HHsearch alignment for GI: 254780450 and conserved domain: COG4191
>COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms].
Probab=100.00 E-value=1.4e-45 Score=338.69 Aligned_cols=236 Identities=33% Similarity=0.486 Sum_probs=204.5
Q ss_pred ECCCCCCCC-------CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH---HHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 502321122-------101234444446876303425664158999999999---9850799847888899999998888
Q gi|254780450|r 400 EITEQKALE-------ARMAQTQKLNAVGTLAGGIAHDFNNVLTAILLSSDH---LLLQSRSSDASFADLMEIKHNANRA 469 (803)
Q Consensus 400 DITerk~~E-------~~L~qa~~~~a~~~~~a~isHelr~pL~~I~g~~~l---l~~~~~~~~~~~~~l~~i~~~~~r~ 469 (803)
T Consensus 357 EIaer~~ae~~LR~~QdeLvQA~kLA~LGQmSA~iaHElNQPLaaiRt~adna~~lLer-gr~e~a~~Nl~~I~~LteRm 435 (603)
T COG4191 357 EIAEREQAEAALRRAQDELVQAGKLAALGQMSAGIAHELNQPLAAIRTYADNARLLLER-GRTEEARENLERISALTERM 435 (603)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHH
T ss_conf 99988878999998789999877789988888887887437089998677789999875-88677776799999999999
Q ss_pred HHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHHC
Q ss_conf 76430045421200584358534678999999998750356816999814897226998716999999998742276520
Q gi|254780450|r 470 AILVRQLLAFSRKQTMRLTVLNLTEVIGNLRMMIQKLISEPPQVKLTVDYERDLWGVKTDLSQFEQVLVNLCVNAHHAIM 549 (803)
Q Consensus 470 ~~li~~lLd~sr~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~D~~~l~qvl~NLl~NA~~A~~ 549 (803)
T Consensus 436 a~It~~Lk~FArk~~~a~~~v~l~~ai~~Al~ll~~R~-~~~~~~l~~~~~~~~~~V~~~~iRLeQVLvNLl~NALDA~~ 514 (603)
T COG4191 436 AAITAHLKSFARKSRDAAGPVSLREAIEGALELLRGRL-RAAGVELELDLPDAPLWVMANEIRLEQVLVNLLQNALDAMA 514 (603)
T ss_pred HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH-HCCCCEEECCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHC
T ss_conf 88999999983367666677657999999999988764-13676265048987755641322099999999998999845
Q ss_pred CCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 67885799999850421012245566788978999999788668844542023222210135776530388999998516
Q gi|254780450|r 550 LKESGSLTVRTRNIPSTEIHTFNYSDLPTKDMVLVEVEDTGIGMSPDIMEKIFEPFFTTKKVGEGTGLGLSVVYGIIRQS 629 (803)
Q Consensus 550 ~~~~G~v~i~~~~~~~~~~~~~~~~~~~~~~~v~i~V~D~G~GI~~~~~~~iFepF~ttk~~g~GtGLGL~i~~~iv~~~ 629 (803)
T Consensus 515 ~~~~~~i~i~~~~---------------~~~~v~l~VrDnGpGi~~e~~~~lFePF~TtK~~~~GLGLGLaIS~~i~~d~ 579 (603)
T COG4191 515 GQEDRRLSIRAQR---------------EGGQVVLTVRDNGPGIAPEALPHLFEPFFTTKPVGKGLGLGLAISQNIARDL 579 (603)
T ss_pred CCCCCEEEEEEEE---------------CCCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 8878716999871---------------5986999982699998978998613775036766677560289899899981
Q ss_pred CCEEEEEECCCCCEEEEEEECCC
Q ss_conf 75499996188942999994375
Q gi|254780450|r 630 GGYILPESEVGKGTIFRIFLPRY 652 (803)
Q Consensus 630 gG~i~v~S~~g~Gt~F~i~lP~~ 652 (803)
T Consensus 580 GGsL~v~n~~~~Ga~F~i~L~~a 602 (603)
T COG4191 580 GGSLEVANHPEGGASFTIELRRA 602 (603)
T ss_pred CCEEEEECCCCCCEEEEEEEECC
T ss_conf 88079402788844899996157