HHsearch alignment for GI: 254780450 and conserved domain: COG4567

>COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain [Signal transduction mechanisms / Transcription].

Probab=99.55  E-value=1.8e-13  Score=112.80  Aligned_cols=114  Identities=23%  Similarity=0.357  Sum_probs=101.7

Q ss_pred             EEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEE
Q ss_conf             69997698899999999999889899998998999899986599954899858788988899999999868998299990
Q gi|254780450|r  683 IVLLVEDEDSVRRGSKRMLETRGYTVHEAFSGTDALKVMEKLQGRVDIVISDVVMPEMDGPTLLRELRKTYPSLKFIFIS  762 (803)
Q Consensus       683 ~iLvvdD~~~~~~~~~~~L~~~g~~v~~a~~g~eal~~~~~~~~~~dlil~D~~mp~m~G~~~~~~ir~~~~~~~ii~~t  762 (803)
T Consensus        11 ~lllvdDD~~f~~~LaRa~e~RGf~v~~a~~~~eal~~art~~Pay--AvvDlkL~~gsGL~~i~~lr~~~~d~rivvLT   88 (182)
T COG4567          11 SLLLVDDDTPFLRTLARAMERRGFAVVTAESVEEALAAARTAPPAY--AVVDLKLGDGSGLAVIEALRERRADMRIVVLT   88 (182)
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCE--EEEEEEECCCCCHHHHHHHHHCCCCCEEEEEE
T ss_conf             0589618769999999998606862576144999999985179852--88986406887468999998249764389884


Q ss_pred             CCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHH
Q ss_conf             678589987676057980750797999999999998
Q gi|254780450|r  763 GYAEDAFSKNLPKDAKFSFLSKPFSLKQLATSVHEL  798 (803)
Q Consensus       763 ~~~~~~~~~~~~~~~~~~~l~KP~~~~~L~~~i~~~  798 (803)
T Consensus        89 Gy~sIATAV~AvKlGA~~YLaKPAdaDdi~aAl~~~  124 (182)
T COG4567          89 GYASIATAVEAVKLGACDYLAKPADADDILAALLRR  124 (182)
T ss_pred             CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC
T ss_conf             511799999999862455407977768999998602