HHsearch alignment for GI: 254780450 and conserved domain: COG2204

>COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].
Probab=99.89  E-value=6.8e-22  Score=172.23  Aligned_cols=119  Identities=33%  Similarity=0.519  Sum_probs=108.2

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEE
Q ss_conf             75699976988999999999998898999989989998999865999548998587889888999999998689982999
Q gi|254780450|r  681 SAIVLLVEDEDSVRRGSKRMLETRGYTVHEAFSGTDALKVMEKLQGRVDIVISDVVMPEMDGPTLLRELRKTYPSLKFIF  760 (803)
Q Consensus       681 ~~~iLvvdD~~~~~~~~~~~L~~~g~~v~~a~~g~eal~~~~~~~~~~dlil~D~~mp~m~G~~~~~~ir~~~~~~~ii~  760 (803)
T Consensus         4 ~~~iLvVDDd~~ir~~l~~~L~~~G~~v~~a~~~~~al~~i~~~--~~~lvl~Di~mp~~~Gl~ll~~i~~~~~~~pVI~   81 (464)
T COG2204           4 MARILVVDDDPDIRELLEQALELAGYEVVTAESAEEALEALSES--PFDLVLLDIRMPGMDGLELLKEIKSRDPDLPVIV   81 (464)
T ss_pred             CCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCC--CCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEE
T ss_conf             68789992978999999999997697489858999999998628--9998998167899966999999996389998899


Q ss_pred             EECCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCC
Q ss_conf             90678589987676057980750797999999999998513
Q gi|254780450|r  761 ISGYAEDAFSKNLPKDAKFSFLSKPFSLKQLATSVHELLQS  801 (803)
Q Consensus       761 ~t~~~~~~~~~~~~~~~~~~~l~KP~~~~~L~~~i~~~L~~  801 (803)
T Consensus        82 ~Tg~g~i~~AV~A~k~GA~Dfl~KP~~~~~L~~~v~ral~~  122 (464)
T COG2204          82 MTGHGDIDTAVEALRLGAFDFLEKPFDLDRLLAIVERALEL  122 (464)
T ss_pred             EECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf             82889999999998557033321899999999999999987