative [Vibrio cholerae NCTC 8457]
          Length = 300

 Score = 37.7 bits (86), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 12/43 (27%), Positives = 26/43 (60%)

Query: 66  KDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPV 108
           +D+A  V ++++P++GT  + K G+ G   +G + D    +P+
Sbjct: 192 RDIAYQVLMAILPVWGTVEDIKSGDAGMATLGVLGDVMFFLPI 234


>gi|15640839|ref|NP_230470.1| inner membrane protein, putative [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|9655272|gb|AAF93985.1| inner membrane protein, putative [Vibrio cholerae O1 biovar El Tor
           str. N16961]
          Length = 1112

 Score = 37.7 bits (86), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 12/43 (27%), Positives = 26/43 (60%)

Query: 66  KDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPV 108
           +D+A  V ++++P++GT  + K G+ G   +G + D    +P+
Sbjct: 545 RDIAYQVLMAILPVWGTVEDIKSGDAGMATLGVLGDVMFFLPI 587


>gi|13377544|gb|AAK20779.1|AF325734_5 putative inner membrane protein [Vibrio cholerae]
 gi|3004928|gb|AAC12276.1| putative inner membrane protein [Vibrio cholerae]
          Length = 1111

 Score = 37.7 bits (86), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 12/43 (27%), Positives = 26/43 (60%)

Query: 66  KDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPV 108
           +D+A  V ++++P++GT  + K G+ G   +G + D    +P+
Sbjct: 544 RDIAYQVLMAILPVWGTVEDIKSGDAGMATLGVLGDVMFFLPI 586


>gi|147673479|ref|YP_001216303.1| putative inner membrane protein [Vibrio cholerae O395]
 gi|13377513|gb|AAK20749.1|AF325733_5 unknown [Vibrio cholerae]
 gi|146315362|gb|ABQ19901.1| putative inner membrane protein [Vibrio cholerae O395]
          Length = 962

 Score = 37.7 bits (86), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 12/43 (27%), Positives = 26/43 (60%)

Query: 66  KDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPV 108
           +D+A  V ++++P++GT  + K G+ G   +G + D    +P+
Sbjct: 395 RDIAYQVLMAILPVWGTVEDIKSGDAGMATLGVLGDVMFFLPI 437


>gi|284029679|ref|YP_003379610.1| hypothetical protein Kfla_1716 [Kribbella flavida DSM 17836]
 gi|283808972|gb|ADB30811.1| protein of unknown function DUF6 transmembrane [Kribbella flavida
           DSM 17836]
          Length = 301

 Score = 37.7 bits (86), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 9/65 (13%)

Query: 93  WGIVGAISDAA------LLIPVVGYGARAAINLVRGGSIALKAGTAGTMIAAKEACTIAQ 146
           WG +  + DA+      LL+PVVG GA     L+RG ++ L+ G A  +I    ACT+ +
Sbjct: 226 WGFLLRVYDASTVAPFSLLVPVVGMGAA---WLLRGEAVGLQQGIAALLIIGGMACTVIR 282

Query: 147 ATEKT 151
              +T
Sbjct: 283 RRPRT 287


>gi|307185838|gb|EFN71679.1| Papilin [Camponotus floridanus]
          Length = 2944

 Score = 37.0 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 45/158 (28%), Positives = 68/158 (43%), Gaps = 15/158 (9%)

Query: 56  EQVIDISTKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARA 115
           E  I+  T   +   +V  S     GT   F+      G    I + +   P  G GA A
Sbjct: 787 ETTIEAGTGTTEFGTEVTESSDITEGTDVTFE------GSGTTIEEGSGTSPEEGSGASA 840

Query: 116 AINLVRGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEGITSIRTIEGSSVTI 175
           + + V   ++  +   A T     E+   ++  E TA  ++   EG T   TIE S +T 
Sbjct: 841 STSAVTEETV--EETQASTSAVTSESDISSETAESTASESS---EGST---TIESSDMTT 892

Query: 176 KSESIGTKASISSTNTAEKSAISQKITTNSTTEIGKTT 213
            S  I T+ SI S++   +S  S  ITT+ TT   +TT
Sbjct: 893 GSSDITTE-SIGSSDITTESTGSSDITTDLTTGSAETT 929


Searching..................................................done


Results from round 2




>gi|254780449|ref|YP_003064862.1| hypothetical protein CLIBASIA_01670 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040126|gb|ACT56922.1| hypothetical protein CLIBASIA_01670 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 459

 Score =  626 bits (1614), Expect = e-177,   Method: Composition-based stats.
 Identities = 459/459 (100%), Positives = 459/459 (100%)

Query: 1   MNISEINKYFPPNNNIERKEIADKLIKNISIVDKTMDVLPLYHQVRELTQNKASTEQVID 60
           MNISEINKYFPPNNNIERKEIADKLIKNISIVDKTMDVLPLYHQVRELTQNKASTEQVID
Sbjct: 1   MNISEINKYFPPNNNIERKEIADKLIKNISIVDKTMDVLPLYHQVRELTQNKASTEQVID 60

Query: 61  ISTKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLV 120
           ISTKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLV
Sbjct: 61  ISTKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLV 120

Query: 121 RGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEGITSIRTIEGSSVTIKSESI 180
           RGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEGITSIRTIEGSSVTIKSESI
Sbjct: 121 RGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEGITSIRTIEGSSVTIKSESI 180

Query: 181 GTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKAL 240
           GTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKAL
Sbjct: 181 GTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKAL 240

Query: 241 TKADPALESIYQRGKIFSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSEFKM 300
           TKADPALESIYQRGKIFSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSEFKM
Sbjct: 241 TKADPALESIYQRGKIFSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSEFKM 300

Query: 301 VPLSDQTLFRDFQGLCGKNIDNQFILDLNRASFIFNGKKLARDNSAEAIQKLMNQFAKNP 360
           VPLSDQTLFRDFQGLCGKNIDNQFILDLNRASFIFNGKKLARDNSAEAIQKLMNQFAKNP
Sbjct: 301 VPLSDQTLFRDFQGLCGKNIDNQFILDLNRASFIFNGKKLARDNSAEAIQKLMNQFAKNP 360

Query: 361 KQLQLISSYANQSIFADSVVHLMQSIPEFAKYASKSGSASKFTAKTLTNGEVAFTAKYTT 420
           KQLQLISSYANQSIFADSVVHLMQSIPEFAKYASKSGSASKFTAKTLTNGEVAFTAKYTT
Sbjct: 361 KQLQLISSYANQSIFADSVVHLMQSIPEFAKYASKSGSASKFTAKTLTNGEVAFTAKYTT 420

Query: 421 KVQAVDKIAGKPLKEYGLKISGILSPDKATELQRSFYLK 459
           KVQAVDKIAGKPLKEYGLKISGILSPDKATELQRSFYLK
Sbjct: 421 KVQAVDKIAGKPLKEYGLKISGILSPDKATELQRSFYLK 459


>gi|315122103|ref|YP_004062592.1| hypothetical protein CKC_01765 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495505|gb|ADR52104.1| hypothetical protein CKC_01765 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 464

 Score =  423 bits (1086), Expect = e-116,   Method: Composition-based stats.
 Identities = 163/418 (38%), Positives = 241/418 (57%), Gaps = 30/418 (7%)

Query: 62  STKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVR 121
           S+K+ + A +  +S+IPIYGT + FKKG  GWGI GAI+D   L+PVVGYGA+    L R
Sbjct: 53  SSKIGETAKEALLSLIPIYGTIQSFKKGEIGWGIFGAITDVLTLVPVVGYGAKMVGALAR 112

Query: 122 GGSIALKAGTAGTMIAAKEACTIAQATEKTAKL------TALTKEGITSIR----TIEGS 171
           GG+ A+K   AG + A+  A T A AT   A L      T    EG ++      T++ +
Sbjct: 113 GGNAAIKISKAGAIAASATASTYAAATRGGAALADGALITKYAMEGESAFNAGSATVKAT 172

Query: 172 SVTIKSESIGTKASISSTNTAEKSAISQKITTNS------TTEIGKTT-EVVEESISKI- 223
           S T+   ++ TKA+ S+ +T +K+AI   I+ N+      T E+ K   +VVE+S  K  
Sbjct: 173 SSTLYESNVITKAAESTHSTLDKAAI-LPISKNTIKTSVNTAEMDKIAAKVVEQSTKKTT 231

Query: 224 --NSQLSKSTPQGIWTKALTKADPALESIYQRGKIFSNTIKNNAFIEKLAHTTKAIDKKI 281
             N +  K   +  +  +L   DP LE +YQ GK  +   K+ +  EK+  T+ ++ K  
Sbjct: 232 LSNKKTIKQASKKFFIASLRAVDPGLELLYQGGK--AAIRKSRSIPEKIMKTSHSLPK-- 287

Query: 282 PFIGNQWRDINTAHSEFKMVPLSDQTLFRDFQGLCGKNIDNQFILDLNRASFIFNGKKLA 341
               N W++I++  SE+KMV LSD++LFR+F+ L    +D QF+LDLNRA +I NGK + 
Sbjct: 288 ----NTWKNIDSIPSEYKMVSLSDESLFRNFKQLNKNELDQQFLLDLNRAEYIINGKNMR 343

Query: 342 RDNSAEAIQKLMNQFAKNPKQLQLISSYANQSIFADSVVHLMQSIPEFAKYASKSGSASK 401
             N    +  L   FA +P++LQ+IS+YA+Q IFAD + +LM++IP    Y SK+G  + 
Sbjct: 344 DTNQKSQLAYLQKTFANDPQKLQIISAYAHQGIFADGISYLMETIPNMLSYGSKNGKTT- 402

Query: 402 FTAKTLTNGEVAFTAKYTTKVQAVDKIAGKPLKEYGLKISGILSPDKATELQRSFYLK 459
           F   TL    V  +AKYT  +   ++    PL+EYGLKI  IL P+KA +  + FY K
Sbjct: 403 FQINTLGEEGVRLSAKYTASLVTENQAIKNPLREYGLKIDTILFPNKAPQFTQYFYTK 460


>gi|254780448|ref|YP_003064861.1| hypothetical protein CLIBASIA_01665 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040125|gb|ACT56921.1| hypothetical protein CLIBASIA_01665 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 311

 Score =  345 bits (885), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 118/384 (30%), Positives = 179/384 (46%), Gaps = 75/384 (19%)

Query: 76  MIPIYGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGGSIALKAGTAGTM 135
           MIP+YGT +EFKKGNYGWG +G +SD ALL     Y  +    LVRG SIA K  T G  
Sbjct: 1   MIPVYGTIQEFKKGNYGWGALGIVSDVALLAIPAAYLGKVLFGLVRGSSIATKIATTGIA 60

Query: 136 IAAKEACTIAQATEKTAKLTALTKEGITSIRTIEGSSVTIKSESIGTKASISSTNTAEKS 195
              +EA  + + T++ A    L KEGI +   +EG S  IKSES+G K  IS++  ++  
Sbjct: 61  TVVQEATVMTKTTQEGA---LLAKEGIEATHIMEGGSTAIKSESVGAKELISASQNSQ-- 115

Query: 196 AISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADPALESIYQRGK 255
                    + T+ G  ++                      TKA                
Sbjct: 116 ---------TVTQTGNISDA---------------------TKA---------------- 129

Query: 256 IFSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSEFKMVPLSDQTLFRDFQGL 315
             S+TIK+   I++    ++AI +K+P              E+  +       FRDF+ L
Sbjct: 130 --SSTIKDAQSIDR----SQAIFQKMPL------------EEYPRLQKIGINYFRDFK-L 170

Query: 316 CGKNIDNQFILDLNRAS-FIFNGKKLARDNSAEAIQKLMNQFAKNPKQLQLISSYANQSI 374
            G N   + +LD +RA+ FI +GKK+  D++   + +L   F K+ +++QLISSYA++ I
Sbjct: 171 LGTNKVYKNLLDASRATEFIIDGKKINIDSAQNMLAELNKIFPKDFEKVQLISSYAHEHI 230

Query: 375 FADSVVHLMQSIPEFAKYASKSGSASKFTAKTLTNGEVAFTAKYTTKVQAVDKIAGKPLK 434
           F       + ++     Y   S     +   TL +  ++F AK    V  ++   G   +
Sbjct: 231 FCKPFTKDLLNLANKNIYQ-LSNPRYSYQFNTLKDKTISFVAKEEGLVTYLN---GSLHR 286

Query: 435 EYGLKISGILSPDKATELQRSFYL 458
            YG+K  GILS +   EL  S Y+
Sbjct: 287 NYGIKAEGILSRNAPPELHFSSYV 310


>gi|320538773|ref|ZP_08038451.1| hypothetical protein SSYM_0353 [Serratia symbiotica str. Tucson]
 gi|320031162|gb|EFW13163.1| hypothetical protein SSYM_0353 [Serratia symbiotica str. Tucson]
          Length = 210

 Score =  171 bits (432), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 58/226 (25%), Positives = 104/226 (46%), Gaps = 24/226 (10%)

Query: 240 LTKADPALESIYQRGKIFSNTIKNNAFIEKLAHTTKAIDKKIPFIGN--QWRDINTAHSE 297
           +   DP +E +Y+     S+ I+     +  ++ +  I K    + +  +W+   ++   
Sbjct: 1   MRAMDPGIELVYEG----SSLIR-RQTAKMASNISSTIVKSADALEDFGKWKKFPSS--- 52

Query: 298 FKMVPLSD--QTLFRDFQGL-CGKNIDNQFILDLNRASFIFNGKKLARDNSAEAIQKLMN 354
              VP+ D    L  DF  +     +  QF+LD +RA++  +GK + R +  +       
Sbjct: 53  ---VPVLDTISILQDDFHKIKVTTQLSEQFLLDFDRATYKVDGKVIPRGDYIQ-----FE 104

Query: 355 QFAKNPKQLQLISSYANQSIFADSVVHLMQSIPE-FAKYASKSGSASKFTAKTLTNGEVA 413
           +   + K+ QLISSYANQ   AD  +  M   P+ FAK+ + + + S +    + + ++ 
Sbjct: 105 KAIPDIKKRQLISSYANQMSLADPSIGAMSFFPDSFAKHGAHNSNVS-YEIWNIPDSKIK 163

Query: 414 FTAKYTTKVQAVDKIAG-KPLKEYGLKISGILSPDKATELQRSFYL 458
             AK  +K+  VD   G K    YGLK    LS +   +   S+YL
Sbjct: 164 LIAKVESKLTPVDLADGEKIYSSYGLKAEMTLSENTPPKYNYSYYL 209


>gi|257471634|ref|ZP_05635633.1| hypothetical protein BaphL_02905 [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|311087470|gb|ADP67550.1| hypothetical protein CWS_03010 [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
 gi|311087954|gb|ADP68033.1| hypothetical protein CWU_03765 [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 205

 Score =  170 bits (430), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 87/198 (43%), Gaps = 4/198 (2%)

Query: 263 NNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSEFKMVPLSDQTLFRDFQGL-CGKNID 321
           +  F +++    +          + W   +  +S F  +  + +   + ++ L    ++D
Sbjct: 11  DQNFRQRMNKNIQESYANDFIDESTWTVSDQLNS-FNNIQSTIKHFQKKYEFLKSSNDLD 69

Query: 322 NQFILDLNRASFIFNGKKLARDNSAEAIQKLMNQFAKNPKQLQLISSYANQSIFADSVVH 381
           N F+ D N   F+ N   ++ +N  + + K       N +  QLIS+YANQ     S + 
Sbjct: 70  NDFMNDTNPFLFVVNNGLISVNNRNKML-KDFKTIVPNVEFRQLISTYANQKFLRQSYLQ 128

Query: 382 LMQSIPEFAKYASKSGSASKFTAKTLTNGEVAFTAKYTTKVQAVDKIAGKPLKEYGLKIS 441
           L+   PE  +Y  K  S + +    L +G V   A   + +   +    +  K +G++ +
Sbjct: 129 LISEHPEIDQYQIK-HSRNIYKINFLDDGSVKLVATNLSDLDVKNDNYIQKYKSFGIRAT 187

Query: 442 GILSPDKATELQRSFYLK 459
            IL P+ +  ++ S+++K
Sbjct: 188 IILPPNASPIMKYSYFMK 205


>gi|311086306|gb|ADP66388.1| hypothetical protein CWO_03065 [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086880|gb|ADP66961.1| hypothetical protein CWQ_03105 [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
          Length = 205

 Score =  169 bits (428), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 87/198 (43%), Gaps = 4/198 (2%)

Query: 263 NNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSEFKMVPLSDQTLFRDFQGL-CGKNID 321
           +  F +++    +          + W   +  +S F  +  + +   + ++ L    ++D
Sbjct: 11  DQNFRQRMNKNIQESYANDFIDESTWTVSDQLNS-FNNIQSTIKHFQKKYEFLKSSNDLD 69

Query: 322 NQFILDLNRASFIFNGKKLARDNSAEAIQKLMNQFAKNPKQLQLISSYANQSIFADSVVH 381
           N F+ D N   F+ N   ++ +N  + + K       N +  QLIS+YANQ     S + 
Sbjct: 70  NDFMNDTNPFLFVVNDGLISVNNRNKML-KDFKTIVPNVEFRQLISTYANQKFLRQSYLQ 128

Query: 382 LMQSIPEFAKYASKSGSASKFTAKTLTNGEVAFTAKYTTKVQAVDKIAGKPLKEYGLKIS 441
           L+   PE  +Y  K  S + +    L +G V   A   + +   +    +  K +G++ +
Sbjct: 129 LISEHPEIDQYQIK-HSRNIYKINFLDDGSVKLVATNLSDLDVKNDNYIQKYKSFGIRAT 187

Query: 442 GILSPDKATELQRSFYLK 459
            IL P+ +  ++ S+++K
Sbjct: 188 IILPPNASPIMKYSYFMK 205


>gi|15617174|ref|NP_240387.1| hypothetical protein BU584 [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|11387313|sp|P57644|Y584_BUCAI RecName: Full=Uncharacterized protein BU584; AltName: Full=yba3
 gi|25373122|pir||A84998 hypothetical protein [imported] - Buchnera sp. (strain APS)
 gi|10039239|dbj|BAB13273.1| hypothetical protein [Buchnera aphidicola str. APS (Acyrthosiphon
           pisum)]
          Length = 367

 Score =  169 bits (427), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 87/198 (43%), Gaps = 4/198 (2%)

Query: 263 NNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSEFKMVPLSDQTLFRDFQGL-CGKNID 321
           +  F +++    +          + W   +  +S F  +  + +   + ++ L    ++D
Sbjct: 173 DQNFRQRMNKNIQESYANDFIDESTWTVSDQLNS-FNNIQSTIKHFQKKYEFLKSSNDLD 231

Query: 322 NQFILDLNRASFIFNGKKLARDNSAEAIQKLMNQFAKNPKQLQLISSYANQSIFADSVVH 381
           N F+ D N   F+ N   ++ +N  + + K       N +  QLIS+YANQ     S + 
Sbjct: 232 NDFMNDTNPFLFVVNNALISVNNRNKML-KDFKTIVPNVEFRQLISTYANQKFLRQSYLQ 290

Query: 382 LMQSIPEFAKYASKSGSASKFTAKTLTNGEVAFTAKYTTKVQAVDKIAGKPLKEYGLKIS 441
           L+   PE  +Y  K  S + +    L +G V   A   + +   +    +  K +G++ +
Sbjct: 291 LISEHPEIDQYQIK-HSRNIYKINFLDDGSVKLVATNLSDLDVKNDNYIQKYKSFGIRAT 349

Query: 442 GILSPDKATELQRSFYLK 459
            IL P+ +  ++ S+++K
Sbjct: 350 IILPPNASPIMKYSYFMK 367


>gi|219681925|ref|YP_002468311.1| hypothetical protein BUAP5A_577 [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|219624768|gb|ACL30923.1| hypothetical protein BUAP5A_577 [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
          Length = 367

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 87/198 (43%), Gaps = 4/198 (2%)

Query: 263 NNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSEFKMVPLSDQTLFRDFQGL-CGKNID 321
           +  F +++    +          + W   +  +S F  +  + +   + ++ L    ++D
Sbjct: 173 DQNFRQRMNKNIQESYANDFIDESTWTVSDQLNS-FNNIQSTIKHFQKKYEFLKSSNDLD 231

Query: 322 NQFILDLNRASFIFNGKKLARDNSAEAIQKLMNQFAKNPKQLQLISSYANQSIFADSVVH 381
           N F+ D N   F+ N   ++ +N  + + K       N +  QLIS+YANQ     S + 
Sbjct: 232 NDFMNDTNPFLFVVNNGLISVNNRNKML-KDFKTIVPNVEFRQLISTYANQKFLRQSYLQ 290

Query: 382 LMQSIPEFAKYASKSGSASKFTAKTLTNGEVAFTAKYTTKVQAVDKIAGKPLKEYGLKIS 441
           L+   PE  +Y  K  S + +    L +G V   A   + +   +    +  K +G++ +
Sbjct: 291 LISEHPEIDQYQIK-HSRNIYKINFLDDGSVKLVATNLSDLDVKNDNYIQKYKSFGIRAT 349

Query: 442 GILSPDKATELQRSFYLK 459
            IL P+ +  ++ S+++K
Sbjct: 350 IILPPNASPIMKYSYFMK 367


>gi|219682480|ref|YP_002468864.1| hypothetical protein BUAPTUC7_578 [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219622213|gb|ACL30369.1| hypothetical protein BUAPTUC7_578 [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
          Length = 367

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 87/198 (43%), Gaps = 4/198 (2%)

Query: 263 NNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSEFKMVPLSDQTLFRDFQGL-CGKNID 321
           +  F +++    +          + W   +  +S F  +  + +   + ++ L    ++D
Sbjct: 173 DQNFRQRMNKNIQESYANDFIDESTWTVSDQLNS-FNNIQSTIKHFQKKYEFLKSSNDLD 231

Query: 322 NQFILDLNRASFIFNGKKLARDNSAEAIQKLMNQFAKNPKQLQLISSYANQSIFADSVVH 381
           N F+ D N   F+ N   ++ +N  + + K       N +  QLIS+YANQ     S + 
Sbjct: 232 NDFMNDTNPFLFVVNDGLISVNNRNKML-KDFKTIVPNVEFRQLISTYANQKFLRQSYLQ 290

Query: 382 LMQSIPEFAKYASKSGSASKFTAKTLTNGEVAFTAKYTTKVQAVDKIAGKPLKEYGLKIS 441
           L+   PE  +Y  K  S + +    L +G V   A   + +   +    +  K +G++ +
Sbjct: 291 LISEHPEIDQYQIK-HSRNIYKINFLDDGSVKLVATNLSDLDVKNDNYIQKYKSFGIRAT 349

Query: 442 GILSPDKATELQRSFYLK 459
            IL P+ +  ++ S+++K
Sbjct: 350 IILPPNASPIMKYSYFMK 367


>gi|315122104|ref|YP_004062593.1| hypothetical protein CKC_01770 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495506|gb|ADR52105.1| hypothetical protein CKC_01770 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 335

 Score =  167 bits (422), Expect = 4e-39,   Method: Composition-based stats.
 Identities = 54/168 (32%), Positives = 80/168 (47%), Gaps = 9/168 (5%)

Query: 291 INTAHSEFKMVPLSDQTLFRDFQGLCGKNIDNQFILDLNRAS-FIFNGKKLARDNSAEAI 349
           I    SE   +       F DF+ L   N   + + D ++AS FI NGKK+  D   + +
Sbjct: 163 IIPVVSENPRLKKIATNYFYDFK-LLSPNKAYKGLRDASKASEFIVNGKKINIDTPEKML 221

Query: 350 QKLMNQFAKNPKQLQLISSYANQSIFADSVVHLMQSIPEFAKY-ASKSGSASKFTAKTLT 408
           + L   F  + +++QLIS YA++ IF     H + SI     Y   K+ ++ KF A  L 
Sbjct: 222 ENLKEIFPNDFEKVQLISCYAHEGIFDAPFTHKLFSINNPKNYTGVKTYNSYKFDA--LE 279

Query: 409 NGEVAFTAKYTTKVQAVDKIAGKPLKE-YGLKISGILSPDKATELQRS 455
           +G + F+A Y      VD   G P    YG+K+ GILS     EL  +
Sbjct: 280 DGTINFSATYKGNFSPVD---GSPSTHGYGVKVDGILSKQSIPELHFT 324



 Score = 81.9 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 53/223 (23%), Positives = 82/223 (36%), Gaps = 43/223 (19%)

Query: 63  TKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRG 122
           + ++ +A    ++ IPIYGT + FK+   GWGI+G  +D   LI  +GYG + A  L+R 
Sbjct: 42  STLESIAKKSLIAAIPIYGTIQAFKEKESGWGILGITTDVLTLIG-IGYGIKGAAALIR- 99

Query: 123 GSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEGITSIRTIEGSSVTIKSESIG- 181
                                        +   A       +   IEG +  IKS ++  
Sbjct: 100 ----------------------------GSSAAATAAMAAGTSTAIEGGNALIKSSAVLV 131

Query: 182 -TKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLS-----KSTPQGI 235
            +K ++  T+    +     +  NS+  IG    VV E+        +     K      
Sbjct: 132 ESKNTLKHTDMGANTIHIDSLAQNSSKSIGTIIPVVSENPRLKKIATNYFYDFKLLSPNK 191

Query: 236 WTKALTKADPALESIYQRGKIFSNTIKNNAFIEKLAHTTKAID 278
             K L  A  A E I    KI  +T       EK+    K I 
Sbjct: 192 AYKGLRDASKASEFIVNGKKINIDT------PEKMLENLKEIF 228


>gi|27905000|ref|NP_778126.1| hypothetical protein bbp529 [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|34098501|sp|Q89A26|Y529_BUCBP RecName: Full=Uncharacterized protein bbp_529; AltName: Full=yba3
 gi|27904398|gb|AAO27231.1| hypothetical protein bbp_529 [Buchnera aphidicola str. Bp
           (Baizongia pistaciae)]
          Length = 398

 Score =  101 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 59/326 (18%), Positives = 127/326 (38%), Gaps = 24/326 (7%)

Query: 137 AAKEACTIAQATEKTAKLTALTKEGITSIRTIEGSSVTIKSESIGTKASISSTNTAEKSA 196
           A  +     + +E  A + A  K+ + S  +I  ++ +++   +      S+  T +   
Sbjct: 94  AVNQPSIFQRVSEFFAPIYAFLKDLLPSFDSITNAAKSVEDFGV------SAYQTGKD-- 145

Query: 197 ISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADPALESIYQRGKI 256
               I  +S   IG   +   +       +   S     ++   +  D   E      K 
Sbjct: 146 ----IVCDSVDAIGDMGKSAFDYTVDFG-KSIFSAVVNFFSGDSSTLDLGEE---NTEKK 197

Query: 257 FSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSEFKMVPLSDQTLFRDFQGL- 315
           F  +I +N  + +++                W+ +N    + + V  + +  F  F  L 
Sbjct: 198 FEGSIPSN--LHRVSREIHQSLMSNEISKPYWKSLNKIIGDNQQVS-TGKKFFNRFMSLR 254

Query: 316 CGKNIDNQFILDLNRASFIFNGKKLARDNSAEAIQKLMNQFAKNPKQLQLISSYANQSIF 375
               +D+ FI +   +    NG+++++ +    +         +    QLISS+++Q IF
Sbjct: 255 NTSRLDDSFIFEGEHSILQINGQQVSKYSPKTML-DDFKTAIPDLASRQLISSFSHQGIF 313

Query: 376 ADSVVHLMQSIPEFAKYASKSGSASKFTAKTLTNGEVAFTAKYTTKV-QAVDKIAGKPLK 434
           +   + L    P+  K+  K  S   +    + +G   FTA     +  + +    K   
Sbjct: 314 SQPYIELFSEHPDLVKFKPKD-SQFSYVVHEVEDGVFQFTATSQADLESSYETSDHKKYN 372

Query: 435 EYGLKISGILSPDKATE-LQRSFYLK 459
            +G+++S  LS DK+ E ++ S+YL+
Sbjct: 373 AFGVQVSMTLSKDKSPEDVEYSYYLR 398


>gi|58384653|gb|AAW72673.1| hypothetical protein [Buchnera aphidicola (Cinara cedri)]
          Length = 303

 Score = 73.0 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 76/198 (38%), Gaps = 6/198 (3%)

Query: 263 NNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSEFKMVPLSDQTLFRDFQGLC-GKNID 321
           N    + L + +K      P +  +W  + + +   K +  S Q L   F  L     ++
Sbjct: 111 NTECCDDLNNISKNFPINNPDV--RWNILRSVNFSPKTIARSKQ-LQETFHELLDSGKLE 167

Query: 322 NQFILDLNRASFIFNGKKLARDNSAEAIQKLMNQFAKNPKQLQLISSYANQSIFADSVVH 381
            +F+  L+  +   NGKK+   + A  I     +     +  QLIS+Y +  +   +  +
Sbjct: 168 QKFLDHLHGKTVYLNGKKV-LSDQAPDIMNAFRESVPEFQTQQLISTYVHPEVLDVAWEN 226

Query: 382 LMQSIPEFAKYASKSGSASKFTAKTLTNGEVAFTAKYTTKVQAVDKIAGKPLKEYGLKIS 441
           L +  P        +     +    ++           T +Q         +  +G++ +
Sbjct: 227 LFKRHPGVINRTVDN-EHYTYEIDEISPEMYKVAITKITDLQPSYSGDINEIHTHGMRAA 285

Query: 442 GILSPDKATELQRSFYLK 459
            I++ +   E++ SF+++
Sbjct: 286 MIITANFNPEMRYSFFVQ 303


>gi|116515293|ref|YP_802922.1| Yba3 [Buchnera aphidicola str. Cc (Cinara cedri)]
 gi|116257147|gb|ABJ90829.1| hypothetical protein BCc_379 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
          Length = 303

 Score = 71.9 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 76/198 (38%), Gaps = 6/198 (3%)

Query: 263 NNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSEFKMVPLSDQTLFRDFQGLC-GKNID 321
           N    + L + +K      P +  +W  + + +   K +  S Q L   F  L     ++
Sbjct: 111 NTECCDDLNNISKNFPINNPDV--RWNILRSVNFSPKTIARSKQ-LQETFHELLDSGKLE 167

