HHsearch alignment for GI: 254780450 and conserved domain: COG4585
>COG4585 Signal transduction histidine kinase [Signal transduction mechanisms].
Probab=99.54 E-value=4.5e-12 Score=103.03 Aligned_cols=182 Identities=25% Similarity=0.334 Sum_probs=111.9
Q ss_pred HHHHHHHHHHHHHHHHHH-CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCC
Q ss_conf 641589999999999850-7998478888999999988887643004542120058435853467899999999875035
Q gi|254780450|r 431 FNNVLTAILLSSDHLLLQ-SRSSDASFADLMEIKHNANRAAILVRQLLAFSRKQTMRLTVLNLTEVIGNLRMMIQKLISE 509 (803)
Q Consensus 431 lr~pL~~I~g~~~ll~~~-~~~~~~~~~~l~~i~~~~~r~~~li~~lLd~sr~~~~~~~~~~l~~~i~~~~~~~~~~~~~ 509 (803)
T Consensus 182 v~q~L~~i~m~~~~~~~~~~~~~e~~~~~l~~i~~~~~e~l~evR~~-----v~~Lrp~~l~~~~l~~~l~~~~~~~~-~ 255 (365)
T COG4585 182 VGQSLTAISMLLALLLLLADEDAEKAQEELKEIEKLLREALQEVRAL-----VRDLRPVELEGLGLVEALRALLADFE-E 255 (365)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHCCCHHHHHHHHHHHHHHHHHHHH-H
T ss_conf 87999999999999887212684889999999999999999999999-----99719732212117999999999987-7
Q ss_pred CCCEEEEEECCCCCEEE-EECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEE
Q ss_conf 68169998148972269-98716999999998742276520678857999998504210122455667889789999997
Q gi|254780450|r 510 PPQVKLTVDYERDLWGV-KTDLSQFEQVLVNLCVNAHHAIMLKESGSLTVRTRNIPSTEIHTFNYSDLPTKDMVLVEVED 588 (803)
Q Consensus 510 ~~~i~~~~~~~~~~~~v-~~D~~~l~qvl~NLl~NA~~A~~~~~~G~v~i~~~~~~~~~~~~~~~~~~~~~~~v~i~V~D 588 (803)
T Consensus 256 ~~~~~~~~~~~~~~~~L~~~~e~~l~rivQEaltN---~~rHa~A~~v~V~l~~---------------~~~~l~l~V~D 317 (365)
T COG4585 256 RTGITVDLSLGSELERLPPEAEDALFRIVQEALTN---AIRHAQATEVRVTLER---------------TDDELRLEVID 317 (365)
T ss_pred HCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH---HHHCCCCCEEEEEEEE---------------CCCEEEEEEEE
T ss_conf 50837886157644679968999999999999989---9875784569999998---------------29889999998
Q ss_pred CCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEECC
Q ss_conf 886688445420232222101357765303889999985167549999618894299999437
Q gi|254780450|r 589 TGIGMSPDIMEKIFEPFFTTKKVGEGTGLGLSVVYGIIRQSGGYILPESEVGKGTIFRIFLPR 651 (803)
Q Consensus 589 ~G~GI~~~~~~~iFepF~ttk~~g~GtGLGL~i~~~iv~~~gG~i~v~S~~g~Gt~F~i~lP~ 651 (803)
T Consensus 318 nG~Gf~~~~~---------------~~~~GL~~mreRv~~lgG~l~i~S~~g~Gt~i~i~lPl 365 (365)
T COG4585 318 NGVGFDPDKE---------------GGGFGLLGMRERVEALGGTLTIDSAPGQGTTVTITLPL 365 (365)
T ss_pred CCCCCCCCCC---------------CCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEEC
T ss_conf 9978897645---------------77766766999999869989998559997799999509