HHsearch alignment for GI: 254780450 and conserved domain: COG3437
>COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain [Transcription / Signal transduction mechanisms].
Probab=99.81 E-value=5.5e-19 Score=151.73 Aligned_cols=118 Identities=35% Similarity=0.537 Sum_probs=106.4
Q ss_pred CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCC---CC
Q ss_conf 875699976988999999999998898999989989998999865999548998587889888999999998689---98
Q gi|254780450|r 680 NSAIVLLVEDEDSVRRGSKRMLETRGYTVHEAFSGTDALKVMEKLQGRVDIVISDVVMPEMDGPTLLRELRKTYP---SL 756 (803)
Q Consensus 680 ~~~~iLvvdD~~~~~~~~~~~L~~~g~~v~~a~~g~eal~~~~~~~~~~dlil~D~~mp~m~G~~~~~~ir~~~~---~~ 756 (803)
T Consensus 13 ~~~~vl~vDD~~~~~~~~~~lL~~~~y~v~~ae~g~~a~kl~~~~~--~dlvllD~~mp~mdg~ev~~~lk~~~p~t~~i 90 (360)
T COG3437 13 EKLTVLLVDDEPDNLEALRQLLRMIGYRVIEAENGEEALKLLQEEP--PDLVLLDVRMPEMDGAEVLNKLKAMSPSTRRI 90 (360)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCC--CCEEEEECCCCCCCHHHHHHHHHHCCCCCCCC
T ss_conf 2014889658666899999999742641464147507788751168--85677642577765999999987249765653
Q ss_pred CEEEEECCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHH
Q ss_conf 2999906785899876760579807507979999999999985
Q gi|254780450|r 757 KFIFISGYAEDAFSKNLPKDAKFSFLSKPFSLKQLATSVHELL 799 (803)
Q Consensus 757 ~ii~~t~~~~~~~~~~~~~~~~~~~l~KP~~~~~L~~~i~~~L 799 (803)
T Consensus 91 p~i~lT~~~d~~~~~~~~~~g~~dyl~KP~~~~~l~~rv~~~~ 133 (360)
T COG3437 91 PVILLTAYADSEDRQRALEAGADDYLSKPISPKELVARVSSHL 133 (360)
T ss_pred CEEEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf 2599860587699999997247777528898899999999999