Query: 322 NQFILDLNRASFIFNGKKLARDNSAEAIQKLMNQFAKNPKQLQLISSYANQSIFADSVVH 381
            +F+  L+  +   NGKK+   + A  I     +     +  QLIS+Y +  +   +  +
Sbjct: 168 QKFLDHLHGKTVYLNGKKV-LSDQAPDIMNAFRESVPEFQTQQLISTYVHPEVLDVAWEN 226

Query: 382 LMQSIPEFAKYASKSGSASKFTAKTLTNGEVAFTAKYTTKVQAVDKIAGKPLKEYGLKIS 441
           L +  P        +     +    ++           T +Q         +  +G++ +
Sbjct: 227 LSKRHPGVINRTVDN-EHYTYEIDEISPEMYKVAITKITDLQPSYSGDINEIHTHGMRAA 285

Query: 442 GILSPDKATELQRSFYLK 459
            I++ +   E++ SF+++
Sbjct: 286 MIITANFNPEMRYSFFVQ 303


>gi|229523778|ref|ZP_04413183.1| hypothetical protein VCA_001355 [Vibrio cholerae bv. albensis VL426]
 gi|229337359|gb|EEO02376.1| hypothetical protein VCA_001355 [Vibrio cholerae bv. albensis VL426]
          Length = 1486

 Score = 49.5 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 44/241 (18%), Positives = 84/241 (34%), Gaps = 34/241 (14%)

Query: 48   LTQNKASTEQVIDISTKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIP 107
            LTQ+       +  +T   D A  V  +++P++ T  +F+ GN+G   +G  SD    +P
Sbjct: 810  LTQHLIDKRDQLKTTTTAWDYAKGVMQAIVPVWATVEDFQNGNHGMATLGLFSDVGFFLP 869

Query: 108  VVGYGARAAINLVRGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEGITSIRT 167
                                  G A    A      IA++  +  K++       + +  
Sbjct: 870  ---------------------IGKAALSSAKLTGKVIAKSLPRKYKVS-------SKLNI 901

Query: 168  IEGSSVTIKSESIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQL 227
            +E  S              ++   A+++ IS   T      +   T++V+ +  K  S  
Sbjct: 902  LEIGSNKRVVGEAFDIDLKAARKQAKEAWISLPKTVFDQMNVLPVTDIVKGA--KSASLK 959

Query: 228  SKSTPQGIWTKALTKADPALESIYQRGKIFSNTIKNNAF-IEKLAHTTKAIDKKIPFIGN 286
             K   Q +        DP    +YQ      ++     F  +K+     A  K +  I +
Sbjct: 960  IKQRVQKV---KRRNTDPYAPKVYQSRDFRISSKDRPDFDPDKVVGIPSADRKVMASIAD 1016

Query: 287  Q 287
            +
Sbjct: 1017 E 1017


>gi|261211805|ref|ZP_05926092.1| hypothetical protein VCJ_002068 [Vibrio sp. RC341]
 gi|260839155|gb|EEX65787.1| hypothetical protein VCJ_002068 [Vibrio sp. RC341]
          Length = 1480

 Score = 49.1 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 58/347 (16%), Positives = 118/347 (34%), Gaps = 44/347 (12%)

Query: 59   IDISTKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAIN 118
            +  +T   D A  V   ++P++GT  +F++G++G   +G ISD    +P           
Sbjct: 813  LKTTTTAWDYAKGVMQMIVPVWGTVEDFQRGDHGMASLGLISDVGFFLP----------- 861

Query: 119  LVRGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEGITSIRTIEGSSVTIKSE 178
                       G A    A      I+++  +  K++       ++   IE  S      
Sbjct: 862  ----------IGKAAFTSAKMTGKVISKSLPRKYKVS-------SAFNVIEIGSNKRVVG 904

Query: 179  SIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTK 238
             +       +   A+ + +S   T      +   T++V+ +  K  S   K   Q I  K
Sbjct: 905  EVFDVDLKVARKQAKDAWLSLPKTIFDQMNVLPVTDIVKGA--KSASLKIKQRVQKIKRK 962

Query: 239  ALTKADPALESIYQRGKIFSNTIKNNAF-IEKLAHTTKAIDKKIPFIGNQWRDINTAHSE 297
                 DP    +YQ      ++     F  +K+        K I  I ++   +    + 
Sbjct: 963  ---NTDPYAPKVYQSRDFRISSKDRPDFDPDKVVGIPSTDRKVIANIADEENLVIGIRAV 1019

Query: 298  FKMVPLSDQTLFRDFQGLCGKNIDNQFILDLNRASFIFNGKKLARDNSAEAIQKLMNQFA 357
                    ++     + L  K+  + +      A FI   +K A+ ++   + +  +   
Sbjct: 1020 DPNNRSLLESGLYSSKSLLIKSKSSDW---GPHAGFIPVDQKYAKASARAQVDRFNHYSE 1076

Query: 358  KNPKQLQLISSYANQSIFADSVVHLMQSIPEF----AKYASKSGSAS 400
               K    +  +       D  +  +QS         +Y+SK+G   
Sbjct: 1077 NALKSRAAVPVH---LSIDDKRLKELQSGDNPLIPELEYSSKTGMYY 1120


>gi|58615294|gb|AAW80256.1| adenylate cyclase-like protein [Vibrio cholerae]
          Length = 1046

 Score = 48.8 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 75/206 (36%), Gaps = 34/206 (16%)

Query: 59  IDISTKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAIN 118
           +  +T   D A  V   ++P++GT  +F++G++G   +G ISD    +P           
Sbjct: 380 LKTTTTAWDYAKGVMQMIVPVWGTVEDFQRGDHGMASLGLISDVGFFLP----------- 428

Query: 119 LVRGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEGITSIRTIEGSSVTIKSE 178
                      G A    A      I+++  +  K++       ++   IE  S      
Sbjct: 429 ----------IGKAAFTSAKMTGKVISKSLPRKYKVS-------SAFNVIEIGSNKRVVG 471

Query: 179 SIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTK 238
            +       +   A+ + +S   T      +   T++V+ +  K  S   K   Q I  K
Sbjct: 472 EVFDVDLKVARKKAKDAWLSLPKTIFDQMNVLPVTDIVKGA--KSASLKIKQRVQKIKRK 529

Query: 239 ALTKADPALESIYQRGKIFSNTIKNN 264
                DP    +YQ  + F  + K+ 
Sbjct: 530 ---NTDPYAPKVYQ-SRDFRISSKDR 551


>gi|297579269|ref|ZP_06941197.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297536863|gb|EFH75696.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 1590

 Score = 48.8 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 78/221 (35%), Gaps = 34/221 (15%)

Query: 48   LTQNKASTEQVIDISTKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIP 107
            LTQ+       +  +    D A  V   ++P++ T  +F+KG+YG   +G ISD    +P
Sbjct: 913  LTQHLIDNRDQLKTTVTAGDYAKGVMQMIVPVWATVEDFQKGDYGMASLGLISDIGFFLP 972

Query: 108  VVGYGARAAINLVRGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEGITSIRT 167
                                  G A           I+++  +  K++       +++  
Sbjct: 973  ---------------------IGKAAFTTGKMTGKVISKSLPRKYKVS-------SALNV 1004

Query: 168  IEGSSVTIKSESIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQL 227
            +E  S               +   A+++ +S   T      +   T++V+ +  K  S  
Sbjct: 1005 LEIGSNKRVVGEAFDIDLKVARKQAKEAWLSLPKTIFDQMNVLPVTDIVKGA--KSASLK 1062

Query: 228  SKSTPQGIWTKALTKADPALESIYQRGKIFSNTIKNNAFIE 268
             K   Q I  K     DP    +YQ  + F  + K+    +
Sbjct: 1063 IKQRVQKIKRK---NTDPYAPKVYQ-SRDFRISSKDRPDFD 1099


>gi|320538774|ref|ZP_08038452.1| hypothetical protein SSYM_0354 [Serratia symbiotica str. Tucson]
 gi|320031163|gb|EFW13164.1| hypothetical protein SSYM_0354 [Serratia symbiotica str. Tucson]
          Length = 113

 Score = 47.2 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 5/50 (10%)

Query: 43  HQVRELTQNKASTEQVIDISTKVKDVAVDVAVSMIPIYGTYREFKKGNYG 92
           H  +EL   K  T+QV        +++ +VA+SMIPIYGT REF+KGN G
Sbjct: 69  HITQELAMEKKVTDQV-----SAGEISKEVALSMIPIYGTIREFQKGNIG 113


>gi|118090700|ref|XP_001232770.1| PREDICTED: similar to TBC1 domain family, member 14 [Gallus gallus]
          Length = 675

 Score = 46.1 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 43/242 (17%), Positives = 81/242 (33%), Gaps = 22/242 (9%)

Query: 137 AAKEACTIAQATEKTAKLTALTKEGITSIRTIEGSSVTIKSESIGTKASISSTNTAEKSA 196
           A +++ T  +    T KL + T + +     I   SV+  S  + T  S+S+ +  +   
Sbjct: 106 AVRKSSTFPRTGYDTVKLYSPTSKTLNRSDDISVCSVSSLSTELSTTLSVSNEDILD-FV 164

Query: 197 ISQKITTNSTTEIGKT--TEVVEESISKINSQLSKSTPQGIWTKALTKADPALESIYQRG 254
           ++   +   T E  +   ++V   S  + N Q  +   Q     +  K      +   R 
Sbjct: 165 VTSSSSAIVTLETDEAHFSDVTLSSTKETNEQSQQDCCQETEVDSRQKILGPFTNFLARN 224

Query: 255 KIFSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSEF---------KMVPLSD 305
                T K NA  EK       +  K+P   N  +D      E+          + P  +
Sbjct: 225 LF---TRKQNARSEKQNDVGWKLFGKVPLRENSQKDPKKIQKEYEEKTGRAHRPLSPKQN 281

Query: 306 QTLFRDFQGLCGKNI---DNQFILDLNRASFIFNGKKLARDNSAEAIQKLMNQFAKNPKQ 362
                DF+ L    +   D    L    A       +  R    E + +   +  K  ++
Sbjct: 282 VRKNLDFEPLSTTALILEDRPANLPAKPAE----EAQKHRQQYEEMVVQAKKRELKEAQK 337

Query: 363 LQ 364
            +
Sbjct: 338 RK 339


>gi|284008185|emb|CBA74448.1| conserved pentapeptide repeat protein [Arsenophonus nasoniae]
          Length = 1253

 Score = 45.7 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 70/359 (19%), Positives = 115/359 (32%), Gaps = 63/359 (17%)

Query: 74  VSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGGSIALKAGTAG 133
           + +IP Y T  E +KGN G  +  A+ D +   P   + A+AA    R      +A   G
Sbjct: 615 LHLIPFYTTITEVRKGNTGQAVGAALFDVSGFFP---FLAKAAHISNRFSIAVGEAAVNG 671

Query: 134 TMIAAKEACTIAQATEKTAK---------------------------------LTALTKE 160
              A K+A T+ QA  + AK                                    L   
Sbjct: 672 LQTALKQA-TLRQALHQGAKQLLKSGIPHVTNSLPANLFAELGTAFLRSADPGFELLASG 730

Query: 161 GITSIRTIEGSSVTIKSESIGTKASISSTNTAEKSAISQKITTNSTTEIGKT-------- 212
           G+  I  ++  +   + +  G    + +    EK A    +  +   +I           
Sbjct: 731 GLKGIHALKKVAKQSQQQLSGLTQLVEA---LEKKANDFPVAHSERFKIETAYHPAQLKE 787

Query: 213 ---TEVVEESISKINSQLSKSTPQGIWTKALT--------KADPALESIYQRGKIFSNTI 261
              T++  +S   I  Q+   T Q    K L            P  E +YQ         
Sbjct: 788 VPVTKIGRQSGKDIYVQVYPETGQPFGRKYLRDTAGNLALAPVPIGERLYQLKIQGLGGK 847

Query: 262 KNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSEFKMVPLSDQTLFR-DFQGLCGKNI 320
                 +KLA  +  + +      N+ +++     E  ++ LS + L   DF  L  + I
Sbjct: 848 GAKMGAKKLAAQSNTV-QLEQISLNELKELLLIQQENTIIDLSSKNLHNIDFSTLFAEKI 906

Query: 321 DNQFILDLNRASFIFNGKKLARDNSAEAIQKLMNQFAK--NPKQLQLISSYANQSIFAD 377
           D  F+   +      N   L   N+      L        N     LIS    ++I  D
Sbjct: 907 DLTFVNFSDANLSGSNLSNLNLTNATLHKASLNGAILHRVNLNNANLISVDLYRAILND 965


>gi|326919451|ref|XP_003205994.1| PREDICTED: TBC1 domain family member 14-like [Meleagris gallopavo]
          Length = 639

 Score = 45.3 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 42/214 (19%), Positives = 75/214 (35%), Gaps = 19/214 (8%)

Query: 137 AAKEACTIAQATEKTAKLTALTKEGITSIRTIEGSSVTIKSESIGTKASISSTNTAEKSA 196
           A +++ T  +    T KL + T + +     I   SV+  S  + T  S+S+ +  +   
Sbjct: 248 AVRKSSTFPRTGYDTVKLYSPTSKTLNRSDDISVCSVSSLSTELSTTLSVSNEDILD-FM 306

Query: 197 ISQKITTNSTTEIGKT--TEVVEESISKINSQLSKSTPQGIWTKALTKADPALESIYQRG 254
           ++   +   T E  +T  ++V   S  +   Q  +   Q        K      +   R 
Sbjct: 307 VTSSSSAIVTLETDETHFSDVTLSSTKESGDQSQQGCCQEADVDTKRKILGPFTNFLARN 366

Query: 255 KIFSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSEF---------KMVPLSD 305
                T + NA +EK       +  K+P   N  +D      E+          + P  +
Sbjct: 367 LF---TRRQNARLEKQNDVGWKLFGKVPLRENSHKDPKKIQKEYEEKTGRAHRPLSPKQN 423

Query: 306 QTLFRDFQGLCGKNIDNQFILDLNRASFIFNGKK 339
                DF+ L    +    IL+   A   FNG  
Sbjct: 424 VRKNLDFEPLSTTAL----ILEDRPALAKFNGAV 453


>gi|322421809|ref|YP_004201032.1| methyl-accepting chemotaxis sensory transducer [Geobacter sp. M18]
 gi|320128196|gb|ADW15756.1| methyl-accepting chemotaxis sensory transducer [Geobacter sp. M18]
          Length = 543

 Score = 45.3 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 69/175 (39%), Gaps = 6/175 (3%)

Query: 53  ASTEQVIDISTKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPVVGYG 112
           AS+EQ+ +I + +++VA     +++ +       + G +G G      +   L       
Sbjct: 367 ASSEQIGEIVSTIEEVADQT--NLLALNAAIEAARAGEHGRGFAVVADEVRALAERTAKA 424

Query: 113 ARAAINLVRGGSIALKAGTAGTMIAAKEAC-TIAQATEKTAKLTALTKEGITSIRTIEGS 171
            R    ++R      +    G   + KEA   + +A E +  L  + +    S+  IE  
Sbjct: 425 TREIGLMIRTIQSDTELAVTGMTTSRKEADGGLLKAEEASHALALIVEASGKSMEMIEMI 484

Query: 172 SVTIKSESIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQ 226
           +   + +S  T      ++  E  A   + T ++  ++ ++  ++    S +  +
Sbjct: 485 TAATEEQSGVTAKL---SSNIETIASGTRSTESAAGQVRESARLLACLSSDLEKK 536


>gi|145547130|ref|XP_001459247.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124427071|emb|CAK91850.1| unnamed protein product [Paramecium tetraurelia]
          Length = 565

 Score = 44.1 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 40/263 (15%), Positives = 82/263 (31%), Gaps = 18/263 (6%)

Query: 160 EGITSIRTIEGSSVTIKSESIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEES 219
           + + S+         +K  +I        T +  +  I + I+ +  T+    T      
Sbjct: 219 DSLESLNIARIEDAFLKYINIKASLQFPFTTSVNEDFIEKYISEDLITDESAQTFNKVSF 278

Query: 220 ISKINSQLSKSTPQGIWTKALTKADPALESIYQRGKIFSNTIKNNAFIEKLAHTTKAIDK 279
              IN Q             + K D  ++S  +  +     IKN+   + +  +TK   K
Sbjct: 279 AKPINDQSKNQDQSTKKINKMAKDDHLIKSKRENKESTKIKIKNDNLQKFMRKSTKNNFK 338

Query: 280 KIPFIGNQWRDINTAHSEFKMVPLSDQTLFRDFQGLC-------GKNIDNQFILDLNRAS 332
           K     +   D +      K +   D  + +DF  L          N   + +    R  
Sbjct: 339 KSSQEPSSKWDQDRQLEFEKKISRLDSNIIQDFSELSHQLFNDDTNNKPKKHLQINKRKV 398

Query: 333 FI--------FNGKKL---ARDNSAEAIQKLMNQFAKNPKQLQLISSYANQSIFADSVVH 381
           +         +NGK +     +      Q    ++  + ++      Y+ +     +   
Sbjct: 399 YFDVFDSCRYYNGKLIGYKQVNPRQPFCQYSFIEYELDSEEEVAEDVYSEERSVDMTFSE 458

Query: 382 LMQSIPEFAKYASKSGSASKFTA 404
            +Q   EF +  S   +   FT 
Sbjct: 459 SLQEFIEFDQKQSFVQNEEPFTL 481


>gi|197245677|gb|AAI68625.1| Unknown (protein for IMAGE:7680666) [Xenopus (Silurana) tropicalis]
          Length = 2254

 Score = 44.1 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 84/224 (37%), Gaps = 16/224 (7%)

Query: 139  KEACTIAQATEKTAKLTALTKEGITSIRT-IEGSSVTIKSESIGTKASISSTNTAEKSAI 197
            ++   +  A++   KL  +  E + SI+  +E +  T++ + I  KA     ++ E + +
Sbjct: 1250 QQIDILESASQSGKKLNHVAMEAVESIKAELESTCETMREKEIILKALERFLSSLEATRV 1309

Query: 198  SQKITTN-------STTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADPALESI 250
            S     N       +  E  K   V+E  I  +N +  +          L   + +LE  
Sbjct: 1310 SIVAQANVWGMDKATLEEKQKNLTVLENKIFHLNQEALQLDDH------LQGVEISLEDP 1363

Query: 251  YQRGKIFSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSEFKMVPLSDQTLFR 310
               G+     +    F +K+    +A+ +++  +  +        SE  +    + TL R
Sbjct: 1364 EHGGETSCQKLI-AGFPDKVESAKQAVLQELNNLHQKVEAGAIFPSEVALPVQKEVTLAR 1422

Query: 311  DFQGLCGKNIDNQF-ILDLNRASFIFNGKKLARDNSAEAIQKLM 353
            +   L  +    Q  +L+++         + + ++     + L 
Sbjct: 1423 ESSQLSQEQTLQQITLLNMDSVLQEIKDVQSSVEDEIRKCEDLQ 1466


>gi|163800536|ref|ZP_02194437.1| inner membrane protein, putative [Vibrio sp. AND4]
 gi|159175979|gb|EDP60773.1| inner membrane protein, putative [Vibrio sp. AND4]
          Length = 1581

 Score = 43.7 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 78/211 (36%), Gaps = 34/211 (16%)

Query: 67   DVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGGSIA 126
            D A  V   ++P++ T  +F+KGNY  G +G +SD    +P+     +AA N        
Sbjct: 915  DYAKGVMQMIVPVWATVEDFQKGNYYMGSLGLLSDVGFFLPI----GKAAFN-------- 962

Query: 127  LKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEGITSIRTIEGSSVTIKSESIGTKASI 186
                  G M     + ++ +  + +           ++I  ++  S              
Sbjct: 963  -----TGKMTGKVVSHSLPKKYKVS-----------SAINVVQIGSNKRVVGETFDIDLQ 1006

Query: 187  SSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADPA 246
             +   A+++ +S   T      +   T++++ +  K  S   K   Q I  K     DP 
Sbjct: 1007 VARKQAKEAWLSLPKTVFDQMNVLPITDIIKGA--KSASLKIKQRAQKIKRK---NTDPY 1061

Query: 247  LESIYQ-RGKIFSNTIKNNAFIEKLAHTTKA 276
               +YQ R    S+  + +   +K+     A
Sbjct: 1062 APKVYQSRNFRISSKDRPDFDPDKVVGIPNA 1092


>gi|2459970|gb|AAC45937.1| PopB [Pseudomonas aeruginosa]
          Length = 392

 Score = 43.7 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 72/202 (35%), Gaps = 19/202 (9%)

Query: 61  ISTKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLV 120
           +S  V+  A D  +S        +E  +   G  ++G     ALL  VV +G  A   L 
Sbjct: 208 VSQSVQQAAADGLIS--------KEVMEK-LGPALMGIEIAVALLAAVVSFGGSAVGGLA 258

Query: 121 RGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEGITSIRTIE-GSSVTIKSES 179
           R G         G   A   A   ++  +   K  +L   G +   +++ G  V+  +  
Sbjct: 259 RLG------AKIGGKAAEMTASLASKVADLGGKFGSLA--GQSLSHSLKLGVQVSDLTLD 310

Query: 180 IGTKASISSTNTAE-KSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTK 238
           +   A+ ++ +  + K+A  Q     S  ++     V+E    +++        Q I  +
Sbjct: 311 VANGAAQATHSGFQAKAANRQADVQESRADLTTLQGVIERLKEELSRMCMLEAFQEIMER 370

Query: 239 ALTKADPALESIYQRGKIFSNT 260
                    E+++      +  
Sbjct: 371 IFAMLQAKGETLHNLSSRPAAI 392


>gi|119773672|ref|YP_926412.1| putative methyl-accepting chemotaxis sensory transducer [Shewanella
           amazonensis SB2B]
 gi|119766172|gb|ABL98742.1| methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
           [Shewanella amazonensis SB2B]
          Length = 523

 Score = 43.7 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 80/203 (39%), Gaps = 18/203 (8%)

Query: 45  VRELTQNKASTEQVIDISTKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAAL 104
           VRE+  +  +  QV+++   +  +A     +++ +       + G  G G      +   
Sbjct: 336 VREIASDSQAINQVLEV---IGTIAEQT--NLLALNAAIEAARAGESGRGFAVVADEVRQ 390

Query: 105 LIPVVGYGARAAINLVRGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEGITS 164
           L    G        +VR    +     A    + ++  T+A      A+L  +      +
Sbjct: 391 LSGRTGESTGQIEGIVRKFQSSTARAEANLDNSQQQLKTLA------ARLGQV----QQA 440

Query: 165 IRTIEGSSVTIKSESIGTKASISSTNTAEKSAISQKITTNSTTE-IGKTTEVVEESISKI 223
              +EG+  TIKS S  +  +++  ++A  S      T N   E +   +   E+  +++
Sbjct: 441 FGALEGAINTIKSLSDHSAHAMTEQSSAAGSISDSLQTINELAEAVLNQSREAEQLGARM 500

Query: 224 NSQLSKST--PQGIWTKALTKAD 244
           +   SK++   +  W K+++  D
Sbjct: 501 SRLSSKTSGLSKQFWQKSVSGRD 523


>gi|29839784|ref|NP_828890.1| hypothetical protein CCA00015 [Chlamydophila caviae GPIC]
 gi|29834131|gb|AAP04768.1| conserved hypothetical protein [Chlamydophila caviae GPIC]
          Length = 636

 Score = 43.4 bits (100), Expect = 0.073,   Method: Composition-based stats.
 Identities = 42/244 (17%), Positives = 87/244 (35%), Gaps = 14/244 (5%)

Query: 57  QVIDISTKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAA 116
           QV D+ST++     +    +  I  T ++  +G  G   +     A      +  GA  A
Sbjct: 380 QVTDLSTQINPADAEATAQLQEIQQTIQDALQGTAGQDGMINALGAITTAASISTGAPIA 439

Query: 117 INLVRGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTA---LTKEGITSIRTIEGSSV 173
               +GGS   +    G+  A+ ++   + +    A  +     ++   ++   ++ +S 
Sbjct: 440 SA-NQGGSAVKQLYKTGSTAASSKSYADSLSAGYGAYQSLNDVYSRSSASNREVLDRTST 498

Query: 174 TIKSESIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEV--------VEESISKINS 225
              ++++    +    N       ++ I  NS T       V        V ++  + N 
Sbjct: 499 PALTQTVSRTETRPRDNDNAAQRFARTIAANSNTLGDVYASVGVLQTLLGVLQNNPQANE 558

Query: 226 QLSKSTPQGIWTKALTKADPALESIYQRGKIFSNTIKNN--AFIEKLAHTTKAIDKKIPF 283
           +  K       TKA     P ++      K F   ++N      ++LA   +A  +K P 
Sbjct: 559 EEIKQKLTSEVTKAPQSGYPHVQLSNDSTKKFIAQLENEFVQGSKRLAEAKEAAFEKQPL 618

Query: 284 IGNQ 287
              Q
Sbjct: 619 FIQQ 622


>gi|322376065|ref|ZP_08050575.1| beta-N-acetylhexosaminidase [Streptococcus sp. C300]
 gi|321279015|gb|EFX56058.1| beta-N-acetylhexosaminidase [Streptococcus sp. C300]
          Length = 1343

 Score = 43.4 bits (100), Expect = 0.078,   Method: Composition-based stats.
 Identities = 55/306 (17%), Positives = 104/306 (33%), Gaps = 29/306 (9%)

Query: 157 LTKEGITSIRTIEGSSVTIKSESIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVV 216
           ++ +GIT   T E +  TI+      K ++ S    +    + K       E  +    V
Sbjct: 32  VSADGITPAPTAEETVQTIQESPQAVKEAVDSKVPEKLEEKADKPVKEEVKEDQEVPRTV 91

Query: 217 ----EESISKINSQLSKSTPQGIWTKALTKADPALESIYQRGKIFSNTIKNNAFIEKLAH 272
               EES + + ++ +  TP            PA  +  ++              E+ A 
Sbjct: 92  TPKTEESSAPVVTENATPTPTAEKESPAPAETPAESTPSEKKNEAVTPAVATPSTERAAQ 151

Query: 273 TTKAIDKKIPFIGNQWRDINTAHSEFKMVPLSDQTLFRDFQGLCGKNIDNQFILDLNRAS 332
             + + K+     +  R   +     +++  +    + D   L G +   +F+LD    +
Sbjct: 152 VNEKLAKRKMISIDAGRKYFSPDQLKEIIDKAKHYGYTDLHLLVGND-GMRFMLD--DMT 208

Query: 333 FIFNGKKLARDNSAEAIQKLMNQFAKNP--------KQLQLISSYANQSI---------- 374
              NGK  A D+   A++   + + K+P        +   LI+   N+ I          
Sbjct: 209 IKANGKTYASDDVKRALENGTDAYYKDPNGNHLTESQMTDLINYAKNKGIGLIPTVNSPG 268

Query: 375 FADSVVHLMQSI----PEFAKYASKSGSASKFTAKTLTNGEVAFTAKYTTKVQAVDKIAG 430
             D+++H M+ +    P F  +  +S        K       A   KY         I  
Sbjct: 269 HMDAILHAMKELGIQKPNFNYFGKESARTVDLDNKEAVAFTKALIEKYAAYFAGKSDIFN 328

Query: 431 KPLKEY 436
             L EY
Sbjct: 329 IGLDEY 334


>gi|291224765|ref|XP_002732373.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
          Length = 894

 Score = 43.4 bits (100), Expect = 0.081,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 71/185 (38%), Gaps = 14/185 (7%)

Query: 142 CTIAQATEKTAKLTALTKEGITSIRTIEG--SSVTIKSESIGTKASISSTNTAEKSAISQ 199
             +  +T+K  +L+  TK  +  +  +EG   S       I  K  I+ + T + +   +
Sbjct: 460 TRVTNSTDKETQLSQNTKSKV--VNNVEGVIESYNKVDMKIPGKKDINKSATEDYNIADK 517

Query: 200 KITTNSTTEIGKTT-EVVEESISKINSQLSKSTPQGIWTKALTKADPALESIYQRGKIFS 258
             + N    + + +   VE    K + Q +++  +  +   +          Y+  ++ +
Sbjct: 518 DTSKNVDNLMNEQSLTSVEVDDVKGSLQTTQTRVKKRYLLPVHHFGSGPNFNYEHFRMAA 577

Query: 259 --NTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSEFKMVPLSDQTLFRDFQGLC 316
                 N + +EK  HT            N+W+ +N    E+++  L D     DF+  C
Sbjct: 578 VYAMYTNRSLVEKWFHTHYT-------SRNEWKPLNETFDEYELRRLLDLVYIDDFKRDC 630

Query: 317 GKNID 321
              +D
Sbjct: 631 NNTVD 635


>gi|306826239|ref|ZP_07459573.1| beta-N-acetylhexosaminidase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304431515|gb|EFM34497.1| beta-N-acetylhexosaminidase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 1343

 Score = 43.0 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 54/306 (17%), Positives = 104/306 (33%), Gaps = 29/306 (9%)

Query: 157 LTKEGITSIRTIEGSSVTIKSESIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVV 216
           ++ +GIT   T E +  TI+      K ++ S    +    + K       E  +    V
Sbjct: 32  VSADGITPAPTAEETVQTIQESPQAVKEAVDSKVPEKLEEKAGKPVKEEVKEDKEAPRTV 91

Query: 217 ----EESISKINSQLSKSTPQGIWTKALTKADPALESIYQRGKIFSNTIKNNAFIEKLAH 272
               EES + + ++ +  TP            PA  +  ++             +E+   
Sbjct: 92  APKTEESSAPVVTENASPTPTAEKESPAPAETPAESTPSEKKNEAVTPAVATPSMERATQ 151

Query: 273 TTKAIDKKIPFIGNQWRDINTAHSEFKMVPLSDQTLFRDFQGLCGKNIDNQFILDLNRAS 332
             + + K+     +  R   +     +++  +    + D   L G +   +F+LD    +
Sbjct: 152 VNEKLAKRKMISIDAGRKYFSPDQLKEIIDKAKHYGYTDLHLLVGND-GMRFMLD--DMT 208

