HHsearch alignment for GI: 254780450 and conserved domain: COG0745
>COG0745 OmpR Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription].
Probab=99.86 E-value=3.3e-20 Score=160.40 Aligned_cols=116 Identities=29% Similarity=0.450 Sum_probs=102.8
Q ss_pred EEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHH-CCCCCEEEE
Q ss_conf 6999769889999999999988989999899899989998659995489985878898889999999986-899829999
Q gi|254780450|r 683 IVLLVEDEDSVRRGSKRMLETRGYTVHEAFSGTDALKVMEKLQGRVDIVISDVVMPEMDGPTLLRELRKT-YPSLKFIFI 761 (803)
Q Consensus 683 ~iLvvdD~~~~~~~~~~~L~~~g~~v~~a~~g~eal~~~~~~~~~~dlil~D~~mp~m~G~~~~~~ir~~-~~~~~ii~~ 761 (803)
T Consensus 2 ~ILiveDd~~i~~~l~~~L~~~G~~v~~~~~~~~a~~~~~~~---~dlviLD~~lP~~dG~~~~~~iR~~~~~~~PIi~L 78 (229)
T COG0745 2 RILLVEDDPELAELLKEYLEEEGYEVDVAADGEEALEAAREQ---PDLVLLDLMLPDLDGLELCRRLRAKKGSGPPIIVL 78 (229)
T ss_pred EEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCC---CCEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEE
T ss_conf 899991888999999999987597899978989999997269---99999988999856899999998516899988999
Q ss_pred ECCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCC
Q ss_conf 0678589987676057980750797999999999998513
Q gi|254780450|r 762 SGYAEDAFSKNLPKDAKFSFLSKPFSLKQLATSVHELLQS 801 (803)
Q Consensus 762 t~~~~~~~~~~~~~~~~~~~l~KP~~~~~L~~~i~~~L~~ 801 (803)
T Consensus 79 ta~~~~~d~v~gl~~GADDYl~KPf~~~EL~ARi~a~lRR 118 (229)
T COG0745 79 TARDDEEDRVLGLEAGADDYLTKPFSPRELLARLRALLRR 118 (229)
T ss_pred ECCCCHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHCC
T ss_conf 6687288899999756342334889989999999999673