Query: 333 FIFNGKKLARDNSAEAIQKLMNQFAKNP--------KQLQLISSYANQSI---------- 374
              NGK  A D+   A++   + + K+P        +   LI+   N+ I          
Sbjct: 209 IKANGKTYASDDVKRALENGTDAYYKDPNGNYLTESQMTDLINYAKNKGIGLIPTVNSPG 268

Query: 375 FADSVVHLMQSI----PEFAKYASKSGSASKFTAKTLTNGEVAFTAKYTTKVQAVDKIAG 430
             D+++H M+ +    P F  +  +S        K       A   KY         I  
Sbjct: 269 HMDAILHAMKELGIQKPNFNYFGKESARTVDLDNKEAVAFTKALIDKYAAYFAGKSDIFN 328

Query: 431 KPLKEY 436
             L EY
Sbjct: 329 IGLDEY 334


>gi|312963607|ref|ZP_07778088.1| type IV pilus biogenesis protein PilJ [Pseudomonas fluorescens WH6]
 gi|311282116|gb|EFQ60716.1| type IV pilus biogenesis protein PilJ [Pseudomonas fluorescens WH6]
          Length = 683

 Score = 43.0 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 80/194 (41%), Gaps = 21/194 (10%)

Query: 45  VRELTQNKA--------STEQVIDISTKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGIV 96
           +RE  Q+ A        S++++ DI + + D+A     +++ +    +    G+ G G  
Sbjct: 484 IREQIQDTAKRIKRLGESSQEIGDIVSLIDDIAEQT--NILALNAAIQASMAGDAGRGFA 541

Query: 97  GAISDAALLIPVVGYGARAAINLVRGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTA 156
               +   L        R    LVR    A++A T   +I      ++ Q T +  +   
Sbjct: 542 VVADEVQRLAERSSAATRQIETLVR----AIQADTNEAVI------SMEQTTTEVVRGAR 591

Query: 157 LTKEGITSIRTIEGSSVTIKSE-SIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEV 215
           L ++   ++  IEG S T+ +     + A+   T++A + +++  +    TT+    +  
Sbjct: 592 LAQDAGVALEEIEGVSKTLAALIQSISNAAQQQTSSAGQISLTMNVIQQITTQTSSGSTA 651

Query: 216 VEESISKINSQLSK 229
             ESI  +    S+
Sbjct: 652 TAESIGNLAKMASQ 665


>gi|301608374|ref|XP_002933763.1| PREDICTED: nesprin-2 [Xenopus (Silurana) tropicalis]
          Length = 3468

 Score = 43.0 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 84/224 (37%), Gaps = 16/224 (7%)

Query: 139  KEACTIAQATEKTAKLTALTKEGITSIRT-IEGSSVTIKSESIGTKASISSTNTAEKSAI 197
            ++   +  A++   KL  +  E + SI+  +E +  T++ + I  KA     ++ E + +
Sbjct: 1250 QQIDILESASQSGKKLNHVAMEAVESIKAELESTCETMREKEIILKALERFLSSLEATRV 1309

Query: 198  SQKITTN-------STTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADPALESI 250
            S     N       +  E  K   V+E  I  +N +  +          L   + +LE  
Sbjct: 1310 SIVAQANVWGMDKATLEEKQKNLTVLENKIFHLNQEALQLDDH------LQGVEISLEEP 1363

Query: 251  YQRGKIFSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSEFKMVPLSDQTLFR 310
               G+     +    F +K+    +A+ +++  +  +        +E  +    + TL R
Sbjct: 1364 EHGGETSCQKLI-AGFPDKVESAKQAVLQELNNLHQKVEAGAIFPAEVALPVQKEVTLAR 1422

Query: 311  DFQGLCGKNIDNQF-ILDLNRASFIFNGKKLARDNSAEAIQKLM 353
            +   L  +    Q  +L+++         + + ++     + L 
Sbjct: 1423 ESSQLSQEQTLQQITLLNMDSVLQEIKDVQSSVEDEIRKCEDLQ 1466


>gi|15640839|ref|NP_230470.1| inner membrane protein, putative [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|9655272|gb|AAF93985.1| inner membrane protein, putative [Vibrio cholerae O1 biovar El Tor
           str. N16961]
          Length = 1112

 Score = 42.6 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 26/44 (59%)

Query: 66  KDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPVV 109
           +D+A  V ++++P++GT  + K G+ G   +G + D    +P+ 
Sbjct: 545 RDIAYQVLMAILPVWGTVEDIKSGDAGMATLGVLGDVMFFLPIA 588


>gi|13377544|gb|AAK20779.1|AF325734_5 putative inner membrane protein [Vibrio cholerae]
 gi|3004928|gb|AAC12276.1| putative inner membrane protein [Vibrio cholerae]
          Length = 1111

 Score = 42.6 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 26/44 (59%)

Query: 66  KDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPVV 109
           +D+A  V ++++P++GT  + K G+ G   +G + D    +P+ 
Sbjct: 544 RDIAYQVLMAILPVWGTVEDIKSGDAGMATLGVLGDVMFFLPIA 587


>gi|147673479|ref|YP_001216303.1| putative inner membrane protein [Vibrio cholerae O395]
 gi|13377513|gb|AAK20749.1|AF325733_5 unknown [Vibrio cholerae]
 gi|146315362|gb|ABQ19901.1| putative inner membrane protein [Vibrio cholerae O395]
          Length = 962

 Score = 42.6 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 26/44 (59%)

Query: 66  KDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPVV 109
           +D+A  V ++++P++GT  + K G+ G   +G + D    +P+ 
Sbjct: 395 RDIAYQVLMAILPVWGTVEDIKSGDAGMATLGVLGDVMFFLPIA 438


>gi|73983496|ref|XP_540777.2| PREDICTED: similar to Mucin-5B precursor (Mucin 5 subtype B,
            tracheobronchial) (High molecular weight salivary mucin
            MG1) (Sublingual gland mucin) [Canis familiaris]
          Length = 4944

 Score = 42.6 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 67/164 (40%), Gaps = 8/164 (4%)

Query: 122  GGSIALKAGTAGTMIAA-KEACTIAQATEKTAKLTALTKEGITSIRTIEGSSVTIKSESI 180
            G +  +   T  T  ++      +  +T +T   +  T +G+T+  T   +S T     I
Sbjct: 2553 GTTEGITVSTTQTGPSSPGTTKKVTVSTIQTVPSSPETTQGVTASTTQTAASST----GI 2608

Query: 181  GTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTP--QGIWTK 238
              +  +S+T T+  S  + +  T STT+ G ++    E ++   +Q   S+P      T 
Sbjct: 2609 TKRVLVSTTQTSPSSLRTSQGVTTSTTQTGPSSSGTTEKVTVSTTQTVPSSPGTTQEVTV 2668

Query: 239  ALTKADPALESIYQRGKIFSNTIKNNAFIEKLAHTTKAIDKKIP 282
            + T   P+   I +R  + S T    +        T +  + +P
Sbjct: 2669 STTHTGPSSPQITKR-VLISTTETGPSSPGTSQRITASTTQTVP 2711



 Score = 39.9 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 56/138 (40%), Gaps = 4/138 (2%)

Query: 140  EACTIAQATEKTAKLTALTKEGITSIRTIEGSSVTIKSESIGTKASISSTNTAEKSAISQ 199
             +  +  +T +T   +A+T +G+T+  T  G S    S+ +      S+T     SA++ 
Sbjct: 2187 TSQGVTASTIQTGPSSAVTSQGVTTSTTQTGPSSPATSQRLTA----STTQIGPSSAVTS 2242

Query: 200  KITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADPALESIYQRGKIFSN 259
            +  T STT+ G ++    + ++   +Q   S+P       ++       S     ++  +
Sbjct: 2243 QGVTTSTTQTGPSSPGTSQGVTASTTQTGPSSPATSHRLTVSTTQIGPSSPGTSQRVSES 2302

Query: 260  TIKNNAFIEKLAHTTKAI 277
            T +      +      ++
Sbjct: 2303 TTQTLPTPARTTERVSSL 2320



 Score = 39.9 bits (91), Expect = 1.00,   Method: Composition-based stats.
 Identities = 33/212 (15%), Positives = 74/212 (34%), Gaps = 23/212 (10%)

Query: 114  RAAINLVRGGSIALKAGTAGTMIAAKEACTIAQATEK---TAKLTALTKEGITSIRTIEG 170
            +A ++ ++ G  +       T+   +   +  Q T++   +   T  +  G +   T   
Sbjct: 3608 KATVSTIQTGPSSTGTSQGITVSTTQTGPSSPQITKRVLISTTQTVPSSPGTSQRLTAST 3667

Query: 171  SSVTIKSESIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKS 230
            +     S     KA++S+  T   S  + +  T STT+ G ++ V  + I+   +Q   S
Sbjct: 3668 TQTGPSSPGTTEKATVSTIQTGPSSPGTSQRLTASTTQTGPSSPVTSQGITVSTTQTGPS 3727

Query: 231  TPQ--GIWTKALTKADPALESIYQRGKIF-----------------SNTIKNNAFIEKLA 271
            +PQ       + T+  P+     Q   +                  S T    +      
Sbjct: 3728 SPQITKRVLISTTQIVPSSPGTSQGVTVSTIQTGPSSPGTSQRLTASTTQIGPSSPGTSQ 3787

Query: 272  HTTKAIDKKIPFIGNQWRDINTA-HSEFKMVP 302
              +++  + +P        +++   S    +P
Sbjct: 3788 RVSESTTQTLPTPARTTERVSSLSPSASPRLP 3819


>gi|121585705|ref|ZP_01675500.1| hypothetical protein VC274080_0898 [Vibrio cholerae 2740-80]
 gi|153818047|ref|ZP_01970714.1| hypothetical protein A5C_0837 [Vibrio cholerae NCTC 8457]
 gi|153822035|ref|ZP_01974702.1| hypothetical protein A5E_0912 [Vibrio cholerae B33]
 gi|227080999|ref|YP_002809550.1| hypothetical protein VCM66_0779 [Vibrio cholerae M66-2]
 gi|229505566|ref|ZP_04395076.1| hypothetical protein VCF_000777 [Vibrio cholerae BX 330286]
 gi|229510762|ref|ZP_04400241.1| hypothetical protein VCE_002169 [Vibrio cholerae B33]
 gi|229517883|ref|ZP_04407327.1| hypothetical protein VCC_001907 [Vibrio cholerae RC9]
 gi|229608586|ref|YP_002879234.1| hypothetical protein VCD_003506 [Vibrio cholerae MJ-1236]
 gi|254847958|ref|ZP_05237308.1| inner membrane protein [Vibrio cholerae MO10]
 gi|255744622|ref|ZP_05418573.1| beta/gamma crystallin domain-containing protein [Vibrio cholera CIRS
            101]
 gi|262161246|ref|ZP_06030357.1| beta/gamma crystallin domain-containing protein [Vibrio cholerae
            INDRE 91/1]
 gi|298499049|ref|ZP_07008856.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|121550068|gb|EAX60084.1| hypothetical protein VC274080_0898 [Vibrio cholerae 2740-80]
 gi|126511393|gb|EAZ73987.1| hypothetical protein A5C_0837 [Vibrio cholerae NCTC 8457]
 gi|126520429|gb|EAZ77652.1| hypothetical protein A5E_0912 [Vibrio cholerae B33]
 gi|227008887|gb|ACP05099.1| hypothetical protein VCM66_0779 [Vibrio cholerae M66-2]
 gi|229344598|gb|EEO09572.1| hypothetical protein VCC_001907 [Vibrio cholerae RC9]
 gi|229350727|gb|EEO15668.1| hypothetical protein VCE_002169 [Vibrio cholerae B33]
 gi|229357789|gb|EEO22706.1| hypothetical protein VCF_000777 [Vibrio cholerae BX 330286]
 gi|229371241|gb|ACQ61664.1| hypothetical protein VCD_003506 [Vibrio cholerae MJ-1236]
 gi|254843663|gb|EET22077.1| inner membrane protein [Vibrio cholerae MO10]
 gi|255737653|gb|EET93047.1| beta/gamma crystallin domain-containing protein [Vibrio cholera CIRS
            101]
 gi|262028996|gb|EEY47649.1| beta/gamma crystallin domain-containing protein [Vibrio cholerae
            INDRE 91/1]
 gi|297543382|gb|EFH79432.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
          Length = 1533

 Score = 42.6 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 26/44 (59%)

Query: 66   KDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPVV 109
            +D+A  V ++++P++GT  + K G+ G   +G + D    +P+ 
Sbjct: 966  RDIAYQVLMAILPVWGTVEDIKSGDAGMATLGVLGDVMFFLPIA 1009


>gi|254225070|ref|ZP_04918684.1| hypothetical protein VCV51_0554 [Vibrio cholerae V51]
 gi|125622457|gb|EAZ50777.1| hypothetical protein VCV51_0554 [Vibrio cholerae V51]
          Length = 1328

 Score = 42.6 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 26/44 (59%)

Query: 66   KDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPVV 109
            +D+A  V ++++P++GT  + K G+ G   +G + D    +P+ 
Sbjct: 963  RDIAYQVLMAILPVWGTVEDIKSGDAGMATLGVLGDVMFFLPIA 1006


>gi|121725976|ref|ZP_01679275.1| hypothetical protein VCV52_0783 [Vibrio cholerae V52]
 gi|121631458|gb|EAX63828.1| hypothetical protein VCV52_0783 [Vibrio cholerae V52]
          Length = 1533

 Score = 42.6 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 26/44 (59%)

Query: 66   KDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPVV 109
            +D+A  V ++++P++GT  + K G+ G   +G + D    +P+ 
Sbjct: 966  RDIAYQVLMAILPVWGTVEDIKSGDAGMATLGVLGDVMFFLPIA 1009


>gi|154323071|ref|XP_001560850.1| hypothetical protein BC1G_00878 [Botryotinia fuckeliana B05.10]
 gi|150848212|gb|EDN23405.1| hypothetical protein BC1G_00878 [Botryotinia fuckeliana B05.10]
          Length = 510

 Score = 42.6 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 61/171 (35%), Gaps = 18/171 (10%)

Query: 113 ARAAINLVRGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEGITSIRTIEGSS 172
           A   I+LV   + A+     GT +A          TE T       +    +   +  S 
Sbjct: 9   AAVTISLVSMANAAISISKTGTTVAVNGISYYDAFTEGT------IENSDGTFSILSASI 62

Query: 173 VTIKSESIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTP 232
             ++S +IG  + +  T TAEK     ++       +    +V     S  N    +  P
Sbjct: 63  PGVQSSTIGVPSRLYYTKTAEKPLAGVRLG------VKDIYDVAGIKTSNGNRAYYELYP 116

Query: 233 QGIWTKALTKADPALESIYQRGKIFSNTIKNNAFIEKLAHTTKAIDKKIPF 283
              +T       PA++S+   G I    +K + F    + T   +D   PF
Sbjct: 117 PANFT------GPAVQSLIDAGAIIVGKMKTSQFANGESPTADWVDYHCPF 161


>gi|153820579|ref|ZP_01973246.1| inner membrane protein, putative [Vibrio cholerae NCTC 8457]
 gi|126508877|gb|EAZ71471.1| inner membrane protein, putative [Vibrio cholerae NCTC 8457]
          Length = 300

 Score = 42.2 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 26/44 (59%)

Query: 66  KDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPVV 109
           +D+A  V ++++P++GT  + K G+ G   +G + D    +P+ 
Sbjct: 192 RDIAYQVLMAILPVWGTVEDIKSGDAGMATLGVLGDVMFFLPIA 235


>gi|229593120|ref|YP_002875239.1| type IV pilus biogenesis protein/twitching mobility protein/methyl
           accepting chemotaxis-like protein [Pseudomonas
           fluorescens SBW25]
 gi|229364986|emb|CAY53120.1| type IV pilus biogenesis protein/tiwtiching mobility protein/methyl
           accepting chemotaxis-related protein [Pseudomonas
           fluorescens SBW25]
          Length = 683

 Score = 42.2 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 80/194 (41%), Gaps = 21/194 (10%)

Query: 45  VRELTQNKA--------STEQVIDISTKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGIV 96
           +RE  Q+ A        S++++ DI + + D+A     +++ +    +    G+ G G  
Sbjct: 484 IREQIQDTAKRIKRLGESSQEIGDIVSLIDDIADQT--NILALNAAIQASMAGDAGRGFA 541

Query: 97  GAISDAALLIPVVGYGARAAINLVRGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTA 156
               +   L        R    LVR    A++A T   +I      ++ Q T +  +   
Sbjct: 542 VVADEVQRLAERSSAATRQIETLVR----AIQADTNEAVI------SMEQTTTEVVRGAR 591

Query: 157 LTKEGITSIRTIEGSSVTIKSE-SIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEV 215
           L ++   ++  IEG S T+ +     + A+   T++A + +++  +    TT+    +  
Sbjct: 592 LAQDAGVALEEIEGVSKTLAALIQSISNAAQQQTSSAGQISLTMNVIQQITTQTSSGSTA 651

Query: 216 VEESISKINSQLSK 229
             ESI  +    S+
Sbjct: 652 TAESIGNLAKMASQ 665


>gi|307702857|ref|ZP_07639805.1| beta-N-acetylhexosaminidase [Streptococcus oralis ATCC 35037]
 gi|307623537|gb|EFO02526.1| beta-N-acetylhexosaminidase [Streptococcus oralis ATCC 35037]
          Length = 910

 Score = 42.2 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 56/306 (18%), Positives = 103/306 (33%), Gaps = 29/306 (9%)

Query: 157 LTKEGITSIRTIEGSSVTIKSESIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVV 216
           ++ +GIT   T E +  TI+      K ++ S    +    + K       E  +    V
Sbjct: 32  VSADGITPAPTAEETVQTIQESPQAVKETVDSKVPEKLEEKADKPVKEEVKEDQEAPRTV 91

Query: 217 EESISKINSQLSKSTPQGIWTKALTKADPA---LESIYQRGKIFSNTIKNNA-FIEKLAH 272
             +  + ++ +         T       PA    ES     K  + T        E+ A 
Sbjct: 92  APTTEESSAPVVTENATPTPTAEKESPAPAETPAESTSSEKKNEAVTPAVATPSTERAAQ 151

Query: 273 TTKAIDKKIPFIGNQWRDINTAHSEFKMVPLSDQTLFRDFQGLCGKNIDNQFILDLNRAS 332
             + + K+     +  R   +     +++  +    + D   L G +   +F+LD    +
Sbjct: 152 VNEKLAKRKMISIDAGRKYFSPDQLKEIIDKAKHYGYTDLHLLVGND-GMRFMLD--DMT 208

Query: 333 FIFNGKKLARDNSAEAIQKLMNQFAKNP--------KQLQLISSYANQSI---------- 374
              NGK  A D+   A++   + + K+P        +   LI+   N+ I          
Sbjct: 209 ITANGKTYASDDVKRALENGTDAYYKDPNGNHLTESQMTDLINYAKNKGIGLIPTVNSPG 268

Query: 375 FADSVVHLMQSI----PEFAKYASKSGSASKFTAKTLTNGEVAFTAKYTTKVQAVDKIAG 430
             D+++H M+ +    P F  +  +S        K       A   KY T       I  
Sbjct: 269 HMDAILHAMKELGIQKPNFNYFGKESARTVDLDNKEAVAFTKALIDKYATYFAGKTDIFN 328

Query: 431 KPLKEY 436
             L EY
Sbjct: 329 IGLDEY 334


>gi|326668004|ref|XP_002662132.2| PREDICTED: hypothetical protein LOC116993 [Danio rerio]
          Length = 5131

 Score = 42.2 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 41/192 (21%), Positives = 76/192 (39%), Gaps = 5/192 (2%)

Query: 126  ALKAGTAGTMIAAKEACTIAQ-ATEKTAKLTALTKEGITSIRTIEGSSVT---IKSESIG 181
            ++K  ++    A+    T    +T ++   T  +K+  ++IRT      T     + +  
Sbjct: 2283 SIKPASSLMSTASITKVTFTSLSTGESTGQTVTSKDTASTIRTFTNQGSTPFTATTAATV 2342

Query: 182  TKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALT 241
             K    ST  +E + I    T  STT+ G    +  ES         K+TP+ + T + +
Sbjct: 2343 MKDEEVSTKPSESTIIDDLETQFSTTQTGDLDNISSESTITSTMTSDKTTPKDVLTLSFS 2402

Query: 242  KADPALESIYQRGKIF-SNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSEFKM 300
             + P+ ES     +     T K+      L +TT   DK +  +       ++  +    
Sbjct: 2403 SSFPSTESETSGDETSEKTTAKDLVSPISLLYTTSRSDKDLTKLTETISVSSSTDAAVTS 2462

Query: 301  VPLSDQTLFRDF 312
               S++T  RDF
Sbjct: 2463 TKSSEKTTARDF 2474



 Score = 38.4 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 39/192 (20%), Positives = 77/192 (40%), Gaps = 5/192 (2%)

Query: 126  ALKAGTAGTMIAAKEACTIAQ-ATEKTAKLTALTKEGITSIRTIEGSSVTIKSESIGTKA 184
            ++K  ++    A+    T    +T ++   T  ++   +++RT+   S T  + +     
Sbjct: 3397 SIKPASSLMSTASITKPTFTSLSTGESTGQTVTSQATASTVRTVTNQSSTPFTATTAATV 3456

Query: 185  S---ISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALT 241
                  ST  +E + I       STT+ G   E+  ES         K+T + + + +L+
Sbjct: 3457 MQYEEVSTKPSESTVIDDLERQFSTTQTGHLDEISSESTVTTTMTSDKTTTKNVLSSSLS 3516

Query: 242  KADPALESIYQRGKIF-SNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSEFKM 300
             + P+ ES     +     T+K+      L HTT   DK++          ++  +    
Sbjct: 3517 SSFPSTESEALGDETSEKTTVKDLLSPTSLMHTTSRSDKELTKPTETISVSSSTDAAVTS 3576

Query: 301  VPLSDQTLFRDF 312
               S++T  RDF
Sbjct: 3577 TKSSEKTTARDF 3588


>gi|118593825|ref|ZP_01551189.1| hypothetical protein SIAM614_00205 [Stappia aggregata IAM 12614]
 gi|118433567|gb|EAV40233.1| hypothetical protein SIAM614_00205 [Stappia aggregata IAM 12614]
          Length = 1057

 Score = 41.8 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 6/166 (3%)

Query: 99  ISDAALLIPVVGYGARAAINLVRGGSIALKAG---TAGTMIAAKEACTIAQATEKTAKLT 155
           +++++L +   G  A   + L RG S  + +G   TAGT+  A  + T+ Q  E T +  
Sbjct: 298 LANSSLTVGQDGSLAAGGLALERGASADVSSGGAVTAGTVSLANSSLTVGQ--EGTVETD 355

Query: 156 ALTKEGITSIRTIEGSSVTIKSESIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEV 215
           AL+ E  ++     G +VT  + S+   +S++          +  +   +T ++     V
Sbjct: 356 ALSLEQGSTADVSSGGAVTAGTVSL-ANSSLTVGQEGTVETDALSLEQGATADVSSGGAV 414

Query: 216 VEESISKINSQLSKSTPQGIWTKALTKADPALESIYQRGKIFSNTI 261
              ++S  NS L+     G+ T  +        +I   G+I S T+
Sbjct: 415 TAGTVSLANSSLTVGQDGGLDTIEVLAEQGGTITISNGGEIRSETV 460


>gi|70733109|ref|YP_262882.1| type IV pilus biogenesis protein PilJ [Pseudomonas fluorescens
           Pf-5]
 gi|68347408|gb|AAY95014.1| type IV pilus biogenesis protein PilJ [Pseudomonas fluorescens
           Pf-5]
          Length = 687

 Score = 41.4 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 83/212 (39%), Gaps = 23/212 (10%)

Query: 45  VRELTQNKA--------STEQVIDISTKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGIV 96
           +RE  Q+ A        S++++ DI + + D+A     +++ +    +    G+ G G  
Sbjct: 484 IREQIQDTAKRIKRLGESSQEIGDIVSLIDDIADQT--NILALNAAIQASMAGDAGRGFA 541

Query: 97  GAISDAALLIPVVGYGARAAINLVRGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTA 156
               +   L        R    LVR    A++  T   +I      ++ Q T +  +   
Sbjct: 542 VVADEVQRLAERSSAATRQIETLVR----AIQTDTNEAVI------SMEQTTTEVVRGAR 591

Query: 157 LTKEGITSIRTIEGSSVTIKSE-SIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEV 215
           L ++   ++  IEG S T+ +     + A+   T++A + +++  +    T++    +  
Sbjct: 592 LAQDAGVALEEIEGVSKTLAALIQSISNAAQQQTSSAGQISLTMNVIQQITSQTSSGSTA 651

Query: 216 VEESISKINSQLS--KSTPQGIWTKALTKADP 245
             ESI  +    S  + +  G    A     P
Sbjct: 652 TAESIGNLAKMASQLRRSVSGFTLPATRGPAP 683


>gi|331265484|ref|YP_004325114.1| cell wall surface anchor family protein,beta-N-acetylhexosaminidase
           [Streptococcus oralis Uo5]
 gi|326682156|emb|CBY99772.1| cell wall surface anchor family protein,beta-N-acetylhexosaminidase
           [Streptococcus oralis Uo5]
          Length = 1343

 Score = 41.4 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 54/306 (17%), Positives = 104/306 (33%), Gaps = 29/306 (9%)

Query: 157 LTKEGITSIRTIEGSSVTIKSESIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVV 216
           ++ +GIT   T E +  TI+      K ++ S    +    + +       E  +    V
Sbjct: 32  VSADGITPAPTAEETVQTIQESPQAVKETVDSKVPEKLEEKADEPVKEEVKEDQEAPRTV 91

Query: 217 ----EESISKINSQLSKSTPQGIWTKALTKADPALESIYQRGKIFSNTIKNNAFIEKLAH 272
               EES + + ++ +  TP            PA  +  ++              E+ A 
Sbjct: 92  APKTEESSAPVVTENAAPTPTAEKESPAPAKTPAESTSSEKKNEAVTPAVATPSTERAAQ 151

Query: 273 TTKAIDKKIPFIGNQWRDINTAHSEFKMVPLSDQTLFRDFQGLCGKNIDNQFILDLNRAS 332
             + + K+     +  R   +     +++  +    + D   L G +   +F+LD    +
Sbjct: 152 VNEKLAKRKMISIDAGRKYFSPEQLKEIIDKAKHYGYTDLHLLVGND-GMRFMLD--DMT 208

Query: 333 FIFNGKKLARDNSAEAIQKLMNQFAKNP--------KQLQLISSYANQSI---------- 374
              NGK  A D+   A++   + + K+P        +   LI+   N+ I          
Sbjct: 209 IKANGKTYASDDVKRALENGTDAYYKDPNGNHLTESQMTDLINYAKNKGIGLIPTVNSPG 268

Query: 375 FADSVVHLMQSI----PEFAKYASKSGSASKFTAKTLTNGEVAFTAKYTTKVQAVDKIAG 430
             D+++H M+ +    P F  +  +S        K       A   KY         I  
Sbjct: 269 HMDAILHAMKELGIQKPNFNYFGKESARTVDLDNKEAVAFTKALIDKYAAYFAGKTDIFN 328

Query: 431 KPLKEY 436
             L EY
Sbjct: 329 IGLDEY 334


>gi|260824625|ref|XP_002607268.1| hypothetical protein BRAFLDRAFT_125174 [Branchiostoma floridae]
 gi|229292614|gb|EEN63278.1| hypothetical protein BRAFLDRAFT_125174 [Branchiostoma floridae]
          Length = 2643

 Score = 41.4 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 72/191 (37%), Gaps = 7/191 (3%)

Query: 107  PVVGYGARAAINLVRGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEGITSIR 166
             V G+G    I +     I+ K    G  I A  A     +   + KL     +  T+  
Sbjct: 2282 GVRGFGVYGDIAI---DDISFKTVPCGIAIHATTAVPEQSSQSGSTKLVPTASKTSTTDI 2338

Query: 167  TIEGSSVTIKSESIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQ 226
            T    +   +S + G K S ++T  A  S+     T  STTE+  T+E   +  +   S+
Sbjct: 2339 TTATYNTAQESTTDGAKTSEATTKPAPTSSEPLTTTHESTTEVATTSEATTQKPAPTASE 2398

Query: 227  LSKSTPQGIWTKALTKADPALESIYQRGKIFSNTIKNNAFIEKLAHTTKAIDKKIPFIGN 286
               +T Q   T+  T ++   +      +  + T  +     ++  T++A  K  P    
Sbjct: 2399 PL-TTTQNSTTEVATASEATTKPAPTASEPLTTTQDSTT---EVGTTSEATTKPAPTSSE 2454

Query: 287  QWRDINTAHSE 297
                 + + +E
Sbjct: 2455 PLTTTHESTTE 2465


>gi|293364604|ref|ZP_06611325.1| beta-N-acetylhexosaminidase [Streptococcus oralis ATCC 35037]
 gi|291316862|gb|EFE57294.1| beta-N-acetylhexosaminidase [Streptococcus oralis ATCC 35037]
          Length = 1251

 Score = 41.4 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 56/306 (18%), Positives = 105/306 (34%), Gaps = 29/306 (9%)

Query: 157 LTKEGITSIRTIEGSSVTIKSESIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVV 216
           ++ +GIT   T E +  TI+      K ++ S    +    + K       E  +    V
Sbjct: 32  VSADGITPAPTAEETVQTIQESPQAVKETVDSKVPEKLEEKADKPVKEEVKEDQEAPRTV 91

Query: 217 ----EESISKINSQLSKSTPQGIWTKALTKADPALESIYQRGKIFSNTIKNNAFIEKLAH 272
               EES + + ++ +  TP            PA  +  ++              E+ A 
Sbjct: 92  APTTEESSAPVVTENATPTPTAEKESPAPAETPAESTSSEKKNEAVTPAVATPSTERAAQ 151

Query: 273 TTKAIDKKIPFIGNQWRDINTAHSEFKMVPLSDQTLFRDFQGLCGKNIDNQFILDLNRAS 332
             + + K+     +  R   +     +++  +    + D   L G +   +F+LD    +
Sbjct: 152 VNEKLAKRKMISIDAGRKYFSPDQLKEIIDKAKHYGYTDLHLLVGND-GMRFMLD--DMT 208

Query: 333 FIFNGKKLARDNSAEAIQKLMNQFAKNP--------KQLQLISSYANQSI---------- 374
              NGK  A D+   A++   + + K+P        +   LI+   N+ I          
Sbjct: 209 ITANGKTYASDDVKRALENGTDAYYKDPNGNHLTESQMTDLINYAKNKGIGLIPTVNSPG 268

Query: 375 FADSVVHLMQSI----PEFAKYASKSGSASKFTAKTLTNGEVAFTAKYTTKVQAVDKIAG 430
             D+++H M+ +    P F  +  +S        K       A   KY T       I  
Sbjct: 269 HMDAILHAMKELGIQKPNFNYFGKESARTVDLDNKEAVAFTKALIDKYATYFAGKTDIFN 328

Query: 431 KPLKEY 436
             L EY
Sbjct: 329 IGLDEY 334


>gi|258620006|ref|ZP_05715046.1| hypothetical protein VMD_00920 [Vibrio mimicus VM573]
 gi|258587739|gb|EEW12448.1| hypothetical protein VMD_00920 [Vibrio mimicus VM573]
          Length = 213

 Score = 41.0 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 24/42 (57%)

Query: 66  KDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIP 107
           +D+A  V ++++P++GT  + K G+ G   +G + D     P
Sbjct: 172 RDIAYQVLMAILPVWGTVEDIKSGDAGMATLGVLGDVMFFYP 213


>gi|224050145|ref|XP_002194426.1| PREDICTED: similar to KIAA1322 protein [Taeniopygia guttata]
          Length = 773

 Score = 41.0 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 41/241 (17%), Positives = 79/241 (32%), Gaps = 20/241 (8%)

Query: 137 AAKEACTIAQATEKTAKLTALTKEGITSIRTIEGSSVTIKSESIGTKASISSTNTAEKSA 196
           A +++ T  +    T KL + T + +     I   SV+  S  + T  S+S+ +  +   
Sbjct: 204 AVRKSSTFPRTGYDTVKLYSPTSKTLNRSDDISVCSVSSLSTELSTTLSVSNEDILDFVV 263

Query: 197 ISQKIT-TNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADPALESIYQRGK 255
            S      N  T+    ++V   S    + Q  +         +  K      + + R  
Sbjct: 264 TSSSSAIVNLETDEAHFSDVTLNSSRDSSDQNQQQYCHETDVDSKRKILGPFTNFFARNL 323

Query: 256 IFSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSEF---------KMVPLSDQ 306
               T K +A +EK       +  K+P   N  +D      E+          + P  + 
Sbjct: 324 F---TRKQSARLEKQNDVRWKLFGKVPLGENLQKDAKKIQKEYEEKTGRAERPLSPKQNV 380

Query: 307 TLFRDFQGLCGKNI---DNQFILDLNRASFIFNGKKLARDNSAEAIQKLMNQFAKNPKQL 363
               DF+ L    +   D    L    A       +  R    E + +   +  K  ++ 
Sbjct: 381 RKNLDFEPLSTTALILEDRPANLPAKPAE----EAQKHRQQYEEMVVQAKKRELKEAQKR 436

Query: 364 Q 364
           +
Sbjct: 437 K 437


>gi|221120680|ref|XP_002160570.1| PREDICTED: similar to signal transducer and activator of
           transcription 5 [Hydra magnipapillata]
          Length = 414

 Score = 41.0 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 33/233 (14%), Positives = 70/233 (30%), Gaps = 18/233 (7%)

Query: 214 EVVEESISKINSQLSKSTPQGIWTKALTKADPALESIYQRGKIFSNTIKNNAFIEKLAHT 273
            V  E   +++ +         W +       +   +Y R +IFSN   +   I + +  
Sbjct: 141 RVPFEVPEEVSWKEMAVALNARWIQTAEYELHSNHLLYLRDRIFSNITSDKNIISEDSMI 200

Query: 274 TKAIDKKIPFIGNQWRDINTAHSEFKMVPL-SDQTLFRDFQGLCGKNIDNQFILDLNRAS 332
              +  K P  G  +      H   ++V     +           + + ++ +L+    +
Sbjct: 201 PWTLFNKEPLKGRSFTFWEWFHGSLEVVRKHLKEHWKDQCLEFMTRQLAHKNLLEKQPGT 260

Query: 333 FIF---NGKKLARD-------NSAEAIQKLMNQFAKNPKQLQLISSYANQSIFADS-VVH 381
           FI    +G+  A         N    +  L    +K+     L        IF    + H
Sbjct: 261 FIIRFSDGELGAITIAWRCEVNGKPEVWYLQPWSSKDLTIRSLA-----DRIFDLPELTH 315

Query: 382 LMQSIPEFAKYASKSGSASKFTAKTLTNGEVAFTAKYTTKVQAVDKIAGKPLK 434
           L   IP+   +        +    +         A+    +   ++ A  P  
Sbjct: 316 LYPDIPKEQAFGGFQTKEVERETDSSGYVTSGIVARIIHHI-PTNQNAISPQS 367


>gi|170102697|ref|XP_001882564.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164642461|gb|EDR06717.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 516

 Score = 41.0 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 38/237 (16%), Positives = 76/237 (32%), Gaps = 32/237 (13%)

Query: 212 TTEVVEESISKINSQLSKSTPQGIWTKALTKADPALE----------SIYQRGKIFSNTI 261
            +EV ++++  +  +  K T   I+ K   KAD   E           I           
Sbjct: 88  ISEVSQKNLQSLKGK-IKRTADDIFVKTFLKADTKSEEQREAIRSLLQIVTGLNGVQTLR 146

Query: 262 KNNAFIEKLAHTTKAIDKKIPFIGNQWRD----INTAHSEFKMVPLSDQTLFRDFQGLCG 317
              +  ++L    K+     P I   W+     +   H +F  + +    L  +F     
Sbjct: 147 VELSSPDRL----KSFRMATPLIDFAWQACSPALRRVHFDFP-LDVMKCVLTSNFHLPNL 201

Query: 318 KNIDNQFILDLNRASFIFNGKKLARDNSAEAIQKLMNQFAKNPKQLQLISSYANQSIFAD 377
           + +  +F +                D+    I  L+     +   LQ ++ + ++     
Sbjct: 202 EELSVRFSITYR-----------TTDSGQVIITNLVPFVNNHHLTLQKLTLFTHEHFHLA 250

Query: 378 SVVHLMQSIPEFAKYASKSGSASKFTAKTLT-NGEVAFTAKYTTKVQAVDKIAGKPL 433
              H +  +P  A  +   G  S     T   +  +   A   T ++ V +  GKP 
Sbjct: 251 PFFHQLSRMPRLASLSVTQGYVSTLQTDTSGLHSFLTLHADTLTSLKLVFQALGKPY 307


>gi|312961200|ref|ZP_07775705.1| hypothetical protein PFWH6_3115 [Pseudomonas fluorescens WH6]
 gi|311284858|gb|EFQ63434.1| hypothetical protein PFWH6_3115 [Pseudomonas fluorescens WH6]
          Length = 1238

 Score = 40.7 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 63/192 (32%), Gaps = 15/192 (7%)

Query: 70   VDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGGSIALKA 129
              +   ++P  G Y++F  GN G G+     D   L    G   R   +L+R G      
Sbjct: 1026 KAILTGLVPFVGAYQDFTNGNIGSGLFNLALDVGGLALGAGGRVR---SLLRAGKGLTPN 1082

Query: 130  GTAGTMIAAKEACTIAQATEKTAKLTALTKEGITSIRTIEGS---SVTIKSESIGTKASI 186
               G     +   T+A  T K A    + + G  +   I+ S   +    + + G    +
Sbjct: 1083 PVIGI--VRRLGSTVAPVTPKIAWSKPVARFGDRAFNFIKESVLFTSAAMNPADGYAQLV 1140

Query: 187  SSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADPA 246
             +     K      +     + +GK        +  +  +L      G W++A T     
Sbjct: 1141 DA---GLKGLFKITLLAGGVSRLGKAA----PHLVTVEEKLRAYWLAGGWSRASTPVQTG 1193

Query: 247  LESIYQRGKIFS 258
                 Q   I +
Sbjct: 1194 TAGTSQGVVIHA 1205


>gi|302530013|ref|ZP_07282355.1| preprotein translocase, SecA subunit [Streptomyces sp. AA4]
 gi|302438908|gb|EFL10724.1| preprotein translocase, SecA subunit [Streptomyces sp. AA4]
          Length = 972

 Score = 40.7 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 58/183 (31%), Gaps = 20/183 (10%)

Query: 139 KEACTIAQATEKTAKLTALTKEGITSIRTIEGSSVTIKSESIGTKASISSTNTAEKSAIS 198
           KEA  +A+A  K A   A    G      + G +  I ++ +  +  +     +E+   +
Sbjct: 485 KEALIVARAGRKGAVTVATNMAG-RGTDIVLGGNPDIIADEVLRERGLDPVENSEEYEAA 543

Query: 199 QK-----ITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADPALESIYQR 253
                  I   +  E  +  E     +       S+     +  ++  + DP     Y  
Sbjct: 544 WPKVLEEIKEEARAEADEVREAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGESRFYLS 603

Query: 254 GKIFSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSEFKMVPLSDQTLFRDFQ 313
                    N   +E++  TT  +   +P              E KMV  + ++     +
Sbjct: 604 LGDDLMRRFNAVLVERIM-TTMRLPDDVPI-------------EHKMVSKAIKSAQTQVE 649

Query: 314 GLC 316
            L 
Sbjct: 650 QLN 652


>gi|82000352|sp|Q5UR20|YR366_MIMIV RecName: Full=Putative ATP-dependent RNA helicase R366
 gi|55416985|gb|AAV50635.1| unknown [Acanthamoeba polyphaga mimivirus]
          Length = 1766

 Score = 40.7 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 83/248 (33%), Gaps = 37/248 (14%)

Query: 217  EESISKINSQLSKSTPQGIWTKALTKADPALESIYQRGKIFSNTIKNNAFIEKLAHTTKA 276
            +E +    S++++  P+G +T+A+  A    E+        S T+KN  ++    +    
Sbjct: 994  KEDVELDESEITRRVPKGTYTRAIIIATNVAEA--------SITLKNLKYVVDTGYNKVV 1045

Query: 277  IDKKIPFIGNQWRDINTAHSEFKMVPLSDQTLFRDFQGLCGKNIDNQFILDLNRASFIFN 336
            +   I  + + W    +  S  +      +    DF  L   N              + N
Sbjct: 1046 VYDPIDGVYDTWTLPISFSSAMQRRGRVGRLSSGDFYALYSLNK-------------VIN 1092

Query: 337  GK---KLARDNSAEAIQKLMNQFAKNPKQLQLISSYANQSIFADSVVHLMQS--IPEFAK 391
             K   K+A  N  + + KL+  +  +P  +  ++     S     V   + +  +PE   
Sbjct: 1093 NKTAYKIADINIKDTMVKLIKSYPNDPFIISPMNDINQISNLVSIVNKRLTNNYVPEDLI 1152

Query: 392  YASKSGSASKFTAKTLTNGEVAFTAKYTTKVQAVDKIAGKPLKEYGLKISGILSPDKATE 451
            Y   +     +         +     Y   +  + +        YG     +L      +
Sbjct: 1153 YDILNNPRPYYDI-------INKQYLYIPDLTDISQY----YTYYGKSSDIVLDEFDPNK 1201

Query: 452  LQRSFYLK 459
            +  S YL+
Sbjct: 1202 INLSDYLR 1209


>gi|269105057|ref|ZP_06157752.1| hypothetical protein VDA_000206 [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268160692|gb|EEZ39190.1| hypothetical protein VDA_000206 [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 556

 Score = 40.7 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 40/98 (40%), Gaps = 14/98 (14%)

Query: 321 DNQFILDLNRASFIFNGKKLARDNSAEAIQKLMNQFAKNPKQLQL-ISSYANQSIFADSV 379
             QF  D +RA+++ +G +++R+  +            +  ++   +S +ANQ +FA  +
Sbjct: 417 SEQFEKDFDRATYLVDGAQISRNEDSTL---------DDISKIPTGVSYFANQELFASVL 467

Query: 380 VHLMQSIPEFAKYASKSGSASKFTAKTLTNGEVAFTAK 417
           + LM                S F      +G +   A+
Sbjct: 468 ISLM----NEQGITPIGDPTSTFNLYNKEDGTMELHAQ 501


>gi|311977751|ref|YP_003986871.1| putative ATP-dependent RNA helicase [Acanthamoeba polyphaga
            mimivirus]
 gi|308204787|gb|ADO18588.1| putative ATP-dependent RNA helicase [Acanthamoeba polyphaga
            mimivirus]
          Length = 1766

 Score = 40.7 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 39/248 (15%), Positives = 83/248 (33%), Gaps = 37/248 (14%)

Query: 217  EESISKINSQLSKSTPQGIWTKALTKADPALESIYQRGKIFSNTIKNNAFIEKLAHTTKA 276
            +E +    S++++  P+G +T+A+  A    E+        S T+KN  ++    +    
Sbjct: 994  KEDVELDESEITRRVPKGTYTRAIIIATNVAEA--------SITLKNLKYVVDTGYNKVV 1045

Query: 277  IDKKIPFIGNQWRDINTAHSEFKMVPLSDQTLFRDFQGLCGKNIDNQFILDLNRASFIFN 336
            +   I  + + W    +  S  +      +    DF  L   N              + N
Sbjct: 1046 VYDPIDGVYDTWTLPISFSSAMQRRGRVGRLSSGDFYALYSLNK-------------VIN 1092

Query: 337  GK---KLARDNSAEAIQKLMNQFAKNPKQLQLISSYANQSIFADSVVHLMQS--IPEFAK 391
             K   K+A  N  + + KL+  +  +P  +  ++     S     V   + +  +PE   
Sbjct: 1093 NKTAYKIADINIKDTMVKLIKSYPNDPFIISPMNDINQISNLVSIVNKRLTNNYVPEDLI 1152

Query: 392  YASKSGSASKFTAKTLTNGEVAFTAKYTTKVQAVDKIAGKPLKEYGLKISGILSPDKATE 451
            Y   +     +         +     Y   +  + +        YG     +L      +
Sbjct: 1153 YDILNNPRPYYDI-------INKQYLYIPDLTDISQY----YTYYGKSSDIVLDEFDPNK 1201

Query: 452  LQRSFYLK 459
            +  S YL+
Sbjct: 1202 INLSDYLR 1209


>gi|15596905|ref|NP_250399.1| translocator protein PopB [Pseudomonas aeruginosa PAO1]
 gi|9947682|gb|AAG05097.1|AE004597_11 translocator protein PopB [Pseudomonas aeruginosa PAO1]
          Length = 390

 Score = 40.7 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 65/169 (38%), Gaps = 19/169 (11%)

Query: 61  ISTKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLV 120
           +S  V+  A D  +S        +E  +   G  ++G     ALL  VV +G  A   L 
Sbjct: 208 VSQSVQQAAADGLIS--------KEVMEK-LGPALMGIEMAVALLAAVVSFGGSAVGGLA 258

Query: 121 RGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEGITSIRTIE-GSSVTIKSES 179
           R G         G   A   A   ++  +   K  +L   G +   +++ G  V+  +  
Sbjct: 259 RLG------AKIGGKAAEMTASLASKVADLGGKFGSLA--GQSLSHSLKLGVQVSDLTLD 310

Query: 180 IGTKASISSTNTAE-KSAISQKITTNSTTEIGKTTEVVEESISKINSQL 227
           +   A+ ++ +  + K+A  Q     S  ++     V+E    +++  L
Sbjct: 311 VANGAAQATHSGFQAKAANRQADVQESRADLTTLQGVIERLKEELSRML 359


>gi|330812350|ref|YP_004356812.1| methyl accepting chemotaxis-related protein [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327380458|gb|AEA71808.1| putative methyl accepting chemotaxis-related protein [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 686

 Score = 40.7 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 40/211 (18%), Positives = 83/211 (39%), Gaps = 23/211 (10%)

Query: 45  VRELTQNKA--------STEQVIDISTKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGIV 96
           +RE  Q+ A        S++++ DI + + D+A     +++ +    +    G+ G G  
Sbjct: 484 IREQIQDTAKRIKRLGESSQEIGDIVSLIDDIADQT--NILALNAAIQASMAGDAGRGFA 541

Query: 97  GAISDAALLIPVVGYGARAAINLVRGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTA 156
               +   L        R    LVR    A++A T   +I      ++ Q T +  +   
Sbjct: 542 VVADEVQRLAERSSAATRQIETLVR----AIQADTNEAVI------SMEQTTTEVVRGAR 591

Query: 157 LTKEGITSIRTIEGSSVTIKSE-SIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEV 215
           L ++   ++  IEG S T+ +     + A+   T +A + +++  +    T++    +  
Sbjct: 592 LAQDAGVALEEIEGVSKTLAALIQSISNAAQQQTTSAGQISLTMNVIQQITSQTSSGSTA 651

Query: 216 VEESISKINSQLS--KSTPQGIWTKALTKAD 244
             ESI  +    S  + +  G    A    D
Sbjct: 652 TAESIGNLAKMASQLRRSVSGFTLPAAAAGD 682


>gi|29826005|gb|AAO91773.1| PopB [Pseudomonas aeruginosa]
          Length = 390

 Score = 40.3 bits (92), Expect = 0.59,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 65/169 (38%), Gaps = 19/169 (11%)

Query: 61  ISTKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLV 120
           +S  V+  A D  +S        +E  +   G  ++G     ALL  VV +G  A   L 
Sbjct: 208 VSQSVQQAAADGLIS--------KEVMEK-LGPALMGIEIAVALLAAVVSFGGSAVGGLA 258

Query: 121 RGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEGITSIRTIE-GSSVTIKSES 179
           R G         G   A   A   ++  +   K  +L   G +   +++ G  V+  +  
Sbjct: 259 RLG------AKIGGKAAEMTASLASKVADLGGKFGSLA--GQSLSHSLKLGVQVSDLTLD 310

Query: 180 IGTKASISSTNTAE-KSAISQKITTNSTTEIGKTTEVVEESISKINSQL 227
           +   A+ ++ +  + K+A  Q     S  ++     V+E    +++  L
Sbjct: 311 VANGAAQATHSGFQAKAANRQADVQESRADLTTLQGVIERLKEELSRML 359


>gi|315612110|ref|ZP_07887026.1| beta-N-acetylhexosaminidase [Streptococcus sanguinis ATCC 49296]
 gi|315315773|gb|EFU63809.1| beta-N-acetylhexosaminidase [Streptococcus sanguinis ATCC 49296]
          Length = 1251

 Score = 40.3 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 54/306 (17%), Positives = 103/306 (33%), Gaps = 29/306 (9%)

Query: 157 LTKEGITSIRTIEGSSVTIKSESIGTKASISSTNTAEKSAISQKITTNSTTEIGK----T 212
           ++ +GIT   T E +  TI+      K ++ S    +    + K       E  +     
Sbjct: 32  VSADGITPAPTAEETVQTIQESPQAVKETVDSKVPEKLEEKADKPVKEEVKEDQEDHRTV 91

Query: 213 TEVVEESISKINSQLSKSTPQGIWTKALTKADPALESIYQRGKIFSNTIKNNAFIEKLAH 272
               EES + + ++ +  TP            PA  +  ++              E+ A 
Sbjct: 92  APKTEESSAPVVTENATPTPTAEKESPAPAETPAESTPSEKKNEAVTPAVATPSTERTAQ 151

Query: 273 TTKAIDKKIPFIGNQWRDINTAHSEFKMVPLSDQTLFRDFQGLCGKNIDNQFILDLNRAS 332
             + + K+     +  R   +     +++  +    + D   L G +   +F+LD    +
Sbjct: 152 VNEKLAKRKMISIDAGRKYFSPDQLKEIIDKAKHYGYTDLHLLVGND-GMRFMLD--DMT 208

Query: 333 FIFNGKKLARDNSAEAIQKLMNQFAKNP--------KQLQLISSYANQSI---------- 374
              NGK  A D+   A++   + + K+P        +   LI+   N+ I          
Sbjct: 209 ITANGKTYASDDVKRALENGTDAYYKDPNGNHLTESQMTDLINYAKNKGIGLIPTVNSPG 268

Query: 375 FADSVVHLMQSI----PEFAKYASKSGSASKFTAKTLTNGEVAFTAKYTTKVQAVDKIAG 430
             D+++H M+ +    P F  +  +S        K       A   KY         I  
Sbjct: 269 HMDAILHAMKELGIQKPNFNYFGKESARTVDLDNKEALAFTKALIDKYAAYFAGKSDIFN 328

Query: 431 KPLKEY 436
             L EY
Sbjct: 329 IGLDEY 334


>gi|218892338|ref|YP_002441205.1| translocator protein PopB [Pseudomonas aeruginosa LESB58]
 gi|254234807|ref|ZP_04928130.1| translocator protein PopB [Pseudomonas aeruginosa C3719]
 gi|254240053|ref|ZP_04933375.1| translocator protein PopB [Pseudomonas aeruginosa 2192]
 gi|126166738|gb|EAZ52249.1| translocator protein PopB [Pseudomonas aeruginosa C3719]
 gi|126193431|gb|EAZ57494.1| translocator protein PopB [Pseudomonas aeruginosa 2192]
 gi|218772564|emb|CAW28347.1| translocator protein PopB [Pseudomonas aeruginosa LESB58]
          Length = 390

 Score = 40.3 bits (92), Expect = 0.68,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 65/169 (38%), Gaps = 19/169 (11%)

Query: 61  ISTKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLV 120
           +S  V+  A D  +S        +E  +   G  ++G     ALL  VV +G  A   L 
Sbjct: 208 VSQSVQQAAADGLIS--------KEVMEK-LGPALMGIEIAVALLAAVVSFGGSAVGGLA 258

Query: 121 RGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEGITSIRTIE-GSSVTIKSES 179
           R G         G   A   A   ++  +   K  +L   G +   +++ G  V+  +  
Sbjct: 259 RLG------AKIGGKAAEMTASLASKVADLGGKFGSLA--GQSLSHSLKLGVQVSDLTLD 310

Query: 180 IGTKASISSTNTAE-KSAISQKITTNSTTEIGKTTEVVEESISKINSQL 227
           +   A+ ++ +  + K+A  Q     S  ++     V+E    +++  L
Sbjct: 311 VANGAAQATHSGFQAKAANRQADVQESRADLTTLQGVIERLKEELSRML 359


>gi|296418611|ref|XP_002838924.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295634907|emb|CAZ83115.1| unnamed protein product [Tuber melanosporum]
          Length = 609

 Score = 40.3 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 46/104 (44%)

Query: 98  AISDAALLIPVVGYGARAAINLVRGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTAL 157
            ++D   +   V  G +       G ++      + T +A  +  + A ++E+    T+ 
Sbjct: 19  VVTDVVFVTASVSGGGKVIGFTTLGEAVEKTLSPSPTTVAPPKVTSKAASSERPRATTSE 78

Query: 158 TKEGITSIRTIEGSSVTIKSESIGTKASISSTNTAEKSAISQKI 201
           T +   +IRT    S T +S  + +  S  +T+T+  ++ S+ I
Sbjct: 79  TLKATEAIRTQSAISSTSESTEVASPTSTLATSTSAIASNSESI 122


>gi|260944672|ref|XP_002616634.1| hypothetical protein CLUG_03875 [Clavispora lusitaniae ATCC 42720]
 gi|238850283|gb|EEQ39747.1| hypothetical protein CLUG_03875 [Clavispora lusitaniae ATCC 42720]
          Length = 861

 Score = 40.3 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 36/224 (16%), Positives = 77/224 (34%), Gaps = 33/224 (14%)

Query: 230 STPQGIWTKALTKADPALESIYQRGKIFSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWR 289
           S  + I  ++ T  +  L S+Y+ GK+    ++    I  +   T ++ K          
Sbjct: 588 SNNKEIVAQSYTNLEYYLFSLYEIGKLLDERLRATNGIGIINIDTHSVFKLKAIELFTSI 647

Query: 290 DINTAHSEFKMV-----PLSDQTLFRDFQGLCGKNIDNQFILDLNRASFIFNGKKLARDN 344
              +  + FKMV      L D   + D+         N FILD +               
Sbjct: 648 RKFSEDAIFKMVDVKLKELLDMVEYDDWMPQTSNTDPNFFILDFSLFL------------ 695

Query: 345 SAEAIQKLMNQFAKNPKQLQLISSYANQSIFADSVVHLMQSIPEFAKYASKS-------- 396
                  +      + + L L  S+      A+  +++++  P + + A  +        
Sbjct: 696 -ENLFNSIFTNLPSSFRTLGLFRSF---DFIAEYFLNILEDAPHYNRIAISNLNLDITHL 751

Query: 397 ----GSASKFTAKTLTNGEVAFTAKYTTKVQAVDKIAGKPLKEY 436
                + ++  +     G VA  + + T  Q++D +  +   E+
Sbjct: 752 EKSMANLAQSESNDPEQGSVALQSTFETLRQSIDLLLLENYDEF 795


>gi|77461526|ref|YP_351033.1| chemotaxis sensory transducer [Pseudomonas fluorescens Pf0-1]
 gi|77385529|gb|ABA77042.1| type IV pilus biogenesis protein/tiwtiching mobility
           protein/methyl-accepting chemotaxis-related protein
           [Pseudomonas fluorescens Pf0-1]
          Length = 686

 Score = 40.3 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 79/194 (40%), Gaps = 21/194 (10%)

Query: 45  VRELTQNKA--------STEQVIDISTKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGIV 96
           +RE  Q+ A        S++++ DI + + D+A     +++ +    +    G+ G G  
Sbjct: 484 IREQIQDTAKRIKRLGESSQEIGDIVSLIDDIADQT--NILALNAAIQASMAGDAGRGFA 541

Query: 97  GAISDAALLIPVVGYGARAAINLVRGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTA 156
               +   L        R    LVR    A++  T   +I      ++ Q T +  +   
Sbjct: 542 VVADEVQRLAERSSAATRQIETLVR----AIQTDTNEAVI------SMEQTTTEVVRGAR 591

Query: 157 LTKEGITSIRTIEGSSVTIKSE-SIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEV 215
           L ++   ++  IEG S T+ +     + A+   T++A + +++  +    T++    +  
Sbjct: 592 LAQDAGVALEEIEGVSKTLAALIQSISNAAQQQTSSAGQISLTMNVIQQITSQTSSGSTA 651

Query: 216 VEESISKINSQLSK 229
             ESI  +    S+
Sbjct: 652 TAESIGNLAKMASQ 665


>gi|292656292|ref|YP_003536189.1| ABC transporter permease [Haloferax volcanii DS2]
 gi|291370426|gb|ADE02653.1| ABC-type transport system permease protein (homolog of LolDCE
           lipoprotein release factor) [Haloferax volcanii DS2]
          Length = 411

 Score = 39.9 bits (91), Expect = 0.82,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 62/172 (36%), Gaps = 8/172 (4%)

Query: 105 LIPVVGYGARAAINLVRG-GSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEGIT 163
           L  VVG   R  +  +R   S  +     G  +A     T++          A+  EG+ 
Sbjct: 7   LFGVVGLAGRRVLGRLRTTSSKQVLLSVIGVALAVTLMTTVSGIALGLGAENAIQSEGVD 66

Query: 164 SIRTIEGSSVTIKSESIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISK- 222
                E S+ +  + S+G+     +    ++ A  +++   +  +    T   E+  +  
Sbjct: 67  YWVVPEASTASSVAVSVGSPQLGDTHAITDRLARDERVDYATPVQTQLVTLAPEDGSTDE 126

Query: 223 ------INSQLSKSTPQGIWTKALTKADPALESIYQRGKIFSNTIKNNAFIE 268
                 I      ++  G+ T+ALT  DP   +    G      + N+A  E
Sbjct: 127 YVLAAGIIPPEEPTSVVGVSTEALTPGDPHYANGSYDGPRTGELVLNDAAAE 178


>gi|162450264|ref|YP_001612631.1| hypothetical protein sce1992 [Sorangium cellulosum 'So ce 56']
 gi|161160846|emb|CAN92151.1| similar to glycine-rich protein [Sorangium cellulosum 'So ce 56']
          Length = 689

 Score = 39.9 bits (91), Expect = 0.82,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 39/111 (35%), Gaps = 3/111 (2%)

Query: 106 IPVVGYGARAAINLVRGGSIALKAGTAG--TMIAAKEACTIAQATEKTAKLTALTKEGIT 163
            P       A +   + G  AL A   G   + A +       AT+      A T+ G T
Sbjct: 219 APATTQAGEATLAATQPGETALAATQPGETALTATQPGANALAATQPGETALAATQPGET 278

Query: 164 SIRTIEGSSVTIKSESIGTKASISSTNTAEKSAISQKITTN-STTEIGKTT 213
           ++   +     + +   G  A  ++   A   A +Q      +TT+ G  T
Sbjct: 279 ALAATQPGETALAATQPGANALAATQPGANALAATQPGANALATTQAGDAT 329



 Score = 36.8 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 33/90 (36%), Gaps = 2/90 (2%)

Query: 113 ARAAINLVRGGSIALKAGTAG--TMIAAKEACTIAQATEKTAKLTALTKEGITSIRTIEG 170
             AA    + G   L A   G   + A +   T   AT+  A   A T+ G T++   + 
Sbjct: 216 GEAAPATTQAGEATLAATQPGETALAATQPGETALTATQPGANALAATQPGETALAATQP 275

Query: 171 SSVTIKSESIGTKASISSTNTAEKSAISQK 200
               + +   G  A  ++   A   A +Q 
Sbjct: 276 GETALAATQPGETALAATQPGANALAATQP 305


>gi|107101140|ref|ZP_01365058.1| hypothetical protein PaerPA_01002172 [Pseudomonas aeruginosa PACS2]
          Length = 376

 Score = 39.9 bits (91), Expect = 0.84,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 65/169 (38%), Gaps = 19/169 (11%)

Query: 61  ISTKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLV 120
           +S  V+  A D  +S        +E  +   G  ++G     ALL  VV +G  A   L 
Sbjct: 194 VSQSVQQAAADGLIS--------KEVMEK-LGPALMGIEIAVALLAAVVSFGGSAVGGLA 244

Query: 121 RGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEGITSIRTIE-GSSVTIKSES 179
           R G         G   A   A   ++  +   K  +L   G +   +++ G  V+  +  
Sbjct: 245 RLG------AKIGGKAAEMTASLASKVADLGGKFGSLA--GQSLSHSLKLGVQVSDLTLD 296

Query: 180 IGTKASISSTNTAE-KSAISQKITTNSTTEIGKTTEVVEESISKINSQL 227
           +   A+ ++ +  + K+A  Q     S  ++     V+E    +++  L
Sbjct: 297 VANGAAQATHSGFQAKAANRQADVQESRADLTTLQGVIERLKEELSRML 345


>gi|304414136|ref|ZP_07395504.1| hypothetical protein REG_1209 [Candidatus Regiella insecticola
           LSR1]
 gi|304283350|gb|EFL91746.1| hypothetical protein REG_1209 [Candidatus Regiella insecticola
           LSR1]
          Length = 717

 Score = 39.5 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 50/143 (34%), Gaps = 9/143 (6%)

Query: 76  MIPIYGTYREFKKGNYGWG--IVGAISDAALLIPVVGYGAR-AAINLVRGGSIALKAGTA 132
           +IP Y T ++ K+G    G  + GAI +    I   G  A   A   +  G I +K    
Sbjct: 266 LIPFYSTIQDIKEGTLTVGGVVFGAI-ELLSFIIPFGLAAHAGASAFMAAGKIGVKFSAL 324

Query: 133 GTMI-AAKEACTIAQATEKTAKLTALTKEGITSIRTI----EGSSVTIKSESIGTKASIS 187
           G    A + A T   A + +  L +   + +     +    +G            +A   
Sbjct: 325 GVSNFALQSAKTAVAAKQASKVLASGLADAVNPFNFVGSLFQGGKKVASVVQGNYQALRQ 384

Query: 188 STNTAEKSAISQKITTNSTTEIG 210
             NT    A  ++++  S     
Sbjct: 385 QLNTLPSLARLKQLSNASKATTD 407


>gi|145503778|ref|XP_001437862.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124405021|emb|CAK70465.1| unnamed protein product [Paramecium tetraurelia]
          Length = 2962

 Score = 39.5 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 79/230 (34%), Gaps = 23/230 (10%)

Query: 183  KASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTK 242
            K+   S    ++S    +I+ NS+       +VV  S   +++Q        I  K   K
Sbjct: 1735 KSVEQSIQRKQRS--PSRISRNSSIAQSAIEKVVLMSPYIVDNQTGYEIELTIINKTQKK 1792

Query: 243  ADPALESIYQRGKIFSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSEFK--M 300
                + + YQ+  +          +     +   I K+I  +        +   E+K  M
Sbjct: 1793 IVTVVVAAYQQFALKYAENMEKRVLSIFIRSPSTIFKEINNLNFSRNKDESRQIEYKIGM 1852

Query: 301  VPLSDQTLFR----DFQGLCGKNIDNQFILDLNRASFIFNGKKLARDNSAE----AIQKL 352
            +  S Q L R    D Q +   + D  FI + +        K + +    +     +Q  
Sbjct: 1853 LNKSTQILIRIETLDQQKILTISSDILFINNSSSD---IELKLINKITQQQFILVVLQND 1909

Query: 353  MNQFAKNPKQLQLISSYANQSIFADSVVHLMQSIPEFAKYASKSGSASKF 402
                    +Q  ++  Y+   +++  +        +  K   K+G+ + F
Sbjct: 1910 KKYIPLGYEQSMILVRYSKDGVWSQGM--------DIQKLILKNGNYNLF 1951


>gi|225625041|gb|ACN96611.1| muramidase-released protein [Streptococcus suis]
          Length = 1527

 Score = 39.5 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 37/230 (16%), Positives = 72/230 (31%), Gaps = 15/230 (6%)

Query: 80  YGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGG-SIALKAGTAGTMIAA 138
           YGT ++F    Y +G    +   +L++       +A   +     +IA     A T   A
Sbjct: 12  YGTKQQFSIRKYHFGAASVLLGVSLVLGAGAQVVKADETVASSEPTIASSVAPASTEAVA 71

Query: 139 KEA-------CTIAQATEKTAKLTALTKEGITSIRTIEGS----SVTIKSESIGTKASIS 187
           +EA        +    T    +      E +TS   +        +    ++   KA   
Sbjct: 72  EEAEKTNAENTSAVATTSTEVEKAKAVLEQVTSESPLLAGLGQKELAKTEDATLAKAIED 131

Query: 188 STNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADPAL 247
           +      +      +  +  ++      V+ +   + + L K T  G+ T AL    P  
Sbjct: 132 AQTKLAAAKAILADSEATVEQVEAQVAAVKAANETLGNALQKYTVDGLLTAALDTVAPDT 191

Query: 248 ESIYQRGKIFSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSE 297
            +   +      T+ +       A  + A         +  RD   A  E
Sbjct: 192 TASTLKVGDGEGTLLDRTT---TATPSMAEPNGATIAPHTLRDKVEATKE 238


>gi|328543116|ref|YP_004303225.1| hypothetical protein SL003B_1497 [polymorphum gilvum SL003B-26A1]
 gi|326412862|gb|ADZ69925.1| hypothetical protein SL003B_1497 [Polymorphum gilvum SL003B-26A1]
          Length = 1768

 Score = 39.5 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 56/158 (35%), Gaps = 6/158 (3%)

Query: 115  AAINLVRGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEGITSIRTIEGSSVT 174
             A+   RG  +      AG + AA    T A + E +     +      + R++   S  
Sbjct: 1022 GAVGEARGVLVGESQKAAGAVSAAMTEATSALSGEGSRVRDLVLSAVAEAARSMAAESEK 1081

Query: 175  IKSESIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEES------ISKINSQLS 228
             ++  +GT A  S + T E + + + +        G  +   E++       ++    L 
Sbjct: 1082 ARTLYVGTLADFSGSLTGESARVREDLARTIAEISGNLSAESEQARLTLTRTAEEMRNLM 1141

Query: 229  KSTPQGIWTKALTKADPALESIYQRGKIFSNTIKNNAF 266
                  + T+       A E + QRG   +  + + A 
Sbjct: 1142 SGEADIVRTRVSGAVQQAAELLSQRGNAVAKELLDKAS 1179


>gi|108764006|ref|YP_634808.1| fibril biogenesis regulator DifG [Myxococcus xanthus DK 1622]
 gi|33150460|gb|AAP97128.1| defective in fruiting G [Myxococcus xanthus]
 gi|108467886|gb|ABF93071.1| fibril biogenesis regulator DifG [Myxococcus xanthus DK 1622]
          Length = 200

 Score = 39.1 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 3/127 (2%)

Query: 102 AALLIPVVGYGARAAINLVRGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEG 161
             L IP V     +    + GG+  + +G  G     + A  +    +  A L AL  EG
Sbjct: 38  VDLSIPRVLLTGPSDAAELLGGAAPVVSGWLGIQGGLRGALLLVLPQQDGAALEALLLEG 97

Query: 162 ITSIRTIEGSSVTIKSESIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESIS 221
             +I   E  SV  ++ +I   A +S+        +   + T  T   G+  +VV +++ 
Sbjct: 98  QPAIHQTERDSVMAETANIVASACLSAMGRLTGWKL---VPTVPTVRRGRARDVVSDAVG 154

Query: 222 KINSQLS 228
           ++    S
Sbjct: 155 QVEGDAS 161


>gi|18030049|gb|AAL56588.1|AF449411_9 unknown [Myxococcus xanthus DK 1622]
          Length = 168

 Score = 39.1 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 3/127 (2%)

Query: 102 AALLIPVVGYGARAAINLVRGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEG 161
             L IP V     +    + GG+  + +G  G     + A  +    +  A L AL  EG
Sbjct: 6   VDLSIPRVLLTGPSDAAELLGGAAPVVSGWLGIQGGLRGALLLVLPQQDGAALEALLLEG 65

Query: 162 ITSIRTIEGSSVTIKSESIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESIS 221
             +I   E  SV  ++ +I   A +S+        +   + T  T   G+  +VV +++ 
Sbjct: 66  QPAIHQTERDSVMAETANIVASACLSAMGRLTGWKL---VPTVPTVRRGRARDVVSDAVG 122

Query: 222 KINSQLS 228
           ++    S
Sbjct: 123 QVEGDAS 129


>gi|90193559|gb|ABD92371.1| muramidase-released protein [Streptococcus suis]
          Length = 1256

 Score = 39.1 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 59/178 (33%), Gaps = 12/178 (6%)

Query: 80  YGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGG-SIALKAGTAGTMIAA 138
           YGT ++F    Y +G    +   +L++       +A   +     +IA     A T   A
Sbjct: 12  YGTKQQFSIRKYHFGAASVLLGVSLVLGAGAQVVKADETVASSEPTIASSVAPASTEAVA 71

Query: 139 KEA-------CTIAQATEKTAKLTALTKEGITSIRTIEGS----SVTIKSESIGTKASIS 187
           +EA        +    T    +      E +TS   +        +     +   KA   
Sbjct: 72  EEAEKTNAENTSAVATTSTEVEKAKAALEQVTSESPLLAGLGQKELAKTEYATLAKAIED 131

Query: 188 STNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADP 245
           +      +      +  +  ++      V+ +   + ++L K T  G+ T AL    P
Sbjct: 132 AQTKLAAAKAILADSEATVEQVEAQVAAVKVANEALGNELQKYTVDGLLTAALDTVAP 189


>gi|255506550|gb|ACU12365.1| muramidase-released protein [Streptococcus suis]
          Length = 1256

 Score = 39.1 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 60/178 (33%), Gaps = 12/178 (6%)

Query: 80  YGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGG-SIALKAGTAGTMIAA 138
           YGT ++F    Y +G    +   +L++       +A   +     +IA     A T   A
Sbjct: 12  YGTKQQFSIRKYHFGAASVLLGVSLVLGAGAQVVKADETVASSEPTIASSVAPASTEAVA 71

Query: 139 KEA-------CTIAQATEKTAKLTALTKEGITSIRTIEGS----SVTIKSESIGTKASIS 187
           +EA        +    T    +      E +TS   +        +    ++   KA   
Sbjct: 72  EEAEKTNAENTSAVATTSTEVEKAKAVLEQVTSESPLLAGLGQKELAKTEDATLAKAIED 131

Query: 188 STNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADP 245
           +      +      +  +  ++      V+ +   + ++L K T  G+ T AL    P
Sbjct: 132 AQTKLAAAKAILADSEATVEQVEAQVAAVKVANEALGNELQKYTVDGLLTAALDTVAP 189


>gi|225625038|gb|ACN96610.1| muramidase-released protein [Streptococcus suis]
          Length = 1120

 Score = 39.1 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 60/178 (33%), Gaps = 12/178 (6%)

Query: 80  YGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGG-SIALKAGTAGTMIAA 138
           YGT ++F    Y +G    +   +L++       +A   +     +IA     A T   A
Sbjct: 12  YGTKQQFSIRKYHFGAASVLLGVSLVLGAGAQVVKADETVASSEPTIASSVAPASTEAVA 71

Query: 139 KEA-------CTIAQATEKTAKLTALTKEGITSIRTIEGS----SVTIKSESIGTKASIS 187
           +EA        +    T    +      E +TS   +        +    ++   KA   
Sbjct: 72  EEAEKTNAENTSAVATTSTEVEKAKAVLEQVTSESPLLAGLGQKELAKTEDATLAKAIED 131

Query: 188 STNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADP 245
           +      +      +  +  ++      V+ +   + ++L K T  G+ T AL    P
Sbjct: 132 AQTKLAAAKAILADSEATVEQVEAQVAAVKVANEALGNELQKYTVDGLLTAALDTVAP 189


>gi|146318407|ref|YP_001198119.1| hypothetical protein SSU05_0753 [Streptococcus suis 05ZYH33]
 gi|145689213|gb|ABP89719.1| MRP [Streptococcus suis 05ZYH33]
          Length = 1261

 Score = 39.1 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 60/178 (33%), Gaps = 12/178 (6%)

Query: 80  YGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGG-SIALKAGTAGTMIAA 138
           YGT ++F    Y +G    +   +L++       +A   +     +IA     A T   A
Sbjct: 17  YGTKQQFSIRKYHFGAASVLLGVSLVLGAGAQVVKADETVASSEPTIASSVAPASTEAVA 76

Query: 139 KEA-------CTIAQATEKTAKLTALTKEGITSIRTIEGS----SVTIKSESIGTKASIS 187
           +EA        +    T    +      E +TS   +        +    ++   KA   
Sbjct: 77  EEAEKTNAENTSAVATTSTEVEKAKAVLEQVTSESPLLAGLGQKELAKTEDATLAKAIED 136

Query: 188 STNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADP 245
           +      +      +  +  ++      V+ +   + ++L K T  G+ T AL    P
Sbjct: 137 AQTKLAAAKAILADSEATVEQVEAQVAAVKVANEALGNELQKYTVDGLLTAALDTVAP 194


>gi|126153699|emb|CAM35506.1| muramidase-released protein [Streptococcus suis]
 gi|126153707|emb|CAM35510.1| muramidase-released protein [Streptococcus suis]
          Length = 1256

 Score = 39.1 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 60/178 (33%), Gaps = 12/178 (6%)

Query: 80  YGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGG-SIALKAGTAGTMIAA 138
           YGT ++F    Y +G    +   +L++       +A   +     +IA     A T   A
Sbjct: 12  YGTKQQFSIRKYHFGAASVLLGVSLVLGAGAQVVKADETVASSEPTIASSVAPASTEAVA 71

Query: 139 KEA-------CTIAQATEKTAKLTALTKEGITSIRTIEGS----SVTIKSESIGTKASIS 187
           +EA        +    T    +      E +TS   +        +    ++   KA   
Sbjct: 72  EEAEKTNAENTSAVATTSTEVEKAKAVLEQVTSESPLLAGLGQKELAKTEDATLAKAIED 131

Query: 188 STNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADP 245
           +      +      +  +  ++      V+ +   + ++L K T  G+ T AL    P
Sbjct: 132 AQTKLAAAKAILADSEATVEQVEAQVAAVKVANEALGNELQKYTVDGLLTAALDTVAP 189


>gi|126153685|emb|CAM35499.1| muramidase-released protein [Streptococcus suis]
 gi|126153691|emb|CAM35502.1| muramidase-released protein [Streptococcus suis]
 gi|126153703|emb|CAM35508.1| muramidase-released protein [Streptococcus suis]
          Length = 1253

 Score = 39.1 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 60/178 (33%), Gaps = 12/178 (6%)

Query: 80  YGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGG-SIALKAGTAGTMIAA 138
           YGT ++F    Y +G    +   +L++       +A   +     +IA     A T   A
Sbjct: 12  YGTKQQFSIRKYHFGAASVLLGVSLVLGAGAQVVKADETVASSEPTIASSVAPASTEAVA 71

Query: 139 KEA-------CTIAQATEKTAKLTALTKEGITSIRTIEGS----SVTIKSESIGTKASIS 187
           +EA        +    T    +      E +TS   +        +    ++   KA   
Sbjct: 72  EEAEKTNAENTSAVATTSTEVEKAKAVLEQVTSESPLLAGLGQKELAKTEDATLAKAIED 131

Query: 188 STNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADP 245
           +      +      +  +  ++      V+ +   + ++L K T  G+ T AL    P
Sbjct: 132 AQTKLAAAKAILADSEATVEQVEAQVAAVKVANEALGNELQKYTVDGLLTAALDTVAP 189


>gi|253751552|ref|YP_003024693.1| muramidase-released protein precursor (136 kDa surface protein)
           [Streptococcus suis SC84]
 gi|253753453|ref|YP_003026594.1| muramidase-released protein precursor (136 kDa surface protein)
           [Streptococcus suis P1/7]
 gi|417315|sp|P32653|MRP_STRSU RecName: Full=Muramidase-released protein; AltName: Full=136 kDa
           surface protein; Flags: Precursor
 gi|47551|emb|CAA45781.1| MRP [Streptococcus suis]
 gi|82395228|gb|ABB71958.1| muramidase-released protein [Streptococcus suis]
 gi|82395244|gb|ABB71966.1| muramidase-released protein [Streptococcus suis]
 gi|82395255|gb|ABB71971.1| muramidase-released protein [Streptococcus suis]
 gi|82395298|gb|ABB71990.1| muramidase-released protein [Streptococcus suis]
 gi|82395300|gb|ABB71991.1| muramidase-released protein [Streptococcus suis]
 gi|82395302|gb|ABB71992.1| muramidase-released protein [Streptococcus suis]
 gi|89513284|gb|ABD74501.1| muramidase-released protein [Streptococcus suis]
 gi|89513286|gb|ABD74502.1| muramidase-released protein [Streptococcus suis]
 gi|89513288|gb|ABD74503.1| muramidase-released protein [Streptococcus suis]
 gi|89513290|gb|ABD74504.1| muramidase-released protein [Streptococcus suis]
 gi|110815984|gb|ABG91741.1| muramidase-released protein [Streptococcus suis]
 gi|110815986|gb|ABG91742.1| muramidase-released protein [Streptococcus suis]
 gi|110815988|gb|ABG91743.1| muramidase-released protein [Streptococcus suis]
 gi|126153695|emb|CAM35504.1| muramidase-released protein [Streptococcus suis]
 gi|126153697|emb|CAM35505.1| muramidase-released protein [Streptococcus suis]
 gi|126153701|emb|CAM35507.1| muramidase-released protein [Streptococcus suis]
 gi|126153709|emb|CAM35511.1| muramidase-released protein [Streptococcus suis]
 gi|225625048|gb|ACN96614.1| muramidase-released protein [Streptococcus suis]
 gi|251815841|emb|CAZ51449.1| muramidase-released protein precursor (136 kDa surface protein)
           [Streptococcus suis SC84]
 gi|251819699|emb|CAR45511.1| muramidase-released protein precursor (136 kDa surface protein)
           [Streptococcus suis P1/7]
 gi|255506544|gb|ACU12362.1| muramidase-released protein [Streptococcus suis]
 gi|255506552|gb|ACU12366.1| muramidase-released protein [Streptococcus suis]
          Length = 1256

 Score = 39.1 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 60/178 (33%), Gaps = 12/178 (6%)

Query: 80  YGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGG-SIALKAGTAGTMIAA 138
           YGT ++F    Y +G    +   +L++       +A   +     +IA     A T   A
Sbjct: 12  YGTKQQFSIRKYHFGAASVLLGVSLVLGAGAQVVKADETVASSEPTIASSVAPASTEAVA 71

Query: 139 KEA-------CTIAQATEKTAKLTALTKEGITSIRTIEGS----SVTIKSESIGTKASIS 187
           +EA        +    T    +      E +TS   +        +    ++   KA   
Sbjct: 72  EEAEKTNAENTSAVATTSTEVEKAKAVLEQVTSESPLLAGLGQKELAKTEDATLAKAIED 131

Query: 188 STNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADP 245
           +      +      +  +  ++      V+ +   + ++L K T  G+ T AL    P
Sbjct: 132 AQTKLAAAKAILADSEATVEQVEAQVAAVKVANEALGNELQKYTVDGLLTAALDTVAP 189


>gi|126153705|emb|CAM35509.1| muramidase-released protein [Streptococcus suis]
          Length = 1253

 Score = 39.1 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 60/178 (33%), Gaps = 12/178 (6%)

Query: 80  YGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGG-SIALKAGTAGTMIAA 138
           YGT ++F    Y +G    +   +L++       +A   +     +IA     A T   A
Sbjct: 12  YGTKQQFSIRKYHFGAASVLLGVSLVLGAGAQVVKADETVASSEPTIASSVAPASTEAVA 71

Query: 139 KEA-------CTIAQATEKTAKLTALTKEGITSIRTIEGS----SVTIKSESIGTKASIS 187
           +EA        +    T    +      E +TS   +        +    ++   KA   
Sbjct: 72  EEAEKTNAENTSAVATTSTEVEKAKAVLEQVTSESPLLAGLGQKELAKTEDATLAKAIED 131

Query: 188 STNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADP 245
           +      +      +  +  ++      V+ +   + ++L K T  G+ T AL    P
Sbjct: 132 AQTKLAAAKAILADSEATVEQVEAQVAAVKVANEALGNELQKYTVDGLLTAALDTVAP 189


>gi|255506548|gb|ACU12364.1| muramidase-released protein [Streptococcus suis]
          Length = 1256

 Score = 39.1 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 60/178 (33%), Gaps = 12/178 (6%)

Query: 80  YGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGG-SIALKAGTAGTMIAA 138
           YGT ++F    Y +G    +   +L++       +A   +     +IA     A T   A
Sbjct: 12  YGTKQQFSIRKYHFGAASVLLGVSLVLGAGAQVVKADETVASSEPTIASSVAPASTEAVA 71

Query: 139 KEA-------CTIAQATEKTAKLTALTKEGITSIRTIEGS----SVTIKSESIGTKASIS 187
           +EA        +    T    +      E +TS   +        +    ++   KA   
Sbjct: 72  EEAEKTNAENTSAVATTSTEVEKAKAVLEQVTSESPLLAGLGQKELAKTEDATLAKAIED 131

Query: 188 STNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADP 245
           +      +      +  +  ++      V+ +   + ++L K T  G+ T AL    P
Sbjct: 132 AQTKLAAAKAILADSEATVEQVEAQVAAVKVANEALGNELQKYTVDGLLTAALDTVAP 189


>gi|255506546|gb|ACU12363.1| muramidase-released protein [Streptococcus suis]
          Length = 1256

 Score = 39.1 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 60/178 (33%), Gaps = 12/178 (6%)

Query: 80  YGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGG-SIALKAGTAGTMIAA 138
           YGT ++F    Y +G    +   +L++       +A   +     +IA     A T   A
Sbjct: 12  YGTKQQFSIRKYHFGAASVLLGVSLVLGAGAQVVKADETVASSEPTIASSVAPASTEAVA 71

Query: 139 KEA-------CTIAQATEKTAKLTALTKEGITSIRTIEGS----SVTIKSESIGTKASIS 187
           +EA        +    T    +      E +TS   +        +    ++   KA   
Sbjct: 72  EEAEKTNAENTSAVATTSTEVEKAKAVLEQVTSESPLLAGLGQKELAKTEDATLAKAIED 131

Query: 188 STNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADP 245
           +      +      +  +  ++      V+ +   + ++L K T  G+ T AL    P
Sbjct: 132 AQTKLAAAKAILADSEATVEQVEAQVAAVKVANEALGNELQKYTVDGLLTAALDTVAP 189


>gi|126153687|emb|CAM35500.1| muramidase-released protein [Streptococcus suis]
          Length = 1256

 Score = 39.1 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 60/178 (33%), Gaps = 12/178 (6%)

Query: 80  YGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGG-SIALKAGTAGTMIAA 138
           YGT ++F    Y +G    +   +L++       +A   +     +IA     A T   A
Sbjct: 12  YGTKQQFSIRKYHFGAASVLLGVSLVLGAGAQVVKADETVASSEPTIASSVAPASTEAVA 71

Query: 139 KEA-------CTIAQATEKTAKLTALTKEGITSIRTIEGS----SVTIKSESIGTKASIS 187
           +EA        +    T    +      E +TS   +        +    ++   KA   
Sbjct: 72  EEAEKTNAENTSAVATTSTEVEKAKAVLEQVTSESPLLAGLGQKELAKTEDATLAKAIED 131

Query: 188 STNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADP 245
           +      +      +  +  ++      V+ +   + ++L K T  G+ T AL    P
Sbjct: 132 AQTKLAAAKAILADSEATVEQVEAQVAAVKVANEALGNELQKYTVDGLLTAALDTVAP 189


>gi|126153719|emb|CAM35516.1| muramidase-released protein [Streptococcus suis]
          Length = 1226

 Score = 39.1 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 60/178 (33%), Gaps = 12/178 (6%)

Query: 80  YGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGG-SIALKAGTAGTMIAA 138
           YGT ++F    Y +G    +   +L++       +A   +     +IA     A T   A
Sbjct: 12  YGTKQQFSIRKYHFGAASVLLGVSLVLGAGAQVVKADETVASSEPTIASSVAPASTEAVA 71

Query: 139 KEA-------CTIAQATEKTAKLTALTKEGITSIRTIEGS----SVTIKSESIGTKASIS 187
           +EA        +    T    +      E +TS   +        +    ++   KA   
Sbjct: 72  EEAEKTNAENTSAVATTSTEVEKAKAVLEQVTSESPLLAGLGQKELAKTEDATLAKAIED 131

Query: 188 STNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADP 245
           +      +      +  +  ++      V+ +   + ++L K T  G+ T AL    P
Sbjct: 132 AQTKLAAAKAILADSEATVEQVEAQVAAVKVANEALGNELQKYTVDGLLTAALDTVAP 189


>gi|126153689|emb|CAM35501.1| muramidase-released protein [Streptococcus suis]
          Length = 1256

 Score = 39.1 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 60/178 (33%), Gaps = 12/178 (6%)

Query: 80  YGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGG-SIALKAGTAGTMIAA 138
           YGT ++F    Y +G    +   +L++       +A   +     +IA     A T   A
Sbjct: 12  YGTKQQFSIRKYHFGAASVLLGVSLVLGAGAQVVKADETVASSEPTIASSVAPASTEAVA 71

Query: 139 KEA-------CTIAQATEKTAKLTALTKEGITSIRTIEGS----SVTIKSESIGTKASIS 187
           +EA        +    T    +      E +TS   +        +    ++   KA   
Sbjct: 72  EEAEKTNAENTSAVATTSTEVEKAKAVLEQVTSESPLLAGLGQKELAKTEDATLAKAIED 131

Query: 188 STNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADP 245
           +      +      +  +  ++      V+ +   + ++L K T  G+ T AL    P
Sbjct: 132 AQTKLAAAKAILADSEATVEQVEAQVAAVKVANEALGNELQKYTVDGLLTAALDTVAP 189


>gi|126153693|emb|CAM35503.1| muramidase-released protein [Streptococcus suis]
          Length = 1253

 Score = 39.1 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 60/178 (33%), Gaps = 12/178 (6%)

Query: 80  YGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGG-SIALKAGTAGTMIAA 138
           YGT ++F    Y +G    +   +L++       +A   +     +IA     A T   A
Sbjct: 12  YGTKQQFSIRKYHFGAASVLLGVSLVLGAGAQVVKADETVASSEPTIASSVAPASTEAVA 71

Query: 139 KEA-------CTIAQATEKTAKLTALTKEGITSIRTIEGS----SVTIKSESIGTKASIS 187
           +EA        +    T    +      E +TS   +        +    ++   KA   
Sbjct: 72  EEAEKTNAENTSAVATTSTEVEKAKAVLEQVTSESPLLAGLGQKELAKTEDATLAKAIED 131

Query: 188 STNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADP 245
           +      +      +  +  ++      V+ +   + ++L K T  G+ T AL    P
Sbjct: 132 AQTKLAAAKAILADSEATVEQVEAQVAAVKVANEALGNELQKYTVDGLLTAALDTVAP 189


>gi|90193563|gb|ABD92373.1| muramidase-released protein [Streptococcus suis]
          Length = 1256

 Score = 39.1 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 60/178 (33%), Gaps = 12/178 (6%)

Query: 80  YGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGG-SIALKAGTAGTMIAA 138
           YGT ++F    Y +G    +   +L++       +A   +     +IA     A T   A
Sbjct: 12  YGTKQQFSIRKYHFGAASVLLGVSLVLGAGAQVVKADETVASSEPTIASSVAPASTEAVA 71

Query: 139 KEA-------CTIAQATEKTAKLTALTKEGITSIRTIEGS----SVTIKSESIGTKASIS 187
           +EA        +    T    +      E +TS   +        +    ++   KA   
Sbjct: 72  EEAEKTNAENTSAVATTSTEVEKAKAVLEQVTSESPLLAGLGQKELAKTEDATLAKAIED 131

Query: 188 STNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADP 245
           +      +      +  +  ++      V+ +   + ++L K T  G+ T AL    P
Sbjct: 132 AQTKLAAAKAILADSEATVEQVEAQVAAVKVANEALGNELQKYTVDGLLTAALDTVAP 189


>gi|332249466|ref|XP_003273881.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein KIAA2026-like
            [Nomascus leucogenys]
          Length = 2101

 Score = 38.7 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 57/179 (31%), Gaps = 8/179 (4%)

Query: 118  NLVRGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEGITSIRTIEGSSVTIKS 177
            ++V            G  ++       + +    A+   L     TS R +   S  + S
Sbjct: 1640 SVVSAARAVNMLSVTGANLSLGSLSVTSASASGGARPPVLVSGNDTSSRIMPILSNRLCS 1699

Query: 178  ESIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWT 237
             S+G   +IS+  T   ++     TT         T  ++  ++      + ++P+ I T
Sbjct: 1700 SSLGNTVAISTVKTGHLASSVLISTTQPVVSPKCLTSALQIPVTVALPTPATTSPKIINT 1759

Query: 238  KALTKADPALESIYQRGKIFSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHS 296
               + A P        G   S ++        L   +  I   +P   N  +      S
Sbjct: 1760 VPHSAAVP--------GATRSVSLSKRQSRNSLQFQSPGISTTVPTNLNTNKPQTELSS 1810


>gi|257095134|ref|YP_003168775.1| methyl-accepting chemotaxis sensory transducer [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257047658|gb|ACV36846.1| methyl-accepting chemotaxis sensory transducer [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 721

 Score = 38.7 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 61/167 (36%), Gaps = 11/167 (6%)

Query: 54  STEQVIDISTKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPVVGYGA 113
           S++++ +I   + D+      +++ +    +    G  G G      +   L    G   
Sbjct: 546 SSQEIGEIVELISDITEQT--NVLALNAAIQAASAGEAGRGFTVVAEEVQRLAERSGEAT 603

Query: 114 RAAINLVRGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEGITSIRTIEGSSV 173
           +    +VR     ++  T  T+ A +E+    +   + A+L+    + +  I  +  +  
Sbjct: 604 KQIGAIVR----TIQTDTQDTVSAMEEST---RGVVEGARLSDAAGKALAEIGEVSQALT 656

Query: 174 TIKSESIGT--KASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEE 218
            +         + + S+T  A K      +T  +T    KT   V E
Sbjct: 657 ALIENIAAATRQQADSATKAARKMQEILLVTGQTTAGTEKTATAVGE 703


>gi|218848161|ref|YP_002454841.1| hypothetical protein BCG9842_0176 [Bacillus cereus G9842]
 gi|218546292|gb|ACK98685.1| membrane protein, putative [Bacillus cereus G9842]
          Length = 1562

 Score = 38.7 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 67/358 (18%), Positives = 111/358 (31%), Gaps = 50/358 (13%)

Query: 112 GARAAINLVRGGSIALKAGTAGTMIAAKEACTIAQATE----------KTAKLTALTKEG 161
           GA+    LV+GG I  K G    M +      + Q  E          K A +  L  +G
Sbjct: 406 GAKGLNGLVQGGVIGAKTGAKNAMESEFFKNLLNQQAEFDTNNWAKDNKDAFMNDLASKG 465

Query: 162 ITSIRTIEGSSVTIKSES--IGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEES 219
           IT  +  +  +  +  +     T+A  +       +  + K   +   E      V + +
Sbjct: 466 ITGNKAEKAWNQKLADQKKYFKTRAKEAYKQNGLAAFDTTKARASELAEEAANELVDQYA 525

Query: 220 ISKINSQLSKSTPQGIWTKALTKADPAL-------ESIYQRGKIFSNTIKNNAFIEKLAH 272
            +  N +  K +      K   +A+  +           +R +   NT K  + + K   
Sbjct: 526 NNTANKEAFKKSYLENTKKQGIEANDEMVDKAWNQHLGQKRQEFLGNTRKLASSLAKGKS 585

Query: 273 TTKAIDKK-IPFIGNQWRDINTAHSEFKMVPLSDQTLFRDFQGLCGKNI---------DN 322
               IDK+    + N+  D N    E           F+ F      N          D 
Sbjct: 586 LDSFIDKEAFTKLANKNYDGNLVEQE---------QAFKHFYKAKNPNATSKEVDSAWDE 636

Query: 323 QFILDLNRASFIFNGKKLARDN------SAEAIQKLMNQFAKNPKQLQLISSYANQSIFA 376
           Q  L  NR +   N K    +              +  QFA + K++       ++  F 
Sbjct: 637 QKDLMANRFAKGLNAKISNLNQTPYGTGQQALGSSMAKQFADDFKKMYANEENQHKGAFV 696

Query: 377 DSVVHLMQSIPEFAKYASKS--GSASKFTAKTLTNGEVAFTAKYTTKVQAVDKIAGKP 432
                L Q  PE  K   +       +     + NG     AK    V  VD +  K 
Sbjct: 697 K---KLKQEFPEMKKIEIERLWNEHVEEKYNDVLNGANK-VAKQLGTVPNVDNVLNKK 750


>gi|261819475|ref|YP_003257581.1| methyl-accepting chemotaxis sensory transducer [Pectobacterium
           wasabiae WPP163]
 gi|261603488|gb|ACX85974.1| methyl-accepting chemotaxis sensory transducer [Pectobacterium
           wasabiae WPP163]
          Length = 556

 Score = 38.7 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 38/230 (16%), Positives = 84/230 (36%), Gaps = 12/230 (5%)

Query: 78  PIYGT--YREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGGSIALKAGTAGTM 135
           P Y T   +E  +GN    I  A  D   L+  + +  ++   +V     + ++   G  
Sbjct: 223 PTYATQVTQEIAQGNLAIPINLATGDTTSLLSAMNHMRKSLSGIVEQVRESSESIATGAS 282

Query: 136 IAAKEACTIAQATEKTAK-LTALTKEGITSIRTIEGSSVTIKSESIGTKASISSTNTAEK 194
             A  +  ++Q TE+ A  L           +T+  +S T+++ +   +A+ ++     +
Sbjct: 283 QIAAGSTDLSQRTEEQAANLQQTAASMEEMSQTVRQNSDTVRNAAQLAQATSNTAAKGGE 342

Query: 195 S----AISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADPALESI 250
           +     I+ K  T+S+ +IG    V++    + N     +       +A    +      
Sbjct: 343 AVNNIVITMKEITDSSQKIGDIISVIDGIAFQTNILALNAA-----VEAARAGEQGRGFA 397

Query: 251 YQRGKIFSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSEFKM 300
              G++ S   ++    +++        KK+        D  T   E   
Sbjct: 398 VVAGEVRSLAQRSATAAKEIKELIGHSVKKVETGSALVSDAGTTIEELVR 447


>gi|310818491|ref|YP_003950849.1| DifA-like protein [Stigmatella aurantiaca DW4/3-1]
 gi|309391563|gb|ADO69022.1| DifA-like protein [Stigmatella aurantiaca DW4/3-1]
          Length = 452

 Score = 38.7 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 66/204 (32%), Gaps = 13/204 (6%)

Query: 43  HQVRELTQNKASTEQVIDISTKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDA 102
           HQV    +      +++D  T+V         +++ +  T    + G YG G      + 
Sbjct: 254 HQVFAFGEKTQEISKIVDAITQVAQQT-----NLLALNATIEAARAGEYGRGFAVVADEV 308

Query: 103 ALLIPVVGYGARAAINLVRG----GSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALT 158
             L    G  A     L R      +  + A   G    ++    +    +    +T   
Sbjct: 309 RKLAESAGRSAEQISKLARDISGQSTAVVSAMKEGIEELSEGREDLTNIVKYMGAITDTV 368

Query: 159 KEGITSIRTIEGSSVTIKSESIGTKASISSTNTAEKSAISQKITTNST-TEIGKTTEVVE 217
           ++G   +  I  SS   + +  G K  + +       A +   +T +  T I + T  V 
Sbjct: 369 RQGAEKVHLISESS---REQLEGRKEMVKAIEEISLVARNNAASTEAIQTVIQEQTSAVS 425

Query: 218 ESISKINSQLSKSTPQGIWTKALT 241
              S  N   + S       ++  
Sbjct: 426 RMTSLANELTNTSVELQSVVRSFR 449


>gi|110815982|gb|ABG91740.1| muramidase-released protein [Streptococcus suis]
          Length = 1256

 Score = 38.4 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 60/178 (33%), Gaps = 12/178 (6%)

Query: 80  YGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGG-SIALKAGTAGTMIAA 138
           YGT ++F    Y +G    +   +L++       +A   +     +IA     A T   A
Sbjct: 12  YGTKQQFSIRKYHFGAASVLLGVSLVLGAGAQVVKADETVASSEPTIASSVAPASTEAVA 71

Query: 139 KEA-------CTIAQATEKTAKLTALTKEGITSIRTIEGS----SVTIKSESIGTKASIS 187
           KEA        +    T    +      E +TS   +        +    ++   KA   
Sbjct: 72  KEAEKTNAENTSAVATTSTEVEKAKAVLEQVTSESPLLAGLGQKELAKTEDATLAKAIKD 131

Query: 188 STNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADP 245
           +      +      +  +  ++      V+ +   + ++L K T  G+ T AL    P
Sbjct: 132 AQTKLAAAKAILADSEATVEQVEAQVAAVKVANEALGNELQKYTVDGLLTAALDTVAP 189


>gi|163788287|ref|ZP_02182733.1| hypothetical protein FBALC1_07898 [Flavobacteriales bacterium
           ALC-1]
 gi|159876607|gb|EDP70665.1| hypothetical protein FBALC1_07898 [Flavobacteriales bacterium
           ALC-1]
          Length = 799

 Score = 38.4 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 67/398 (16%), Positives = 137/398 (34%), Gaps = 29/398 (7%)

Query: 27  KNISIVDK--TMDVLPLYHQVRELTQNKASTEQVIDISTKVKDVAVDVAVSMIPIYGTYR 84
           K +S V K  T   + + H V EL +   S +Q  + +T  + V     +          
Sbjct: 82  KTVSYVIKGDTHKAIQIEHHVEELDEVSVSGKQKKETNTAQETVLKSNTLKKYSSLNLGD 141

Query: 85  EFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGGSIALKAGTAGTMIA----AKE 140
             K+ +   G+    +  +++ P++  G  ++  L+   ++ L+    G   A       
Sbjct: 142 ALKEVS---GVSSINTGNSIVKPIIN-GMHSSRLLILNNNVRLQDQEWGIEHAPNIDINN 197

Query: 141 ACTIAQATEKTAKLTALTKEGITSIRTIEGSSVTIKSESIGTKASISSTNTAEKSAISQK 200
           A  I+    K +   A   + I  +  I+      K    G K ++S  +      ++  
Sbjct: 198 ASQISVI--KGSGALAYGGDAIGGVIVIKPGRTFTKDTLFG-KTTLSGQSNGRGFTVNS- 253

Query: 201 ITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADPALESIYQRG-KIFSN 259
            + N  TE G    V        + +            + + +    + I++ G ++F +
Sbjct: 254 -SLNKFTENGWFANVQGTLKHYGDFESPDYILSNTGLSSKSISFRGGKKIFESGFEVFYS 312

Query: 260 TIKNNAFIEKLAHT------TKAIDKKIPFIGNQWRDINTAHSEFKMVPLSDQTLFRDFQ 313
            I N   I + AHT        AI+   PFI N +        +     L     F+ F+
Sbjct: 313 YINNKIGILRAAHTGNGGDLANAINAPEPFIINDFTYDINPPRQEVTHHLFKAEYFKRFK 372

Query: 314 GLCGKNIDNQFILDLNRASFIF------NGKKLARDNSAEAIQKLMNQFAKNPKQLQLIS 367
                +I   +  +  R  F        N   +        +   M       +++ +  
Sbjct: 373 NFGKVDIQYDYQNN-RRLEFDIRRGERRNIAAVDLKLQTHTLLADMKLDTNLDRKINVGI 431

Query: 368 SYANQSIFADSVVHLMQSIPEFAKYASKSGSASKFTAK 405
               Q+ FA+    + + IP++ KY     + S++   
Sbjct: 432 MTRYQNNFANPDTGVRRLIPDYDKYDFGIYATSEWVLN 469


>gi|78186647|ref|YP_374690.1| glycosyl transferase, group 1 family protein [Chlorobium luteolum
           DSM 273]
 gi|78166549|gb|ABB23647.1| glycosyl transferase, group 1 family protein [Chlorobium luteolum
           DSM 273]
          Length = 361

 Score = 38.4 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 42/138 (30%), Gaps = 6/138 (4%)

Query: 253 RGKIFSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSEFKMVPLSDQTLFRDF 312
           R  +  +       IE+    +  I         ++R++    +E  ++ +S     ++F
Sbjct: 135 RAIVTVSEFSKAELIERFQLCSDDIFVVHNAARGEFRNVGALPAERFILAVSSINRQKNF 194

Query: 313 QGLCGKNIDNQFILDLNRASFIFNGKKLARDNSAEAIQKLMN---QFAKNPKQLQLISSY 369
             L         +       +I  G      +     +   N    F       +LIS Y
Sbjct: 195 HSLIQ---AFNRLKSAEVKLYIVGGFNRIFADPVLMAEVDGNPDIVFKGRVSDDELISLY 251

Query: 370 ANQSIFADSVVHLMQSIP 387
           +N   F     +    IP
Sbjct: 252 SNALCFVFPSFYEGFGIP 269


>gi|31559123|gb|AAP50254.1| muramidase-released protein [Streptococcus suis]
          Length = 1256

 Score = 38.4 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 60/178 (33%), Gaps = 12/178 (6%)

Query: 80  YGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGG-SIALKAGTAGTMIAA 138
           YGT ++F    Y +G    +   +L++       +A   +     +IA     A T   A
Sbjct: 12  YGTKQQFSIRKYHFGAASVLLGVSLVLGAGAQVVKADETVASSEPTIASSVAPAPTEAVA 71

Query: 139 KEA-------CTIAQATEKTAKLTALTKEGITSIRTIEGS----SVTIKSESIGTKASIS 187
           +EA        +    T    +      E +TS   +        +    ++   KA   
Sbjct: 72  EEAEKTNAENTSAVATTSTEVEKAKAVLEQVTSESPLLAGLGQKELAKTEDATLAKAIED 131

Query: 188 STNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADP 245
           +      +      +  +  ++      V+ +   + ++L K T  G+ T AL    P
Sbjct: 132 AQTKLAAAKAILADSEATVEQVEAQVAAVKVANEALGNELQKYTVDGLLTAALDTVAP 189


>gi|50123253|ref|YP_052420.1| methyl-accepting chemotaxis protein [Pectobacterium atrosepticum
           SCRI1043]
 gi|49613779|emb|CAG77230.1| methyl-accepting chemotaxis protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 556

 Score = 38.4 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 80/197 (40%), Gaps = 11/197 (5%)

Query: 78  PIYGT--YREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGGSIALKAGTAGTM 135
           P Y T   +E  +GN    I  A  D + L+  + +  ++   +V     + ++   G  
Sbjct: 223 PAYATQVTQEIAQGNLAIPIELAAGDTSSLLSAMNHMRKSLGGIVEQVRESSESIATGAG 282

Query: 136 IAAKEACTIAQATEKTAK-LTALTKEGITSIRTIEGSSVTIKSESIGTKASISSTNTAEK 194
             A  +  ++Q TE+ A  L           +T+  +S T+++ +   +A+ ++   + +
Sbjct: 283 QIAAGSTDLSQRTEEQAANLQQTAASMEEMSQTVRQNSDTVRNAAQLAQAASNTAAKSGE 342

Query: 195 S----AISQKITTNSTTEIGKTTEVVEESISKIN----SQLSKSTPQGIWTKALTKADPA 246
           +     ++ K  ++S+ +IG    V++    + N    +   ++   G   +        
Sbjct: 343 AVSNIVVTMKEISDSSHKIGDIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGE 402

Query: 247 LESIYQRGKIFSNTIKN 263
           + S+ QR    +  IK 
Sbjct: 403 VRSLAQRSATAAKEIKE 419


>gi|78356124|ref|YP_387573.1| methyl-accepting chemotaxis sensory transducer [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
 gi|78218529|gb|ABB37878.1| methyl-accepting chemotaxis sensory transducer [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
          Length = 690

 Score = 38.4 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 25/176 (14%), Positives = 65/176 (36%), Gaps = 8/176 (4%)

Query: 120 VRGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEGIT------SIRTIEGSSV 173
           +RG    +++ +      ++E    AQAT + A   A + E I+      +    + +S 
Sbjct: 383 LRGIVAEVQSASENVASGSEELSASAQATSQGATEQAASVEEISASVEEMASNIRQSASN 442

Query: 174 TIKSESIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQ 233
             ++E I  +A+  + +  +    +         +I    E+  ++     +   ++   
Sbjct: 443 AKQTEEIALRAAKDAQSGGQAVEQTVTAMKQIAEKISIIEEIARQTNLLALNAAIEAARA 502

Query: 234 GIWTKALTKADPALESIYQRGKIFSNTIK--NNAFIEKLAHTTKAIDKKIPFIGNQ 287
           G   K        +  + +R    +  I   +++ +E      + + + +P I N 
Sbjct: 503 GEHGKGFAVVAAEVRKLAERSGAAAGEISELSSSSVEIAERAGEMLRQIVPDIQNT 558


>gi|270008503|gb|EFA04951.1| hypothetical protein TcasGA2_TC015019 [Tribolium castaneum]
          Length = 684

 Score = 38.0 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 37/99 (37%), Gaps = 3/99 (3%)

Query: 318 KNIDNQFILDLNRASFIFNGKKLARDNSAEAIQKLMNQFAKNPKQLQLISSYANQSIFAD 377
            N+   +I D + A F+  G+  + +N  E   + +    ++   +Q I  Y N+ +  +
Sbjct: 66  TNLTQFYINDESEAGFVVEGENSSVNNLFEN-AECVQLVEEDTNDVQQIIYYTNEELSNE 124

Query: 378 SVV--HLMQSIPEFAKYASKSGSASKFTAKTLTNGEVAF 414
           +      +    +      + G+   F    L    + F
Sbjct: 125 AFTSVQDLTEESDIQGIQDEDGNIYPFKRIKLEGQMLNF 163


>gi|157871385|ref|XP_001684242.1| hypothetical protein [Leishmania major strain Friedlin]
 gi|68127310|emb|CAJ05586.1| conserved hypothetical protein [Leishmania major strain Friedlin]
          Length = 887

 Score = 38.0 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 62/191 (32%), Gaps = 9/191 (4%)

Query: 118 NLVRGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEGITSIRTIEGSSVTIKS 177
            +  GGS +  A             T A +  +     +   E          S+    S
Sbjct: 575 AMGNGGSASTGADVTSVFFTMSSPTTSAPSLRRCLAFGSDHDESDAE------SARAPHS 628

Query: 178 ESIGTKASISSTNTAEKSAISQKITTNSTTEIG---KTTEVVEESISKINSQLSKSTPQG 234
           E  G  A+ SS +  ++S      T ++  ++      T VV  +               
Sbjct: 629 EKRGRVAASSSMHMGDRSCKEAPQTVSAARDMPLPRTPTRVVTATDILATITALPRPSSS 688

Query: 235 IWTKALTKADPALESIYQRGKIFSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTA 294
             + +L    P     ++ GK    T K NA   +   T + + K+    G++W  I+  
Sbjct: 689 SSSSSLRLKRPTARRAHRGGKDTGATGKVNASPAEGQPTHRGVCKRRRGRGDEWGRIDVN 748

Query: 295 HSEFKMVPLSD 305
                 +PL+ 
Sbjct: 749 DEVLAAMPLAG 759


>gi|281495048|gb|ADA72191.1| AnkA [Anaplasma phagocytophilum]
          Length = 1459

 Score = 38.0 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 57/158 (36%), Gaps = 15/158 (9%)

Query: 121  RGGSIALKAGTAGTMIAA---KEACTIAQATEKTAKLTALTKE----GITSIRTIEGSSV 173
            +    A K  T+     +   KE    A   +   K  A  KE    G+ S+    G +V
Sbjct: 1063 KKSDAAQKEATSSETTTSADPKEEPIYATVKKGPKKSDATKKEATSPGVESVYATAGVAV 1122

Query: 174  TIKSESIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQ 233
            T     +G +   S +  A+  A  +  ++ +TT      E +  ++ K   +   +  +
Sbjct: 1123 T-SETQVGER---SESIYADPFAGERAASSETTTSADPKEEPIYATVKKGPKKSDAAQKE 1178

Query: 234  GIWTKALTKADPALESIY----QRGKIFSNTIKNNAFI 267
               ++  T ADP  E IY    +  K    T K     
Sbjct: 1179 ATSSETTTSADPKEEPIYATVKKGPKKSDATKKEATSP 1216


>gi|281495046|gb|ADA72190.1| AnkA [Anaplasma phagocytophilum]
          Length = 1459

 Score = 38.0 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 57/158 (36%), Gaps = 15/158 (9%)

Query: 121  RGGSIALKAGTAGTMIAA---KEACTIAQATEKTAKLTALTKE----GITSIRTIEGSSV 173
            +    A K  T+     +   KE    A   +   K  A  KE    G+ S+    G +V
Sbjct: 1063 KKSDAAQKEATSSETTTSADPKEEPIYATVKKGPKKSDATKKEATSPGVESVYATAGVAV 1122

Query: 174  TIKSESIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQ 233
            T     +G +   S +  A+  A  +  ++ +TT      E +  ++ K   +   +  +
Sbjct: 1123 T-SETQVGER---SESIYADPFAGERAASSETTTSADPKEEPIYATVKKGPKKSDAAQKE 1178

Query: 234  GIWTKALTKADPALESIY----QRGKIFSNTIKNNAFI 267
               ++  T ADP  E IY    +  K    T K     
Sbjct: 1179 ATSSETTTSADPKEEPIYATVKKGPKKSDATKKEATSP 1216


>gi|197117190|ref|YP_002137617.1| methyl-accepting chemotaxis sensory transducer [Geobacter
           bemidjiensis Bem]
 gi|197086550|gb|ACH37821.1| methyl-accepting chemotaxis sensory transducer [Geobacter
           bemidjiensis Bem]
          Length = 541

 Score = 38.0 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 72/204 (35%), Gaps = 17/204 (8%)

Query: 94  GIVGAISDAALLIPVVGYGARAAINLVRGGSIALKAGTAGTMIAAKEACTIAQATEKTAK 153
           GI+G +SD++          + A    +  S A++  T    +A++       + E  A 
Sbjct: 261 GILGQVSDSST---------QIAAASSQLQSTAVQIATGAEEVASQTGSVATASEEMAAT 311

Query: 154 LTALTKEGITSIRTIEGSSVTIKSESIGTKASISSTNTAEKSAISQKITTNSTTEIGKTT 213
              + +  + +  T   SS +        + +I+      + A   K +  +   +G+ +
Sbjct: 312 SGDIAQNCVLAAETSRQSSDSANEGGAVVQETIAG---MARIAERVKDSARTVESLGERS 368

Query: 214 EVVEESISKINSQLSKSTPQGIWTKALTKADPALESIYQRGKIFSNTIKNNAFIEKLAHT 273
           E + + I     +  +         AL  A  A  +  Q         +  A  E+    
Sbjct: 369 EQIGDII-----ETIQDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAERTTKA 423

Query: 274 TKAIDKKIPFIGNQWRDINTAHSE 297
           TK I   I  I ++ +   +A  E
Sbjct: 424 TKEIGAMIKAIQDETKAAVSAMEE 447


>gi|330980781|gb|EGH78884.1| filamentous hemagglutinin family protein [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 829

 Score = 38.0 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 37/252 (14%), Positives = 79/252 (31%), Gaps = 27/252 (10%)

Query: 51  NKASTEQVIDISTK-------VKDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAA 103
           N+ S  Q ID   K       +KD      +    +   +  FK  N G G    I  A 
Sbjct: 383 NQQSVSQSIDAMVKADPQLAWIKDAEKRGDIDWRQVKEIHESFKYDNSGLGPAAQIVVAI 442

Query: 104 LLIPVVGYGARAAINLVRGGSIALKAGTAGTMIAAKEACTIAQATEK---TAKLTALTKE 160
           L+  V+G         + GG++A    T            +    +    ++ +      
Sbjct: 443 LMAAVMGPAGFGLSAGI-GGAVATSVATTAVTSTINNKGDLGAVFKDVTSSSAIKGYAMA 501

Query: 161 GITS--------------IRTIEGSSVTIKSESIGTKASISST--NTAEKSAISQKITTN 204
           G+ +              + +++  +  + +ES+   A +  +  +    S +S  I T 
Sbjct: 502 GVMAGFVPTINPKNLGLDLASVQTVATKVITESVIKTAIMGGSFKDNLGSSIVSTGIATG 561

Query: 205 STTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADPALESIYQRGKIFSNTIKNN 264
                GK  +       K+      +   G+ ++A+              ++  + +   
Sbjct: 562 GAIAAGKIGDFTLFDEGKLTKVGMHAVLGGLMSEAMGGDFRTGALAAGANEMVVDYLAQR 621

Query: 265 AFIEKLAHTTKA 276
                L   ++A
Sbjct: 622 MLPSDLGKNSQA 633


>gi|306828499|ref|ZP_07461694.1| beta-N-acetylhexosaminidase [Streptococcus mitis ATCC 6249]
 gi|304429298|gb|EFM32383.1| beta-N-acetylhexosaminidase [Streptococcus mitis ATCC 6249]
          Length = 1343

 Score = 38.0 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 51/306 (16%), Positives = 93/306 (30%), Gaps = 29/306 (9%)

Query: 157 LTKEGITSIRTIEGSSVTIKSESIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVV 216
           +  +GIT   T E +  T++        +  S    +    + K       E  +    V
Sbjct: 32  VAADGITPAPTAEETVQTVQESPQTPDETGESKVPEKLEEKADKPVKEEVKEDQEAPRTV 91

Query: 217 EESISKINSQLSKSTPQGIWTKALTKADPALESIYQRGKIFSNTIKNNAFI----EKLAH 272
                +  +           T       P   S         N     A      E+ A 
Sbjct: 92  APKTEETTAPAVTENATPTPTAEKESPAPTEVSAENTSSEKKNEATTPAVTTPNTERAAQ 151

Query: 273 TTKAIDKKIPFIGNQWRDINTAHSEFKMVPLSDQTLFRDFQGLCGKNIDNQFILDLNRAS 332
             + + K+     +  R   +     +++  +    + D   L G +   +F+LD    +
Sbjct: 152 VNEKLAKRKMISIDAGRKYFSPEQLKEIIDKAKHYGYTDLHLLVGND-GMRFMLD--DMT 208

Query: 333 FIFNGKKLARDNSAEAIQKLMNQFAKNP--------KQLQLISSYANQSI---------- 374
              NGK  A D+   A++   + + K+P        +   LI+   N+ I          
Sbjct: 209 IKANGKTYASDDVKRALENGTDAYYKDPNGNHLTESQMTDLINYAKNKGIGLIPTVNSPG 268

Query: 375 FADSVVHLMQSI----PEFAKYASKSGSASKFTAKTLTNGEVAFTAKYTTKVQAVDKIAG 430
             D+++H M+ +    P F  +  +S        K       A   KY         I  
Sbjct: 269 HMDAILHAMKELGIQKPNFNYFGKESARTVDLDNKEAVEFTKALIDKYAAYFAGKSDIFN 328

Query: 431 KPLKEY 436
             L EY
Sbjct: 329 IGLDEY 334


>gi|90193561|gb|ABD92372.1| muramidase-released protein [Streptococcus suis]
          Length = 1256

 Score = 38.0 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 60/178 (33%), Gaps = 12/178 (6%)

Query: 80  YGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGG-SIALKAGTAGTMIAA 138
           YGT ++F    Y +G    +   +L++       +A   +     +IA     A T   A
Sbjct: 12  YGTKQQFSIRKYHFGAASVLLGVSLVLGAGAQVVKADETVASSEPTIASSVAPASTEAVA 71

Query: 139 KEA-------CTIAQATEKTAKLTALTKEGITSIRTIEGS----SVTIKSESIGTKASIS 187
           +EA        +    T    +      E +TS   +        +    ++   KA   
Sbjct: 72  EEAEKTNAENTSAVATTSTEVEKAKAVLEQVTSESPLLAGLGQKELAKTEDATLAKAIED 131

Query: 188 STNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADP 245
           +      +      +  +  ++      V+ +   + ++L + T  G+ T AL    P
Sbjct: 132 AQTKLAAAKAILADSEATVEQVEAQVAAVKVANEALGNELQEYTVDGLLTAALDTVAP 189


>gi|66813698|ref|XP_641028.1| SAP DNA-binding domain-containing protein [Dictyostelium discoideum
           AX4]
 gi|74855709|sp|Q54UV9|Y0787_DICDI RecName: Full=UPF0746 protein DDB_G0280787
 gi|60469054|gb|EAL67051.1| SAP DNA-binding domain-containing protein [Dictyostelium discoideum
           AX4]
          Length = 936

 Score = 38.0 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 1/110 (0%)

Query: 275 KAIDKKIPFIGNQWRDINTAHSEFKMVPLSDQTLFRDFQ-GLCGKNIDNQFILDLNRASF 333
           +++DK    + N+W   +  H  F    L D  + ++ +  L    +DN+++        
Sbjct: 455 ESVDKMYERVVNKWNGRSFDHQLFFQSILKDINIEKNEKFELISNVLDNKYVKTFKEYDH 514

Query: 334 IFNGKKLARDNSAEAIQKLMNQFAKNPKQLQLISSYANQSIFADSVVHLM 383
               K +   N  E I   +    + P ++Q I+ Y N      +  +L+
Sbjct: 515 YIFFKAVFSSNDIELIDYFLKILMQQPNKIQKITRYPNIGKLIGNYCNLI 564


>gi|218778005|ref|YP_002429323.1| hypothetical protein Dalk_0145 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218759389|gb|ACL01855.1| hypothetical protein Dalk_0145 [Desulfatibacillum alkenivorans
           AK-01]
          Length = 1078

 Score = 38.0 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 36/207 (17%), Positives = 73/207 (35%), Gaps = 8/207 (3%)

Query: 94  GIVGAISDAALLIPVVGYGARAAINLVRGGSIALKAGTAGTMIAAKEACTIAQATEKTAK 153
           G VG  +D    +  V    +AA +L  G  I                   +      + 
Sbjct: 596 GNVGVGTDEPSEMLDVAGNIKAAGDLYAGADIHADGDINAGANIHATGSITSSGMNIGSD 655

Query: 154 LTALTKEGITSIRTIEGS---SVTIKSESIGTKASISSTNTAEKSAISQKITTNSTTEIG 210
            T L  + +   +  EG+   S ++++ ++G+K+  ++T  ++ +A+  +  T +TT  G
Sbjct: 656 NTQLGHQAL--FKNGEGATLDSESVENTAVGSKSLYANTTGSQNTAVGMETLTANTTGAG 713

Query: 211 KTTEVVEESISKINSQLSKSTPQGIWTKALTKADP---ALESIYQRGKIFSNTIKNNAFI 267
            T+       S      +        T   T  D      +S Y     ++  + + +  
Sbjct: 714 NTSTGAYSLESNTEGDRNTGLGAFALTSNTTAEDNTSVGYKSAYHLNGSYNAALGSLSLY 773

Query: 268 EKLAHTTKAIDKKIPFIGNQWRDINTA 294
              + T  +         N+  D NTA
Sbjct: 774 STSSGTYNSAFGYSSLFLNETGDENTA 800


>gi|126208263|ref|YP_001053488.1| hypothetical protein APL_0785 [Actinobacillus pleuropneumoniae L20]
 gi|126097055|gb|ABN73883.1| hypothetical protein APL_0785 [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
          Length = 663

 Score = 37.6 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 78/204 (38%), Gaps = 20/204 (9%)

Query: 262 KNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSEFKMVPLSDQTLFRDFQGLCGKN-- 319
           K    I+KL    + I +KI     Q  +I T  S ++ + +   +LF     L  K   
Sbjct: 385 KIRQEIKKLNIKIREI-QKIKKQLEQNNNIKTEKSRYEQILMIKASLFSMLDILAKKQSG 443

Query: 320 -IDNQFILDLNRASFIFNGKKLARDNSAEAIQKLMNQFAKNPKQL--QLISSYANQSIFA 376
            ++   I +L       N K +  DN+ +          K+ +    +++S       F 
Sbjct: 444 KLEENNIDELQSILNGINTKLINYDNNKKL---------KDAETRIKEIMSDLGKNFEFE 494

Query: 377 DSV--VHLMQSIPEFAKYASKSGSASKFTAKTLTNGEVAFTAKYTTKVQAVDKIAGKP-L 433
           DS   ++L  S+  F  Y     +   +  +++ +G   +   + T   A+ +   +   
Sbjct: 495 DSYHPINLNFSLNSFDLYHINESNDRIY-LRSMGSGA-NWLYSHLTLFLALHQYFIELES 552

Query: 434 KEYGLKISGILSPDKATELQRSFY 457
           + Y   I  IL  D+ T++    +
Sbjct: 553 RNYKCCIPSILFLDQPTQVYFPNF 576


>gi|53728999|ref|ZP_00348290.1| COG0419: ATPase involved in DNA repair [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
          Length = 420

 Score = 37.6 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 78/204 (38%), Gaps = 20/204 (9%)

Query: 262 KNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSEFKMVPLSDQTLFRDFQGLCGKN-- 319
           K    I+KL    + I +KI     Q  +I T  S ++ + +   +LF     L  K   
Sbjct: 142 KIRQEIKKLNIKIREI-QKIKKQLEQNNNIKTEKSRYEQILMIKASLFSMLDILAKKQSG 200

Query: 320 -IDNQFILDLNRASFIFNGKKLARDNSAEAIQKLMNQFAKNPKQL--QLISSYANQSIFA 376
            ++   I +L       N K +  DN+ +          K+ +    +++S       F 
Sbjct: 201 KLEENNIDELQSILNGINTKLINYDNNKKL---------KDAETRIKEIMSDLGKNFEFE 251

Query: 377 DSV--VHLMQSIPEFAKYASKSGSASKFTAKTLTNGEVAFTAKYTTKVQAVDKIAGKP-L 433
           DS   ++L  S+  F  Y     +   +  +++ +G   +   + T   A+ +   +   
Sbjct: 252 DSYHPINLNFSLNSFDLYHINESNDRIY-LRSMGSGA-NWLYSHLTLFLALHQYFIELES 309

Query: 434 KEYGLKISGILSPDKATELQRSFY 457
           + Y   I  IL  D+ T++    +
Sbjct: 310 RNYKCCIPSILFLDQPTQVYFPNF 333


>gi|242015512|ref|XP_002428397.1| conserved hypothetical protein [Pediculus humanus corporis]
 gi|212513009|gb|EEB15659.1| conserved hypothetical protein [Pediculus humanus corporis]
          Length = 3297

 Score = 37.6 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 60/311 (19%), Positives = 111/311 (35%), Gaps = 39/311 (12%)

Query: 138 AKEACTIAQATEKTAKLTALTKEGITSIRTIEGSSVTIK----SESIGTKASISSTNTAE 193
           + E   I  AT+KT K + ++    + +    G S   K    S +I  K   S   T  
Sbjct: 14  SSEKKNITSATKKTVKNSEVSSTIKSIVGESNGKSSVSKEIGKSVNISKKLHQSDFRTIT 73

Query: 194 KSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADPALESIYQR 253
           KS ++++  T+ST  I K    V++  S  +    +   Q    K++     + E+I   
Sbjct: 74  KSTVNREFATSST--ISKKESSVKQFESFNSKLSQRKAHQNFTHKSVAINSNSKENI--- 128

Query: 254 GKIFSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSEFKMVPLSDQTLFRDFQ 313
             + + TIKNN  +  + H  +     +    N   +IN   S   +   S  T  + F 
Sbjct: 129 --VRNATIKNNN-MALIEHGNQESTISLRNDSNIIANINEFRSNTSVSSSSINTSEKIFS 185

Query: 314 GLCGKNIDNQFILDLNRASFIFNGKKLARD----------NSAEAIQKLMNQFAKNPKQL 363
            +    +      D ++     N KK+              S    + +   F  +  + 
Sbjct: 186 KINSVALTED---DFSQDE---NNKKIVATLYHIEPIISEQSLNQNESIQETFTSDISKR 239

Query: 364 QLISSYANQSIFADSVVHLMQSIPEFAKYASKSGSASKFTAKTLTNGEVAFTAKYTTKVQ 423
           ++IS   NQ        H + S  E  +             +   + +    +K T +V 
Sbjct: 240 EVIS--MNQ-------THQVSSHRENNEQIFVVDEVD--DVRFFEDRQQNLFSKSTNEVT 288

Query: 424 AVDKIAGKPLK 434
           AV + +   L+
Sbjct: 289 AVSEKSKTYLR 299


>gi|146320602|ref|YP_001200313.1| hypothetical protein SSU98_0755 [Streptococcus suis 98HAH33]
 gi|145691408|gb|ABP91913.1| MRP [Streptococcus suis 98HAH33]
          Length = 429

 Score = 37.6 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 60/178 (33%), Gaps = 12/178 (6%)

Query: 80  YGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGG-SIALKAGTAGTMIAA 138
           YGT ++F    Y +G    +   +L++       +A   +     +IA     A T   A
Sbjct: 12  YGTKQQFSIRKYHFGAASVLLGVSLVLGAGAQVVKADETVASSEPTIASSVAPASTEAVA 71

Query: 139 KEA-------CTIAQATEKTAKLTALTKEGITSIRTIEGS----SVTIKSESIGTKASIS 187
           +EA        +    T    +      E +TS   +        +    ++   KA   
Sbjct: 72  EEAEKTNAENTSAVATTSTEVEKAKAVLEQVTSESPLLAGLGQKELAKTEDATLAKAIED 131

Query: 188 STNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADP 245
           +      +      +  +  ++      V+ +   + ++L K T  G+ T AL    P
Sbjct: 132 AQTKLAAAKAILADSEATVEQVEAQVAAVKVANEALGNELQKYTVDGLLTAALDTVAP 189


>gi|329666726|gb|AEB92674.1| putative restriction endonuclease [Lactobacillus johnsonii DPC 6026]
          Length = 1562

 Score = 37.6 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 72/195 (36%), Gaps = 28/195 (14%)

Query: 198  SQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADPALESIYQRGKIF 257
            S ++  N   E+ K     +   +K N ++S       W+  L K     ++I   GK  
Sbjct: 1233 SLRMIRNYNAEVAKLKRDPKYIATKDNQKIS-------WSDELKKKYKKGQTISFIGKKS 1285

Query: 258  SNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSEFKMVPLSDQTLFRDFQGLCG 317
               +    F +K  +    +DK+I      W++ NT   EF  + +  ++  R F  L  
Sbjct: 1286 LVKVLFRPFTKKYLY----LDKEIIARPGNWKEYNT---EFPTIIIPGKSNRRSFSALVA 1338

Query: 318  KNIDNQFILDLNRASFIFNGKKLARDNSAEAIQKLMNQFAKNPKQLQLISSYANQSIFAD 377
                +Q I+D    +F  N            +  + N  A   K+L L     N      
Sbjct: 1339 NVPIDQNIMDAGAQTFCIN--------QNHGLFNVENIDANLVKKLGL-----NNKDLM- 1384

Query: 378  SVVHLMQSIPEFAKY 392
              ++ + + P + KY
Sbjct: 1385 PYIYSLLNSPIYKKY 1399


>gi|290987463|ref|XP_002676442.1| predicted protein [Naegleria gruberi]
 gi|284090044|gb|EFC43698.1| predicted protein [Naegleria gruberi]
          Length = 659

 Score = 37.6 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 1/63 (1%)

Query: 267 IEKLAHTTKAIDKKIPFIGNQWRDINTAHSE-FKMVPLSDQTLFRDFQGLCGKNIDNQFI 325
              L H ++ + +   F+   W D    H+  +K +PL D +  +DF  +  +  D +++
Sbjct: 367 PTFLKHASEELLQDSSFMTKYWEDFCNLHARFYKSLPLIDLSWLQDFNFMNQRKKDEEYM 426

Query: 326 LDL 328
           + L
Sbjct: 427 ISL 429


>gi|168002960|ref|XP_001754181.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694735|gb|EDQ81082.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1097

 Score = 37.6 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 60/150 (40%), Gaps = 14/150 (9%)

Query: 94  GIVGAISDAALLIPVVGYGARAAINLVRGGSIALKAGTAGTMIAAKEACTIAQATEKTAK 153
            +VG +   A   PV+  G R  + +V    +A + G  GT     E+        +++ 
Sbjct: 748 AVVGGVIPEATDAPVIASGGRQELTVVEESKVAAQVGEEGTETVLDES-----RQSESSA 802

Query: 154 LTALTKEGITSIRTIEGSSVTIKSESIGTKASISS-------TNTAEKSAISQKITTNST 206
            T   +  I +  T +    T++SE  G KA  ++         T++  A+    T +  
Sbjct: 803 KTKPPEISIGAESTAQEERTTVQSE--GPKALHTTPVRVSPRHKTSKVDAVPFSATPSFA 860

Query: 207 TEIGKTTEVVEESISKINSQLSKSTPQGIW 236
           T     +  +  +  + +S +   TP+G +
Sbjct: 861 TPCEPASSGILRARHRRSSSVGNLTPRGPF 890


>gi|168185552|ref|ZP_02620187.1| conserved hypothetical protein [Clostridium botulinum C str.
           Eklund]
 gi|169296456|gb|EDS78589.1| conserved hypothetical protein [Clostridium botulinum C str.
           Eklund]
          Length = 563

 Score = 37.2 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 32/203 (15%), Positives = 68/203 (33%), Gaps = 9/203 (4%)

Query: 168 IEGSSVTIKSESI-----GTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISK 222
           +EG +  +  E++       K   S  N  ++   SQ  T  + T        V+E    
Sbjct: 302 VEGENKNLSEENVNLKEISPKELQSENNNIQEKINSQDKTVETKTTTNSAETKVDEQYKG 361

Query: 223 INSQLSKSTPQGIWTKALTKADPALESIYQRGKIFSNTIKN--NAFIEKLAHTTKAIDKK 280
             +Q+ K     +  K +  A    E I  +       IK+      E+ +     + + 
Sbjct: 362 QEAQIEKKVLDKLNNKPVEIAKNVKEQIENKTNEMKQIIKHVLGENSERDSSILGKVFQS 421

Query: 281 IPFIGNQWRDINTAHSEFKM--VPLSDQTLFRDFQGLCGKNIDNQFILDLNRASFIFNGK 338
           +    N ++  N+  +++    VP++        + +   +  N   +D     F    K
Sbjct: 422 LQGKMNDFKVFNSLSNQYYYLDVPVNVNEQQYPCKLIIKDDRKNGKKIDSTNVKFAVCVK 481

Query: 339 KLARDNSAEAIQKLMNQFAKNPK 361
            +        I+ + +    N K
Sbjct: 482 TINMGVVDAYIKVMNSNININIK 504


>gi|319440807|ref|ZP_07989963.1| hypothetical protein CvarD4_03478 [Corynebacterium variabile DSM
           44702]
          Length = 1541

 Score = 37.2 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 40/193 (20%), Positives = 73/193 (37%), Gaps = 17/193 (8%)

Query: 55  TEQVIDISTKVKDVAV---DVAVSMIP-IYGTYREFK-KGNYGWGIVGAISDAALLIPVV 109
           T+++ D++ + +       +VA   IP +       K      W +V  I D A+ IP  
Sbjct: 363 TDKIDDLAPQAEAAGAKLSEVAQGAIPHVKAALDTLKGSAETAWPVVQKIGDVAMGIPWQ 422

Query: 110 GYGARAAINLVR--GGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEGITSIRT 167
            Y    A+ + +  G + AL +G+        E      A ++  +   +    I ++ T
Sbjct: 423 AYAGVIAMAVSKHQGLTGALSSGSGKFKTFTTEVAANRAAMQQQGQQIGVVSAAIQTLGT 482

Query: 168 IEGSSVTIKSESIG--TKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINS 225
                   KS +IG  + A  S++       +  K     TT +G+  + V+  +S    
Sbjct: 483 --------KSSTIGKMSSAFQSASTPLRVMGMDAKDAAKQTTGLGRAAKTVKGGLSSFGG 534

Query: 226 QLSKSTPQGIWTK 238
            LS S   G    
Sbjct: 535 VLSGSVAGGFSLA 547


>gi|88803716|ref|ZP_01119240.1| putative alkaline phosphatase [Polaribacter irgensii 23-P]
 gi|88780449|gb|EAR11630.1| putative alkaline phosphatase [Polaribacter irgensii 23-P]
          Length = 546

 Score = 37.2 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 65/191 (34%), Gaps = 16/191 (8%)

Query: 178 ESIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWT 237
            ++G  +  + T  +    IS       + +     +         N  +   +P+ + T
Sbjct: 78  TAVGHTSIFTGTTPSNHGIISNYWYDKYSKQNIYCVDDTSYKTVGNNGTVGAKSPKKMLT 137

Query: 238 KALTKADPALESIYQRGKIFSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSE 297
             ++  D    +   RGK    +IK+ A I  + HT  A         NQW       S 
Sbjct: 138 TTIS--DELHLAQNMRGKTIGISIKDRAAILPVGHTANAAYWYDAGDKNQW-----ITSS 190

Query: 298 FKMVPLSDQTLFRDFQGLCGKNIDNQFILDLNRASFIFNGKKLARDNSA----EAIQKLM 353
           + M     Q L +  Q    KN  N ++ D     +       +R ++         +  
Sbjct: 191 YYM-----QKLPKWVQEFNTKNKANSYLNDTWNTLYDIKTYTQSRSDNNVFERNLKGQEK 245

Query: 354 NQFAKNPKQLQ 364
             F K+ K+L+
Sbjct: 246 PTFPKDLKKLR 256


>gi|146295740|ref|YP_001179511.1| hypothetical protein Csac_0701 [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145409316|gb|ABP66320.1| hypothetical protein Csac_0701 [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 473

 Score = 37.2 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 51/129 (39%), Gaps = 2/129 (1%)

Query: 177 SESIGTKASISSTNTAE-KSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGI 235
           +E  G+K S S  +T+  ++  +    + S T+   T  V     + I    S  +P  I
Sbjct: 335 TEGQGSKESRSENSTSNGQNNNNLPAGSGSQTQTDNTQNVGSGLGAAIPRTSSLVSPPQI 394

Query: 236 WTKALTKADPALESIYQRGKIFSNTIKNNAFIEKLAHTT-KAIDKKIPFIGNQWRDINTA 294
           +TK L     + +++   GK    T++     E+       ++  +     N++ + +  
Sbjct: 395 FTKNLHDIKASNQAVLNTGKESGKTVQKEGIGERGQKVNFSSVFSEYKKEANEYLETDEV 454

Query: 295 HSEFKMVPL 303
            +  K +  
Sbjct: 455 PAWAKEITK 463


>gi|115372852|ref|ZP_01460157.1| DifA protein [Stigmatella aurantiaca DW4/3-1]
 gi|115370119|gb|EAU69049.1| DifA protein [Stigmatella aurantiaca DW4/3-1]
          Length = 389

 Score = 37.2 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 66/204 (32%), Gaps = 13/204 (6%)

Query: 43  HQVRELTQNKASTEQVIDISTKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDA 102
           HQV    +      +++D  T+V         +++ +  T    + G YG G      + 
Sbjct: 191 HQVFAFGEKTQEISKIVDAITQVAQQT-----NLLALNATIEAARAGEYGRGFAVVADEV 245

Query: 103 ALLIPVVGYGARAAINLVRG----GSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALT 158
             L    G  A     L R      +  + A   G    ++    +    +    +T   
Sbjct: 246 RKLAESAGRSAEQISKLARDISGQSTAVVSAMKEGIEELSEGREDLTNIVKYMGAITDTV 305

Query: 159 KEGITSIRTIEGSSVTIKSESIGTKASISSTNTAEKSAISQKITTNST-TEIGKTTEVVE 217
           ++G   +  I  SS   + +  G K  + +       A +   +T +  T I + T  V 
Sbjct: 306 RQGAEKVHLISESS---REQLEGRKEMVKAIEEISLVARNNAASTEAIQTVIQEQTSAVS 362

Query: 218 ESISKINSQLSKSTPQGIWTKALT 241
              S  N   + S       ++  
Sbjct: 363 RMTSLANELTNTSVELQSVVRSFR 386


>gi|118400039|ref|XP_001032343.1| conserved hypothetical protein [Tetrahymena thermophila]
 gi|89286683|gb|EAR84680.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
          Length = 730

 Score = 36.8 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 44/251 (17%), Positives = 91/251 (36%), Gaps = 26/251 (10%)

Query: 173 VTIKSESIGTKASISSTNTA-EKSAISQKITTNSTTEIGKTT-EVVEESISKINSQLSKS 230
            T  +E IG    I     +   S + + I+   T +I +++ + V  S  +   +  + 
Sbjct: 488 STKDNEPIGQMKIIKVNQNSLNNSQVKEGISLIDTRKINQSSIKRVNTSQVQSYLKQLEY 547

Query: 231 TPQGIWTKALTKADPALESIYQRGKIFSNTIKNNAFIEKLAHTTKAIDKKIPFIGN--QW 288
             +GI  K   K  P   S+   G I+S+  K   F   +  +++++D++I +  N    
Sbjct: 548 KNRGISIKQSLKLVPNCTSLI-AGVIYSSPQKYQQFPTNMISSSQSLDQQINYFQNNVNQ 606

Query: 289 RDINTAHSEFKMVPLSDQTLFRDFQGLCGKNIDNQFILDLNRASFIFNGKKLARDNSAEA 348
           R   T  +E  + P     LF       G N     + D++        +    +     
Sbjct: 607 RSTQTIKTETNLSPKL---LFD------GPNPHENIVFDVSTPFVGKQSRLANNNTKNNV 657

Query: 349 IQKLMNQF-----AKNPKQL--QLISSY----ANQSIFADSVVHLMQSIPEFAKYASKS- 396
                ++F          +   QL  S+    + +  F +  +  +Q    +  Y SK  
Sbjct: 658 FNDEFDEFKDFVIEDEVSKRNSQLYESFDQQNSQEKSFKNESIKKVQQTQSYLFYCSKQL 717

Query: 397 GSASKFTAKTL 407
            +  ++  + L
Sbjct: 718 ENWYEYQIQKL 728


>gi|108762581|ref|YP_634813.1| methyl-accepting chemotaxis protein DifA [Myxococcus xanthus DK
           1622]
 gi|18030053|gb|AAL56592.1|AF449411_13 DifA protein [Myxococcus xanthus DK 1622]
 gi|3342523|gb|AAC27628.1| defective in fruiting DifA [Myxococcus xanthus]
 gi|108466461|gb|ABF91646.1| methyl-accepting chemotaxis protein DifA [Myxococcus xanthus DK
           1622]
          Length = 413

 Score = 36.8 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 57/175 (32%), Gaps = 9/175 (5%)

Query: 55  TEQVIDISTKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPVVGYGAR 114
           T+++  I   +  VA     +++ +  T    + G YG G      +   L    G  A 
Sbjct: 224 TQEISKIVDAITQVAQQT--NLLALNATIEAARAGEYGRGFAVVADEVRKLAESAGRSAE 281

Query: 115 AAINLVRGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEGITSIRTIEGSSVT 174
               L R            T + +     IA+  E    LT + +       TI   S  
Sbjct: 282 QISKLAR------DISGQSTSVVSAMKEGIAELAEGREDLTNIVRSMGAITDTIRKGSEK 335

Query: 175 IKSESIGTKASISSTNTAEKSAISQK-ITTNSTTEIGKTTEVVEESISKINSQLS 228
           +   S   +  +  +     +    K +  N+ +       V++E  + ++   S
Sbjct: 336 VHLISESAREQLKGSEEMVTAIEEIKLVARNNASSTEAIQAVIQEQTAAVSRMTS 390


>gi|302023671|ref|ZP_07248882.1| hypothetical protein Ssui0_03341 [Streptococcus suis 05HAS68]
 gi|225624915|gb|ACN96566.1| muramidase-released protein [Streptococcus suis]
 gi|225624987|gb|ACN96595.1| muramidase-released protein [Streptococcus suis]
          Length = 1132

 Score = 36.8 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 78/237 (32%), Gaps = 22/237 (9%)

Query: 80  YGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGG-SIALKAGTAGTMIAA 138
           YGT ++F    Y +G    +   +L++       +A   +     +IA     A T   A
Sbjct: 12  YGTKQQFSIRKYHFGAASVLLGVSLVLGAGTQVVKAEEAVTSSEPTIASSVAPASTEAVA 71

Query: 139 KEA-CTIAQAT----EKTAKLTALTKEGITSIRTIEGSSV-------------TIKSESI 180
           +E   T A+AT    E T+ +   + E   +   +E  +                  ++ 
Sbjct: 72  EEVDKTNAEATLVPAENTSAVATTSTEVEKAKAVLEQVTSESPLLAGLGQKELAKTEDAT 131

Query: 181 GTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKAL 240
             KA   +      +      +  +  ++      V+ +   + ++L K T  G+ T AL
Sbjct: 132 LAKAIEDAQTKLAAAKALLADSEATVEQVEAQVAAVKAANEALGNELQKYTVDGLLTAAL 191

Query: 241 TKADPALESIYQRGKIFSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSE 297
               P   +   +      T+ +       A  + +         +  RD   A  E
Sbjct: 192 DTVAPDTTASTLKVGDGEGTLLDRTT---TATPSMSEPNGAAIAPHTLRDKVEATKE 245


>gi|225625032|gb|ACN96608.1| muramidase-released protein [Streptococcus suis]
          Length = 1268

 Score = 36.8 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 78/237 (32%), Gaps = 22/237 (9%)

Query: 80  YGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGG-SIALKAGTAGTMIAA 138
           YGT ++F    Y +G    +   +L++       +A   +     +IA     A T   A
Sbjct: 12  YGTKQQFSIRKYHFGAASVLLGVSLVLGAGTQVVKAEEAVTSSEPTIASSVAPASTEAVA 71

Query: 139 KEA-CTIAQAT----EKTAKLTALTKEGITSIRTIEGSSV-------------TIKSESI 180
           +E   T A+AT    E T+ +   + E   +   +E  +                  ++ 
Sbjct: 72  EEVDKTNAEATLVPAENTSAVATTSTEVEKAKAVLEQVTSESPLLAGLGQKELAKTEDAT 131

Query: 181 GTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKAL 240
             KA   +      +      +  +  ++      V+ +   + ++L K T  G+ T AL
Sbjct: 132 LAKAIEDAQTKLAAAKALLADSEATVEQVEAQVAAVKAANEALGNELQKYTVDGLLTAAL 191

Query: 241 TKADPALESIYQRGKIFSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSE 297
               P   +   +      T+ +       A  + +         +  RD   A  E
Sbjct: 192 DTVAPDTTASTLKVGDGEGTLLDRTT---TATPSMSEPNGAAIAPHTLRDKVEATKE 245


>gi|225624965|gb|ACN96585.1| muramidase-released protein [Streptococcus suis]
          Length = 1268

 Score = 36.8 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 78/237 (32%), Gaps = 22/237 (9%)

Query: 80  YGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGG-SIALKAGTAGTMIAA 138
           YGT ++F    Y +G    +   +L++       +A   +     +IA     A T   A
Sbjct: 12  YGTKQQFSIRKYHFGAASVLLGVSLVLGAGTQVVKAEEAVTSSEPTIASSVAPASTEAVA 71

Query: 139 KEA-CTIAQAT----EKTAKLTALTKEGITSIRTIEGSSV-------------TIKSESI 180
           +E   T A+AT    E T+ +   + E   +   +E  +                  ++ 
Sbjct: 72  EEVDKTNAEATLVPAENTSAVATTSTEVEKAKAVLEQVTSESPLLAGLGQKELAKTEDAT 131

Query: 181 GTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKAL 240
             KA   +      +      +  +  ++      V+ +   + ++L K T  G+ T AL
Sbjct: 132 LAKAIEDAQTKLAAAKALLADSEATVEQVEAQVAAVKAANEALGNELQKYTVDGLLTAAL 191

Query: 241 TKADPALESIYQRGKIFSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSE 297
               P   +   +      T+ +       A  + +         +  RD   A  E
Sbjct: 192 DTVAPDTTASTLKVGDGEGTLLDRTT---TATPSMSEPNGAAIAPHTLRDKVEATKE 245


>gi|225624931|gb|ACN96571.1| muramidase-released protein [Streptococcus suis]
 gi|225624935|gb|ACN96573.1| muramidase-released protein [Streptococcus suis]
          Length = 1268

 Score = 36.8 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 78/237 (32%), Gaps = 22/237 (9%)

Query: 80  YGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGG-SIALKAGTAGTMIAA 138
           YGT ++F    Y +G    +   +L++       +A   +     +IA     A T   A
Sbjct: 12  YGTKQQFSIRKYHFGAASVLLGVSLVLGAGTQVVKAEEAVTSSEPTIASSVAPASTEAVA 71

Query: 139 KEA-CTIAQAT----EKTAKLTALTKEGITSIRTIEGSSV-------------TIKSESI 180
           +E   T A+AT    E T+ +   + E   +   +E  +                  ++ 
Sbjct: 72  EEVDKTNAEATLVPAENTSAVATTSTEVEKAKAVLEQVTSESPLLAGLGQKELAKTEDAT 131

Query: 181 GTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKAL 240
             KA   +      +      +  +  ++      V+ +   + ++L K T  G+ T AL
Sbjct: 132 LAKAIEDAQTKLAAAKALLADSEATVEQVEAQVAAVKAANEALGNELQKYTVDGLLTAAL 191

Query: 241 TKADPALESIYQRGKIFSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSE 297
               P   +   +      T+ +       A  + +         +  RD   A  E
Sbjct: 192 DTVAPDTTASTLKVGDGEGTLLDRTT---TATPSMSEPNGAAIAPHTLRDKVEATKE 245


>gi|225624924|gb|ACN96569.1| muramidase-released protein [Streptococcus suis]
 gi|225624929|gb|ACN96570.1| muramidase-released protein [Streptococcus suis]
 gi|225624933|gb|ACN96572.1| muramidase-released protein [Streptococcus suis]
 gi|225624939|gb|ACN96575.1| muramidase-released protein [Streptococcus suis]
 gi|225624953|gb|ACN96579.1| muramidase-released protein [Streptococcus suis]
 gi|225624955|gb|ACN96580.1| muramidase-released protein [Streptococcus suis]
 gi|225624957|gb|ACN96581.1| muramidase-released protein [Streptococcus suis]
 gi|225624961|gb|ACN96583.1| muramidase-released protein [Streptococcus suis]
 gi|225624963|gb|ACN96584.1| muramidase-released protein [Streptococcus suis]
 gi|225624967|gb|ACN96586.1| muramidase-released protein [Streptococcus suis]
 gi|225624970|gb|ACN96587.1| muramidase-released protein [Streptococcus suis]
 gi|225624974|gb|ACN96589.1| muramidase-released protein [Streptococcus suis]
 gi|225624994|gb|ACN96597.1| muramidase-released protein [Streptococcus suis]
 gi|225624996|gb|ACN96598.1| muramidase-released protein [Streptococcus suis]
 gi|225625026|gb|ACN96606.1| muramidase-released protein [Streptococcus suis]
          Length = 1268

 Score = 36.8 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 78/237 (32%), Gaps = 22/237 (9%)

Query: 80  YGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGG-SIALKAGTAGTMIAA 138
           YGT ++F    Y +G    +   +L++       +A   +     +IA     A T   A
Sbjct: 12  YGTKQQFSIRKYHFGAASVLLGVSLVLGAGTQVVKAEEAVTSSEPTIASSVAPASTEAVA 71

Query: 139 KEA-CTIAQAT----EKTAKLTALTKEGITSIRTIEGSSV-------------TIKSESI 180
           +E   T A+AT    E T+ +   + E   +   +E  +                  ++ 
Sbjct: 72  EEVDKTNAEATLVPAENTSAVATTSTEVEKAKAVLEQVTSESPLLAGLGQKELAKTEDAT 131

Query: 181 GTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKAL 240
             KA   +      +      +  +  ++      V+ +   + ++L K T  G+ T AL
Sbjct: 132 LAKAIEDAQTKLAAAKALLADSEATVEQVEAQVAAVKAANEALGNELQKYTVDGLLTAAL 191

Query: 241 TKADPALESIYQRGKIFSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSE 297
               P   +   +      T+ +       A  + +         +  RD   A  E
Sbjct: 192 DTVAPDTTASTLKVGDGEGTLLDRTT---TATPSMSEPNGAAIAPHTLRDKVEATKE 245


>gi|225624920|gb|ACN96567.1| muramidase-released protein [Streptococcus suis]
 gi|225624922|gb|ACN96568.1| muramidase-released protein [Streptococcus suis]
 gi|225624981|gb|ACN96592.1| muramidase-released protein [Streptococcus suis]
          Length = 1268

 Score = 36.8 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 78/237 (32%), Gaps = 22/237 (9%)

Query: 80  YGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGG-SIALKAGTAGTMIAA 138
           YGT ++F    Y +G    +   +L++       +A   +     +IA     A T   A
Sbjct: 12  YGTKQQFSIRKYHFGAASVLLGVSLVLGAGTQVVKAEEAVTSSEPTIASSVAPASTEAVA 71

Query: 139 KEA-CTIAQAT----EKTAKLTALTKEGITSIRTIEGSSV-------------TIKSESI 180
           +E   T A+AT    E T+ +   + E   +   +E  +                  ++ 
Sbjct: 72  EEVDKTNAEATLVPAENTSAVATTSTEVEKAKAVLEQVTSESPLLAGLGQKELAKTEDAT 131

Query: 181 GTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKAL 240
             KA   +      +      +  +  ++      V+ +   + ++L K T  G+ T AL
Sbjct: 132 LAKAIEDAQTKLAAAKALLADSEATVEQVEAQVAAVKAANEALGNELQKYTVDGLLTAAL 191

Query: 241 TKADPALESIYQRGKIFSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSE 297
               P   +   +      T+ +       A  + +         +  RD   A  E
Sbjct: 192 DTVAPDTTASTLKVGDGEGTLLDRTT---TATPSMSEPNGAAIAPHTLRDKVEATKE 245


>gi|163800485|ref|ZP_02194386.1| hypothetical protein 1103602000595_AND4_07379 [Vibrio sp. AND4]
 gi|159175928|gb|EDP60722.1| hypothetical protein AND4_07379 [Vibrio sp. AND4]
          Length = 550

 Score = 36.8 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 40/103 (38%), Gaps = 12/103 (11%)

Query: 321 DNQFILDLNRASFIFNGKKLARDNSAEAIQKLMNQFAKNPKQLQLISSYANQSIFADSVV 380
             QF+ D NR +F  +  +++R+  +E     M+            S +A Q +FA  + 
Sbjct: 409 SKQFLDDFNRQTFRVDDVQISRNEDSEM--DDMSIMPTEA------SYFAQQELFAPVLE 460

Query: 381 HLMQSIPEFAKYASKSGSASKFTAKTLTNGEVAFTAKYTTKVQ 423
            LM+        +    S S F      +G +   A+    ++
Sbjct: 461 DLMKEH----GISPVGASKSTFNLYNKEDGTIELFAQLEKPLE 499


>gi|114565698|ref|YP_752852.1| N-acetylmuramoyl-L-alanine amidase [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
 gi|114336633|gb|ABI67481.1| N-acetylmuramoyl-L-alanine amidase [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
          Length = 907

 Score = 36.8 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 32/232 (13%), Positives = 68/232 (29%), Gaps = 13/232 (5%)

Query: 127 LKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEGITSIRTIEGSSVTIKSESIGTKASI 186
           + A  A        + +      +   L  L  EG      + G S    +  + +K ++
Sbjct: 101 VTADKANLRSGPSTSSSQVGQLRQGDSLILLDVEGEWYKVQVPGGSSAYIASFLVSKTAV 160

Query: 187 SSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKADPA 246
           ++ +++  +A SQ  T  +         V  +          +S P   + K  +  +  
Sbjct: 161 AANSSSTPAAGSQPETAATVPASSPAPAVTRQVEVISGPINIRSGPGESYPKLGSIDEKT 220

Query: 247 LESIYQRGKIFSNTIKNNAF---------IEKLAHTTKAIDKKIPFIGNQWRDINTAHSE 297
           +  +  +   +      N            E    ++  I        +       A S 
Sbjct: 221 VYPVISKEGEWYKIRLANGSDAYVAGWLVKESSMASSTVIPPAAASGSSAATGGTAAGST 280

Query: 298 FKMVPLSDQTLFRDFQGLCGKNIDNQFILDLNRASFIFNGKKLARDNSAEAI 349
              V L  Q L  +   +   +     +    RA F   G  +  DN+   +
Sbjct: 281 APRVFLDGQALSFEVPPIIENDRTLVPL----RAIFEALGATVDWDNATRTV 328


>gi|225624983|gb|ACN96593.1| muramidase-released protein [Streptococcus suis]
          Length = 1268

 Score = 36.8 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 78/237 (32%), Gaps = 22/237 (9%)

Query: 80  YGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGG-SIALKAGTAGTMIAA 138
           YGT ++F    Y +G    +   +L++       +A   +     +IA     A T   A
Sbjct: 12  YGTKQQFSIRKYHFGAASVLLGVSLVLGAGTQVVKAEEAVTSSEPTIASSVAPASTEAVA 71

Query: 139 KEA-CTIAQAT----EKTAKLTALTKEGITSIRTIEGSSV-------------TIKSESI 180
           +E   T A+AT    E T+ +   + E   +   +E  +                  ++ 
Sbjct: 72  EEVDKTNAEATLVPAENTSAVATTSTEVEKAKAVLEQVTSESPLLAGLGQKELAKTEDAT 131

Query: 181 GTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKAL 240
             KA   +      +      +  +  ++      V+ +   + ++L K T  G+ T AL
Sbjct: 132 LAKAIEDAQTKLAAAKALLADSEATVEQVEAQVAAVKAANEALGNELQKYTVDGLLTAAL 191

Query: 241 TKADPALESIYQRGKIFSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSE 297
               P   +   +      T+ +       A  + +         +  RD   A  E
Sbjct: 192 DTVAPDTTASTLKVGDGEGTLLDRTT---TATPSMSEPNGAAIAPHTLRDKVEATKE 245


>gi|270291701|ref|ZP_06197917.1| beta-N-acetylhexosaminidase [Streptococcus sp. M143]
 gi|270279786|gb|EFA25627.1| beta-N-acetylhexosaminidase [Streptococcus sp. M143]
          Length = 1336

 Score = 36.8 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 53/307 (17%), Positives = 93/307 (30%), Gaps = 47/307 (15%)

Query: 170 GSSVTIKSESIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSK 229
           G+ V        T  + S+  TA+      + +  S  E     +  EE  +      + 
Sbjct: 28  GTQVASADSVTPTPENPSTAQTAQGQPQDAETSVESKLEERGEAKNKEEKDASATLAPTV 87

Query: 230 STPQGIWTKALTKADPALESIYQRGKIFSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWR 289
              +           P  E +    K  S  +K    I++      A    +     +  
Sbjct: 88  EKTESPVVAEKADETPVAEKVTPVSKEQSEPVK----IDEEKKNEPATPAAVAPSTERAS 143

Query: 290 DINTAHSEFKMVPL-SDQTLFR-----------------DFQGLCGKNIDNQFILDLNRA 331
            +N   ++ KM+ + + +  F                  D   L G +   +F+LD    
Sbjct: 144 QVNEKLAKRKMISIDAGRKYFSPDQLKEIIDKAKHYGYTDLHLLVGND-GMRFMLD--DM 200

Query: 332 SFIFNGKKLARDNSAEAIQKLMNQFAKNPKQLQLISS-------YANQSIFA-------- 376
           +   NGK  A D+   A++   + + K+P    L  S       YA              
Sbjct: 201 TIKANGKTYASDDVKRALENGTDAYYKDPNGNHLTESQMTDLINYAKDKGIGLIPTVNSP 260

Query: 377 ---DSVVHLMQSI----PEFAKYASKSGSASKFTAKTLTNGEVAFTAKYTTKVQAVDKIA 429
              D+++H M+ +    P F  +  +S        K       A   KY         I 
Sbjct: 261 GHMDAILHAMKELGIQKPNFNYFGKESARTVDLDNKEAVEFTKALIDKYAAYFAGKSDIF 320

Query: 430 GKPLKEY 436
              L EY
Sbjct: 321 NIGLDEY 327


>gi|225624976|gb|ACN96590.1| muramidase-released protein [Streptococcus suis]
          Length = 1404

 Score = 36.8 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 78/237 (32%), Gaps = 22/237 (9%)

Query: 80  YGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGG-SIALKAGTAGTMIAA 138
           YGT ++F    Y +G    +   +L++       +A   +     +IA     A T   A
Sbjct: 12  YGTKQQFSIRKYHFGAASVLLGVSLVLGAGTQVVKAEEAVTSSEPTIASSVAPASTEAVA 71

Query: 139 KEA-CTIAQAT----EKTAKLTALTKEGITSIRTIEGSSV-------------TIKSESI 180
           +E   T A+AT    E T+ +   + E   +   +E  +                  ++ 
Sbjct: 72  EEVDKTNAEATLVPAENTSAVATTSTEVEKAKAVLEQVTSESPLLAGLGQKELAKTEDAT 131

Query: 181 GTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKAL 240
             KA   +      +      +  +  ++      V+ +   + ++L K T  G+ T AL
Sbjct: 132 LAKAIEDAQTKLAAAKALLADSEATVEQVEAQVAAVKAANEALGNELQKYTVDGLLTAAL 191

Query: 241 TKADPALESIYQRGKIFSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSE 297
               P   +   +      T+ +       A  + +         +  RD   A  E
Sbjct: 192 DTVAPDTTASTLKVGDGEGTLLDRTT---TATPSMSEPNGAAIAPHTLRDKVEATKE 245


>gi|225624937|gb|ACN96574.1| muramidase-released protein [Streptococcus suis]
          Length = 1540

 Score = 36.8 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 78/237 (32%), Gaps = 22/237 (9%)

Query: 80  YGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGG-SIALKAGTAGTMIAA 138
           YGT ++F    Y +G    +   +L++       +A   +     +IA     A T   A
Sbjct: 12  YGTKQQFSIRKYHFGAASVLLGVSLVLGAGTQVVKAEEAVTSSEPTIASSVAPASTEAVA 71

Query: 139 KEA-CTIAQAT----EKTAKLTALTKEGITSIRTIEGSSV-------------TIKSESI 180
           +E   T A+AT    E T+ +   + E   +   +E  +                  ++ 
Sbjct: 72  EEVDKTNAEATLVPAENTSAVATTSTEVEKAKAVLEQVTSESPLLAGLGQKELAKTEDAT 131

Query: 181 GTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKAL 240
             KA   +      +      +  +  ++      V+ +   + ++L K T  G+ T AL
Sbjct: 132 LAKAIEDAQTKLAAAKALLADSEATVEQVEAQVAAVKAANEALGNELQKYTVDGLLTAAL 191

Query: 241 TKADPALESIYQRGKIFSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSE 297
               P   +   +      T+ +       A  + +         +  RD   A  E
Sbjct: 192 DTVAPDTTASTLKVGDGEGTLLDRTT---TATPSMSEPNGAAIAPHTLRDKVEATKE 245


>gi|225624998|gb|ACN96599.1| muramidase-released protein [Streptococcus suis]
          Length = 1404

 Score = 36.8 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 78/237 (32%), Gaps = 22/237 (9%)

Query: 80  YGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGG-SIALKAGTAGTMIAA 138
           YGT ++F    Y +G    +   +L++       +A   +     +IA     A T   A
Sbjct: 12  YGTKQQFSIRKYHFGAASVLLGVSLVLGAGTQVVKAEEAVTSSEPTIASSVAPASTEAVA 71

Query: 139 KEA-CTIAQAT----EKTAKLTALTKEGITSIRTIEGSSV-------------TIKSESI 180
           +E   T A+AT    E T+ +   + E   +   +E  +                  ++ 
Sbjct: 72  EEVDKTNAEATLVPAENTSAVATTSTEVEKAKAVLEQVTSESPLLAGLGQKELAKTEDAT 131

Query: 181 GTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKAL 240
             KA   +      +      +  +  ++      V+ +   + ++L K T  G+ T AL
Sbjct: 132 LAKAIEDAQTKLAAAKALLADSEATVEQVEAQVAAVKAANEALGNELQKYTVDGLLTAAL 191

Query: 241 TKADPALESIYQRGKIFSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSE 297
               P   +   +      T+ +       A  + +         +  RD   A  E
Sbjct: 192 DTVAPDTTASTLKVGDGEGTLLDRTT---TATPSMSEPNGAAIAPHTLRDKVEATKE 245


>gi|307566355|ref|ZP_07628794.1| conserved domain protein [Prevotella amnii CRIS 21A-A]
 gi|307344932|gb|EFN90330.1| conserved domain protein [Prevotella amnii CRIS 21A-A]
          Length = 504

 Score = 36.8 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 53/119 (44%), Gaps = 3/119 (2%)

Query: 127 LKAGTAGT-MIAAKEACTIAQATEKTAKLTALTKEGITSIRTIEGSSVTIKSESIGTKAS 185
           L+  TA   M A++EA    +  +   K +    +   +I T+  + +TIKS SIG    
Sbjct: 49  LQLSTATLLMKASQEASI--KILQGNGKYSCKVIDSSIAIATLNNNVITIKSLSIGETEL 106

Query: 186 ISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTKAD 244
           I +   +++ A    +   + T+I    E+ +  I K  ++L     + +  + +T  D
Sbjct: 107 IVTDEDSKEQAKVNILVEETDTQIPDGVEIKDNVIKKWPAELIPEGGKIVLKEGITGID 165


>gi|225624909|gb|ACN96563.1| muramidase-released protein [Streptococcus suis]
 gi|225624972|gb|ACN96588.1| muramidase-released protein [Streptococcus suis]
 gi|225624985|gb|ACN96594.1| muramidase-released protein [Streptococcus suis]
 gi|225624989|gb|ACN96596.1| muramidase-released protein [Streptococcus suis]
 gi|225625022|gb|ACN96604.1| muramidase-released protein [Streptococcus suis]
 gi|225625024|gb|ACN96605.1| muramidase-released protein [Streptococcus suis]
 gi|225625030|gb|ACN96607.1| muramidase-released protein [Streptococcus suis]
 gi|225625034|gb|ACN96609.1| muramidase-released protein [Streptococcus suis]
          Length = 1540

 Score = 36.8 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 78/237 (32%), Gaps = 22/237 (9%)

Query: 80  YGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGG-SIALKAGTAGTMIAA 138
           YGT ++F    Y +G    +   +L++       +A   +     +IA     A T   A
Sbjct: 12  YGTKQQFSIRKYHFGAASVLLGVSLVLGAGTQVVKAEEAVTSSEPTIASSVAPASTEAVA 71

Query: 139 KEA-CTIAQAT----EKTAKLTALTKEGITSIRTIEGSSV-------------TIKSESI 180
           +E   T A+AT    E T+ +   + E   +   +E  +                  ++ 
Sbjct: 72  EEVDKTNAEATLVPAENTSAVATTSTEVEKAKAVLEQVTSESPLLAGLGQKELAKTEDAT 131

Query: 181 GTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKAL 240
             KA   +      +      +  +  ++      V+ +   + ++L K T  G+ T AL
Sbjct: 132 LAKAIEDAQTKLAAAKALLADSEATVEQVEAQVAAVKAANEALGNELQKYTVDGLLTAAL 191

Query: 241 TKADPALESIYQRGKIFSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSE 297
               P   +   +      T+ +       A  + +         +  RD   A  E
Sbjct: 192 DTVAPDTTASTLKVGDGEGTLLDRTT---TATPSMSEPNGAAIAPHTLRDKVEATKE 245


>gi|89898798|ref|YP_515908.1| wall surface anchor family protein [Chlamydophila felis Fe/C-56]
 gi|89332170|dbj|BAE81763.1| wall surface anchor family protein [Chlamydophila felis Fe/C-56]
          Length = 650

 Score = 36.8 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 46/260 (17%), Positives = 97/260 (37%), Gaps = 23/260 (8%)

Query: 57  QVIDISTKVKDVAVDVAVSMIPIYGTYREFKKGNYGW----GIVGAISDAALLIPVVGYG 112
           QV+D+ST+V     + A  +  I    +E  +G  G       +GAI+ AA     +  G
Sbjct: 394 QVVDLSTQVDSADAESAAQLQEIQQALQEALQGANGQEGATNALGAITTAAS----ISTG 449

Query: 113 ARAAINLVRGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTA---LTKEGITSIRTIE 169
           A  A    +GG+   +    G   +  ++   + +    A  +     ++    +   ++
Sbjct: 450 APIASA-NQGGAAVKQLYKTGFSSSTSKSYADSLSAGYGAYQSLSDIYSQSSAANREVLD 508

Query: 170 GSSVTIKSESIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEV--------VEESIS 221
            ++    + ++         N       ++ I  NS T     + V        V ++  
Sbjct: 509 RTATPALTRTVSRTEIRPRDNDTAAQRFARIIAGNSNTLGDVYSSVGVLQTLLGVLQNNP 568

Query: 222 KINSQLSKSTPQGIWTKALTKADPALESIYQRGKIFSNTIKN--NAFIEKLAHTTKAIDK 279
           + N +  K       TKA     P ++      + F + +++      ++LA   +A  +
Sbjct: 569 QANEEEIKQKLTSAVTKAPQSGYPYVQISNDSTQKFISKLEDEFARGSKRLAEAKEAAFE 628

Query: 280 KIP-FIGNQWRDINTAHSEF 298
           K P FI     +I + +S +
Sbjct: 629 KQPLFIQQVLVNIASLYSGY 648


>gi|108757878|ref|YP_635077.1| methyl-accepting chemotaxis protein [Myxococcus xanthus DK 1622]
 gi|108461758|gb|ABF86943.1| methyl-accepting chemotaxis protein [Myxococcus xanthus DK 1622]
          Length = 821

 Score = 36.4 bits (82), Expect = 8.7,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 77/197 (39%), Gaps = 18/197 (9%)

Query: 53  ASTEQVIDISTKVKDVAVD-------VAVSMIPIYGTYREFKKGNYGWGIVGAISDAALL 105
           AS+E+++   T++     D        A +   +  T  E  K     GIV   +D+  +
Sbjct: 121 ASSEELLASMTEMNATVADLVARNQSSAAATEQVAATAEEMAK-----GIVRLSTDSQGV 175

Query: 106 IPVVGYGARAAINLVRGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEGITSI 165
              V    +A   +VR    A +  T+        A T+    E+ A+      E   ++
Sbjct: 176 GERVAQVTQAVTGMVRSLGEASRDATSMASSVEDTAATV----EELARSVKGVAENARTL 231

Query: 166 RTIEGSSVTIKSESIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINS 225
            T   S+ +   E     +      TAEK+A + +    +  ++ ++ + V ++  +INS
Sbjct: 232 ETHSASTASSVEE--VAASVEEVAATAEKNAATVEANAATIEQLARSAQAVAKASEQINS 289

Query: 226 QLSKSTPQGIWTKALTK 242
             + S       +A T+
Sbjct: 290 LAAGSATASAQLEASTR 306


>gi|229017345|ref|ZP_04174248.1| Methyl-accepting chemotaxis protein [Bacillus cereus AH1273]
 gi|229023521|ref|ZP_04180017.1| Methyl-accepting chemotaxis protein [Bacillus cereus AH1272]
 gi|228737789|gb|EEL88289.1| Methyl-accepting chemotaxis protein [Bacillus cereus AH1272]
 gi|228743908|gb|EEL94007.1| Methyl-accepting chemotaxis protein [Bacillus cereus AH1273]
          Length = 660

 Score = 36.4 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 53/162 (32%), Gaps = 12/162 (7%)

Query: 98  AISDAALLIPVVGYGARAAINLVRGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTAL 157
            I         V   +      VR  S A +  T+     +  A T   + E  A L   
Sbjct: 353 LIGRINTSAGHVAAASEELTASVRQASEATEQITSAMDEISSGATTQTASVENGAMLLFD 412

Query: 158 TKEGITSIRTIEGSSVTIKSESIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVE 217
             EGI          V   S SI T    +S +T EK+   +K+   +  ++    E V 
Sbjct: 413 VTEGIQ--------HVATSSSSINT----ASAHTREKAEDGEKLVGKTVNQMQSIAESVS 460

Query: 218 ESISKINSQLSKSTPQGIWTKALTKADPALESIYQRGKIFSN 259
           +S + I    +KS   G   + +         +     I + 
Sbjct: 461 QSDAVIQLLNNKSKQIGDILEVIQNIADQTNLLALNAAIEAA 502


>gi|145219239|ref|YP_001129948.1| putative outer membrane adhesin like protein [Prosthecochloris
            vibrioformis DSM 265]
 gi|145205403|gb|ABP36446.1| putative outer membrane adhesin like protein [Chlorobium
            phaeovibrioides DSM 265]
          Length = 6112

 Score = 36.4 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 41/93 (44%), Gaps = 1/93 (1%)

Query: 131  TAGTMIAAKEACTIAQATEKTAKLTALTKEGITSIRTIEGSSVTIKSESIGTKASISSTN 190
            T GTM+    +       + T   T   KEG ++ ++        K   +    +I+ T 
Sbjct: 5139 TYGTMVLDATSGVWTYTLDNTLTATQALKEGESATQSYTARVTDDKGAYVDQTVTITITG 5198

Query: 191  TAEKSAISQKITTNSTTEIGKTTEVVEESISKI 223
            T + + + Q +T  S TE G+++   ++++S  
Sbjct: 5199 TND-APVLQAVTAGSITETGQSSATADQNLSGT 5230


>gi|325289320|ref|YP_004265501.1| methyl-accepting chemotaxis sensory transducer [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324964721|gb|ADY55500.1| methyl-accepting chemotaxis sensory transducer [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 596

 Score = 36.4 bits (82), Expect = 9.1,   Method: Composition-based stats.
 Identities = 27/194 (13%), Positives = 72/194 (37%), Gaps = 16/194 (8%)

Query: 53  ASTEQVIDISTKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGIVGAISDAALLIPVVGYG 112
           ++++Q+ +I+  ++D+A     +++ +       + GN G G      +   L       
Sbjct: 398 SASDQITNITKVIEDIAFQT--NILALNAAIEAARAGNAGKGFAVVADEVRNLAAKSAEA 455

Query: 113 ARAAINLVRGGSIALKAGTAGTMIAAK--------------EACTIAQATEKTAKLTALT 158
           A+    L++   + +  GT  T   A+                  I QA+ + A      
Sbjct: 456 AKQTAELIQASVVTVNKGTQTTAQTAQILHEVGEKAKMVNDSIIKIEQASAEQAGAIEQI 515

Query: 159 KEGITSIRTIEGSSVTIKSESIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEE 218
           KEG+  + ++  ++     E+  T   +S+     +  + +   ++   +    +  +  
Sbjct: 516 KEGLAQVSSVVQTNAATAEENSATSEEMSAQAATLQEEVGKFKLSDGYEQDRPVSSSLFR 575

Query: 219 SISKINSQLSKSTP 232
            + +  S L ++  
Sbjct: 576 ELPETRSGLLQAAA 589


>gi|309355014|emb|CAP39824.2| CBR-CLEC-223 protein [Caenorhabditis briggsae AF16]
          Length = 2419

 Score = 36.4 bits (82), Expect = 9.5,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 51/111 (45%)

Query: 123 GSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEGITSIRTIEGSSVTIKSESIGT 182
            S   +  ++ T      + T   ++  TA+ ++ T E  +S  T E SS T +  S  T
Sbjct: 578 SSSTTEVPSSSTTAEPSSSTTEVPSSSTTAEPSSSTTEVPSSSTTAEPSSSTTEVPSSST 637

Query: 183 KASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQ 233
           KA  SS+ T   S+ +    ++STTE+  ++   E S S      S +T +
Sbjct: 638 KAEPSSSTTEVPSSSTTAEPSSSTTEVPSSSTTAEPSSSTTEVPSSSTTAE 688



 Score = 36.4 bits (82), Expect = 9.5,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 51/111 (45%)

Query: 123  GSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEGITSIRTIEGSSVTIKSESIGT 182
             S   +  ++ T      + T   ++  TA+ ++ T E  +S  T E SS T +  S  T
Sbjct: 1026 SSSTTEVPSSSTTAEPSSSTTEVPSSSTTAEPSSSTTEVPSSSTTAEPSSSTTEVPSSST 1085

Query: 183  KASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQ 233
            KA  SS+ T   S+ +    ++STTE+  ++   E S S      S +T +
Sbjct: 1086 KAEPSSSTTEVPSSSTTAEPSSSTTEVPSSSTTAEPSSSTTEVPSSSTTAE 1136


>gi|115631695|ref|XP_781675.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115935242|ref|XP_001181523.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 660

 Score = 36.4 bits (82), Expect = 9.6,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 69/187 (36%), Gaps = 10/187 (5%)

Query: 124 SIALKAGTAGTMIAAKEAC----TIAQATEKTAKLTALTKEGITSIR----TIEGSSVTI 175
           +   +A TA T+    EA     T A+AT+K    +  T++  T+      T E  +  +
Sbjct: 271 TATDEANTAPTVATVPEATRIVTTEAKATQKGTTESKSTRQPTTAAETRLVTTETDTTRM 330

Query: 176 KSESIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGI 235
            S   GT    ++     +   ++  TT   T+ G TTE          ++    T +  
Sbjct: 331 VSTGAGTTQMATTKPVTTRLVTTETDTTQMVTQKG-TTESKSTRKPTTAAETRLVTTETD 389

Query: 236 WTKALTKADPALESIYQRGKIFS-NTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTA 294
            T+ +T      + + Q+G   S +T K      +L  T     + +       +   T 
Sbjct: 390 TTRLVTTETDTTQMVTQKGTTESKSTRKPTTAETRLVTTETDTTRMVSTAAGTTQMATTK 449

Query: 295 HSEFKMV 301
               ++V
Sbjct: 450 PVTTRLV 456


>gi|225624911|gb|ACN96564.1| muramidase-released protein [Streptococcus suis]
 gi|225624978|gb|ACN96591.1| truncated muramidase-released protein [Streptococcus suis]
 gi|225625009|gb|ACN96601.1| truncated muramidase-released protein [Streptococcus suis]
          Length = 707

 Score = 36.4 bits (82), Expect = 9.8,   Method: Composition-based stats.
 Identities = 39/237 (16%), Positives = 78/237 (32%), Gaps = 22/237 (9%)

Query: 80  YGTYREFKKGNYGWGIVGAISDAALLIPVVGYGARAAINLVRGG-SIALKAGTAGTMIAA 138
           YGT ++F    Y +G    +   +L++       +A   +     +IA     A T   A
Sbjct: 12  YGTKQQFSIRKYHFGAASVLLGVSLVLGAGTQVVKAEEAVTSSEPTIASSVAPASTEAVA 71

Query: 139 KEA-CTIAQAT----EKTAKLTALTKEGITSIRTIEGSSV-------------TIKSESI 180
           +E   T A+AT    E T+ +   + E   +   +E  +                  ++ 
Sbjct: 72  EEVDKTNAEATLVPAENTSAVATTSTEVEKAKAVLEQVTSESPLLAGLGQKELAKTEDAT 131

Query: 181 GTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKAL 240
             KA   +      +      +  +  ++      V+ +   + ++L K T  G+ T AL
Sbjct: 132 LAKAIEDAQTKLAAAKALLADSEATVEQVEAQVAAVKAANEALGNELQKYTVDGLLTAAL 191

Query: 241 TKADPALESIYQRGKIFSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSE 297
               P   +   +      T+ +       A  + +         +  RD   A  E
Sbjct: 192 DTVAPDTTASTLKVGDGEGTLLDRTT---TATPSMSEPNGAAIAPHTLRDKVEATKE 245


>gi|57234343|ref|YP_181629.1| Ser/Thr protein phosphatase family protein [Dehalococcoides
           ethenogenes 195]
 gi|57234886|ref|YP_181041.1| Ser/Thr protein phosphatase family protein [Dehalococcoides
           ethenogenes 195]
 gi|57234933|ref|YP_181018.1| Ser/Thr protein phosphatase family protein [Dehalococcoides
           ethenogenes 195]
 gi|57224791|gb|AAW39848.1| Ser/Thr protein phosphatase family protein [Dehalococcoides
           ethenogenes 195]
 gi|57225334|gb|AAW40391.1| Ser/Thr protein phosphatase family protein [Dehalococcoides
           ethenogenes 195]
 gi|57225381|gb|AAW40438.1| Ser/Thr protein phosphatase family protein [Dehalococcoides
           ethenogenes 195]
          Length = 1457

 Score = 36.4 bits (82), Expect = 9.8,   Method: Composition-based stats.
 Identities = 52/225 (23%), Positives = 81/225 (36%), Gaps = 10/225 (4%)

Query: 47  ELTQNKASTEQVIDISTKVKDVAVDVAVSMIPIYGTYREFKKGNYGWGI-VGAISDAALL 105
           E+ ++K      I       +V  D  + MIPI GT     KG+ G  I + A  D A  
Sbjct: 517 EMAESKEEFITRIIKQQNTGEVLKDFTIYMIPIVGTLYSIGKGDSGGQIALSAAIDVATF 576

Query: 106 IPVVGYGARAAINLVRGGSIALKAGTAGTMIAAKEACTIAQATEKTAKLTALTKEGITSI 165
           IP   +  +AA     G   A   G A  +   K   T       TAK+     E +   
Sbjct: 577 IP---FIGQAAAIARAGARPAAALGKA-ILAEVKAPLTSVLHPLATAKVALSPFETMIMP 632

Query: 166 RTIEGSSVTIKSESIGTKASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEES-ISKIN 224
           R I  SS  +   ++           A   A+  +IT  +    GKT +  +E   ++I 
Sbjct: 633 RKIPLSSAELSFHTVRLPVVDVGGKKALAMALRDEITKKAIA--GKTAKATKEGVTAEIQ 690

Query: 225 SQLSKSTPQGIWTKALTKADPALESIYQRGKIFSNTIKNNAFIEK 269
           +     T       A     P L+ +     +  + +K  A + K
Sbjct: 691 TTALNKTIAPAVISATPDVRPFLDGLTVG--VVKDDVKGAASVGK 733


>gi|145531815|ref|XP_001451674.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124419329|emb|CAK84277.1| unnamed protein product [Paramecium tetraurelia]
          Length = 504

 Score = 36.4 bits (82), Expect = 10.0,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 67/186 (36%), Gaps = 1/186 (0%)

Query: 183 KASISSTNTAEKSAISQKITTNSTTEIGKTTEVVEESISKINSQLSKSTPQGIWTKALTK 242
           +A         +  I      N +T +    +   ++    N Q +K        +   +
Sbjct: 74  RAFSQQKQIINQKCIKPDYKPNPSTNLQIDPQKDPQTNPSTNPQTNKQINPQTSPQTNPQ 133

Query: 243 ADPALESIYQRGKIFSNTIKNNAFIEKLAHTTKAIDKKIPFIGNQWRDINTAHSEFKMVP 302
           A+  +++  Q      +   NN   +KL   T  +        N  +   +   + K+  
Sbjct: 134 AEDQIDAEIQHDYDIKDISNNNDEYQKLLIYTNILFYYNKNQQNLEKQSQSQQGQHKIRG 193

Query: 303 LSDQTLFRDFQGLCGKNIDNQFILDLNRASFIFNGKKLARDNSAEAIQKLMNQFAKNPKQ 362
               TL+   Q       + +F++DLN+  F  +G+ +     +  + K+  +F +  + 
Sbjct: 194 KLYNTLYDHDQNPSYIIQEGEFLVDLNKKQFKLDGQGIEYQGKSNQV-KIQGEFKQGVQA 252

Query: 363 LQLISS 368
            ++ SS
Sbjct: 253 QRIPSS 258


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.306    0.114    0.267 

Lambda     K      H
   0.267   0.0354    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,608,106,471
Number of Sequences: 14124377
Number of extensions: 180211541
Number of successful extensions: 651177
Number of sequences better than 10.0: 857
Number of HSP's better than 10.0 without gapping: 367
Number of HSP's successfully gapped in prelim test: 1493
Number of HSP's that attempted gapping in prelim test: 641489
Number of HSP's gapped (non-prelim): 9623
length of query: 459
length of database: 4,842,793,630
effective HSP length: 143
effective length of query: 316
effective length of database: 2,823,007,719
effective search space: 892070439204
effective search space used: 892070439204
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 82 (36.4 bits)